RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 ACO2Q99798 780 aaKnown RBP13.62□□□□□ -0.23
SGCA-202ENST00000344627 CCDC94Q9BW85 323 aaPredicted RBP13.62□□□□□ -0.23
SGCA-202ENST00000344627 MRPL4Q9BYD3 311 aaKnown RBP13.62□□□□□ -0.23
SGCA-202ENST00000344627 CXCL16Q9H2A7 254 aa13.62□□□□□ -0.23
SGCA-202ENST00000344627 FBXW11Q9UKB1 542 aa13.62□□□□□ -0.23
SGCA-202ENST00000344627 RBM19Q9Y4C8 960 aaKnown RBP13.62□□□□□ -0.23
SGCA-202ENST00000344627 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.62□□□□□ -0.23
SGCA-202ENST00000344627 CITO14578 2027 aa13.61□□□□□ -0.23
SGCA-202ENST00000344627 STK25O00506 426 aa13.61□□□□□ -0.23
SGCA-202ENST00000344627 KIF4AO95239 1232 aa13.61□□□□□ -0.23
SGCA-202ENST00000344627 PLA2G4BP0C869 781 aa13.61□□□□□ -0.23
SGCA-202ENST00000344627 UBA7P41226 1012 aa13.61□□□□□ -0.23
SGCA-202ENST00000344627 SMTNP53814 917 aa13.61□□□□□ -0.23
SGCA-202ENST00000344627 PFKPQ01813 784 aa13.61□□□□□ -0.23
SGCA-202ENST00000344627 ANGPT1Q15389 498 aa13.61□□□□□ -0.23
SGCA-202ENST00000344627 PRSS55Q6UWB4 352 aaPredicted RBP13.61□□□□□ -0.23
SGCA-202ENST00000344627 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.61□□□□□ -0.23
SGCA-202ENST00000344627 ERMP1Q7Z2K6 904 aa13.61□□□□□ -0.23
SGCA-202ENST00000344627 DAW1Q8N136 415 aa13.61□□□□□ -0.23
SGCA-202ENST00000344627 CALML4Q96GE6 196 aa13.61□□□□□ -0.23
SGCA-202ENST00000344627 PNMA5Q96PV4 448 aa13.61□□□□□ -0.23
SGCA-202ENST00000344627 TIPINQ9BVW5 301 aa13.61□□□□□ -0.23
SGCA-202ENST00000344627 TARS2Q9BW92 718 aaKnown RBP13.61□□□□□ -0.23
SGCA-202ENST00000344627 TMEM134Q9H6X4 195 aa13.61□□□□□ -0.23
SGCA-202ENST00000344627 KCNH3Q9ULD8 1083 aa13.61□□□□□ -0.23
SGCA-202ENST00000344627 TNFSF13BQ9Y275 285 aa13.61□□□□□ -0.23
SGCA-202ENST00000344627 NPHP3-ACAD11A0A0J9YXS1 232 aa13.6□□□□□ -0.23
SGCA-202ENST00000344627 RFPL2O75678 378 aa13.6□□□□□ -0.23
SGCA-202ENST00000344627 B3GAT3O94766 335 aa13.6□□□□□ -0.23
SGCA-202ENST00000344627 FSHRP23945 695 aa13.6□□□□□ -0.23
SGCA-202ENST00000344627 PRKCQQ04759 706 aa13.6□□□□□ -0.23
SGCA-202ENST00000344627 RAB33AQ14088 237 aa13.6□□□□□ -0.23
SGCA-202ENST00000344627 PPM1LQ5SGD2 360 aa13.6□□□□□ -0.23
SGCA-202ENST00000344627 ARL6IP4Q66PJ3 421 aaKnown RBP13.6□□□□□ -0.23
SGCA-202ENST00000344627 DCLRE1AQ6PJP8 1040 aa13.6□□□□□ -0.23
SGCA-202ENST00000344627 ASCL5Q7RTU5 278 aa13.6□□□□□ -0.23
SGCA-202ENST00000344627 SYT2Q8N9I0 419 aaPredicted RBP13.6□□□□□ -0.23
SGCA-202ENST00000344627 DDX27Q96GQ7 796 aaKnown RBP13.6□□□□□ -0.23
SGCA-202ENST00000344627 MYADMQ96S97 322 aa13.6□□□□□ -0.23
SGCA-202ENST00000344627 OSBPL6Q9BZF3 934 aa13.6□□□□□ -0.23
SGCA-202ENST00000344627 CDT1Q9H211 546 aa13.6□□□□□ -0.23
SGCA-202ENST00000344627 SMOC2Q9H3U7 446 aa13.6□□□□□ -0.23
SGCA-202ENST00000344627 C17orf75Q9HAS0 396 aa13.6□□□□□ -0.23
SGCA-202ENST00000344627 TOPORSQ9NS56 1045 aaPredicted RBP13.6□□□□□ -0.23
SGCA-202ENST00000344627 CDH7Q9ULB5 785 aa13.6□□□□□ -0.23
SGCA-202ENST00000344627 SIT1Q9Y3P8 196 aa13.6□□□□□ -0.23
SGCA-202ENST00000344627 BACE2Q9Y5Z0 518 aa13.6□□□□□ -0.23
SGCA-202ENST00000344627 CACNA1HO95180 2353 aa13.6□□□□□ -0.23
SGCA-202ENST00000344627 N4BP1O75113 896 aaKnown RBP13.59□□□□□ -0.23
SGCA-202ENST00000344627 KRT18P05783 430 aaKnown RBP13.59□□□□□ -0.23
SGCA-202ENST00000344627 CFHP08603 1231 aa13.59□□□□□ -0.23
SGCA-202ENST00000344627 PLS3P13797 630 aa13.59□□□□□ -0.23
SGCA-202ENST00000344627 GUCY2CP25092 1073 aa13.59□□□□□ -0.23
SGCA-202ENST00000344627 GRM5P41594 1212 aa13.59□□□□□ -0.23
SGCA-202ENST00000344627 STARD6P59095 220 aa13.59□□□□□ -0.23
SGCA-202ENST00000344627 CACNB1Q02641 598 aaPredicted RBP13.59□□□□□ -0.23
SGCA-202ENST00000344627 MAPK7Q13164 816 aa13.59□□□□□ -0.23
SGCA-202ENST00000344627 HTR4Q13639 388 aa13.59□□□□□ -0.23
SGCA-202ENST00000344627 PSMD5Q16401 504 aa13.59□□□□□ -0.23
SGCA-202ENST00000344627 RTP2Q5QGT7 225 aa13.59□□□□□ -0.23
SGCA-202ENST00000344627 HYIQ5T013 277 aa13.59□□□□□ -0.23
SGCA-202ENST00000344627 MPZL3Q6UWV2 235 aa13.59□□□□□ -0.23
SGCA-202ENST00000344627 ANKS3Q6ZW76 656 aa13.59□□□□□ -0.23
SGCA-202ENST00000344627 GET4Q7L5D6 327 aaPredicted RBP13.59□□□□□ -0.23
SGCA-202ENST00000344627 BRAPQ7Z569 592 aa13.59□□□□□ -0.23
SGCA-202ENST00000344627 CEP120Q8N960 986 aa13.59□□□□□ -0.23
SGCA-202ENST00000344627 LNX1Q8TBB1 728 aaPredicted RBP13.59□□□□□ -0.23
SGCA-202ENST00000344627 BICD1Q96G01 975 aa13.59□□□□□ -0.23
SGCA-202ENST00000344627 ZBTB45Q96K62 511 aaPredicted RBP13.59□□□□□ -0.23
SGCA-202ENST00000344627 AK8Q96MA6 479 aa13.59□□□□□ -0.23
SGCA-202ENST00000344627 ACAP3Q96P50 834 aa13.59□□□□□ -0.23
SGCA-202ENST00000344627 NELL2Q99435 816 aa13.59□□□□□ -0.23
SGCA-202ENST00000344627 ZHX3Q9H4I2 956 aa13.59□□□□□ -0.23
SGCA-202ENST00000344627 AVENQ9NQS1 362 aaPredicted RBP13.59□□□□□ -0.23
SGCA-202ENST00000344627 ARHGEF3Q9NR81 526 aa13.59□□□□□ -0.23
SGCA-202ENST00000344627 SLC38A7Q9NVC3 462 aa13.59□□□□□ -0.23
SGCA-202ENST00000344627 ARHGAP28Q9P2N2 729 aa13.59□□□□□ -0.23
SGCA-202ENST00000344627 ANKFY1Q9P2R3 1169 aa13.59□□□□□ -0.23
SGCA-202ENST00000344627 MAFFQ9ULX9 164 aa13.59□□□□□ -0.23
SGCA-202ENST00000344627 DOCK6Q96HP0 2047 aa13.58□□□□□ -0.24
SGCA-202ENST00000344627 SMIM28A0A1B0GU29 152 aa13.58□□□□□ -0.24
SGCA-202ENST00000344627 BMP15O95972 392 aa13.58□□□□□ -0.24
SGCA-202ENST00000344627 LMNAP02545 664 aaKnown RBP13.58□□□□□ -0.24
SGCA-202ENST00000344627 C8AP07357 584 aa13.58□□□□□ -0.24
SGCA-202ENST00000344627 CLCNKBP51801 687 aa13.58□□□□□ -0.24
SGCA-202ENST00000344627 SLC12A3P55017 1021 aa13.58□□□□□ -0.24
SGCA-202ENST00000344627 SF3A1Q15459 793 aaKnown RBP13.58□□□□□ -0.24
SGCA-202ENST00000344627 TAS1R3Q7RTX0 852 aa13.58□□□□□ -0.24
SGCA-202ENST00000344627 FRMD5Q7Z6J6 570 aa13.58□□□□□ -0.24
SGCA-202ENST00000344627 GPBP1Q86WP2 473 aa13.58□□□□□ -0.24
SGCA-202ENST00000344627 CLSTN3Q9BQT9 956 aa13.58□□□□□ -0.24
SGCA-202ENST00000344627 TBC1D17Q9HA65 648 aa13.58□□□□□ -0.24
SGCA-202ENST00000344627 GOLGA2P5Q9HBQ8 144 aa13.58□□□□□ -0.24
SGCA-202ENST00000344627 VWA8A3KMH1 1905 aa13.57□□□□□ -0.24
SGCA-202ENST00000344627 MYO15AQ9UKN7 3530 aa13.57□□□□□ -0.24
SGCA-202ENST00000344627 KRBA1A5PL33 1030 aa13.57□□□□□ -0.24
SGCA-202ENST00000344627 I3L4J1 428 aa13.57□□□□□ -0.24
SGCA-202ENST00000344627 NCAM2O15394 837 aa13.57□□□□□ -0.24
SGCA-202ENST00000344627 PI15O43692 258 aa13.57□□□□□ -0.24
SGCA-202ENST00000344627 NARSO43776 548 aaKnown RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms