RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 MYBPC2Q14324 1141 aa6.47□□□□□ -1.37
VCAN-203ENST00000343200 KYNUQ16719 465 aa6.47□□□□□ -1.37
VCAN-203ENST00000343200 CCDC184Q52MB2 194 aa6.47□□□□□ -1.37
VCAN-203ENST00000343200 EGFL6Q8IUX8 553 aa6.47□□□□□ -1.37
VCAN-203ENST00000343200 TMEM79Q9BSE2 394 aa6.47□□□□□ -1.37
VCAN-203ENST00000343200 RANBP17Q9H2T7 1088 aaKnown RBP6.47□□□□□ -1.37
VCAN-203ENST00000343200 RXFP1Q9HBX9 757 aa6.47□□□□□ -1.37
VCAN-203ENST00000343200 EXOSC4Q9NPD3 245 aaKnown RBP6.47□□□□□ -1.37
VCAN-203ENST00000343200 TMCO1Q9UM00 188 aa6.47□□□□□ -1.37
VCAN-203ENST00000343200 FREM1Q5H8C1 2179 aa6.47□□□□□ -1.37
VCAN-203ENST00000343200 C5orf58C9J3I9 102 aa6.47□□□□□ -1.37
VCAN-203ENST00000343200 KLHL41O60662 606 aa6.47□□□□□ -1.37
VCAN-203ENST00000343200 RAB25P57735 213 aa6.47□□□□□ -1.37
VCAN-203ENST00000343200 KCNB1Q14721 858 aa6.47□□□□□ -1.37
VCAN-203ENST00000343200 DDR2Q16832 855 aa6.47□□□□□ -1.37
VCAN-203ENST00000343200 DPCR1Q3MIW9 517 aa6.47□□□□□ -1.37
VCAN-203ENST00000343200 P3H2Q8IVL5 708 aa6.47□□□□□ -1.37
VCAN-203ENST00000343200 DDIASQ8IXT1 998 aa6.47□□□□□ -1.37
VCAN-203ENST00000343200 ZNF496Q96IT1 587 aaPredicted RBP6.47□□□□□ -1.37
VCAN-203ENST00000343200 THAP9Q9H5L6 903 aa6.47□□□□□ -1.37
VCAN-203ENST00000343200 MOV10Q9HCE1 1003 aaKnown RBP6.47□□□□□ -1.37
VCAN-203ENST00000343200 EIF4G3O43432 1585 aaKnown RBP6.47□□□□□ -1.37
VCAN-203ENST00000343200 TRIM43BA6NCK2 446 aa6.47□□□□□ -1.37
VCAN-203ENST00000343200 RAB2AP61019 212 aa6.47□□□□□ -1.37
VCAN-203ENST00000343200 LRRC63Q05C16 580 aa6.47□□□□□ -1.37
VCAN-203ENST00000343200 MAN2A1Q16706 1144 aa6.47□□□□□ -1.37
VCAN-203ENST00000343200 SNX30Q5VWJ9 437 aa6.47□□□□□ -1.37
VCAN-203ENST00000343200 TMIEQ8NEW7 156 aa6.47□□□□□ -1.37
VCAN-203ENST00000343200 ZCCHC17Q9NP64 241 aaKnown RBP6.47□□□□□ -1.37
VCAN-203ENST00000343200 PSMC3IPQ9P2W1 217 aaPredicted RBP6.47□□□□□ -1.37
VCAN-203ENST00000343200 CTNNAL1Q9UBT7 734 aa6.47□□□□□ -1.37
VCAN-203ENST00000343200 TRMT112Q9UI30 125 aaKnown RBP6.47□□□□□ -1.37
VCAN-203ENST00000343200 VAV3Q9UKW4 847 aa6.47□□□□□ -1.37
VCAN-203ENST00000343200 DTNAQ9Y4J8 743 aa6.47□□□□□ -1.37
VCAN-203ENST00000343200 PRPSAP2O60256 369 aa6.47□□□□□ -1.37
VCAN-203ENST00000343200 RAP1GAPP47736 663 aa6.47□□□□□ -1.37
VCAN-203ENST00000343200 GPS1Q13098 491 aa6.47□□□□□ -1.37
VCAN-203ENST00000343200 PIGOQ8TEQ8 1089 aa6.47□□□□□ -1.37
VCAN-203ENST00000343200 TRABDQ9H4I3 376 aa6.47□□□□□ -1.37
VCAN-203ENST00000343200 TMOD3Q9NYL9 352 aa6.47□□□□□ -1.37
VCAN-203ENST00000343200 APOA4P06727 396 aa6.47□□□□□ -1.37
VCAN-203ENST00000343200 RXRAP19793 462 aa6.47□□□□□ -1.37
VCAN-203ENST00000343200 RABL6Q3YEC7 729 aaPredicted RBP6.47□□□□□ -1.37
VCAN-203ENST00000343200 TIMM50Q3ZCQ8 353 aa6.47□□□□□ -1.37
VCAN-203ENST00000343200 EPC2Q52LR7 807 aa6.47□□□□□ -1.37
VCAN-203ENST00000343200 DNAJC24Q6P3W2 148 aa6.47□□□□□ -1.37
VCAN-203ENST00000343200 TXNDC11Q6PKC3 985 aa6.47□□□□□ -1.37
VCAN-203ENST00000343200 PLA2G4DQ86XP0 818 aa6.47□□□□□ -1.37
VCAN-203ENST00000343200 BBS7Q8IWZ6 715 aa6.47□□□□□ -1.37
VCAN-203ENST00000343200 AK8Q96MA6 479 aa6.47□□□□□ -1.37
VCAN-203ENST00000343200 CALN1Q9BXU9 219 aa6.47□□□□□ -1.37
VCAN-203ENST00000343200 UBXN6Q9BZV1 441 aa6.47□□□□□ -1.37
VCAN-203ENST00000343200 NCOA5Q9HCD5 579 aaKnown RBP6.47□□□□□ -1.37
VCAN-203ENST00000343200 H2AFY2Q9P0M6 372 aaPredicted RBP6.47□□□□□ -1.37
VCAN-203ENST00000343200 WNK1Q9H4A3 2382 aa6.47□□□□□ -1.37
VCAN-203ENST00000343200 TDRD9Q8NDG6 1382 aaKnown RBP6.46□□□□□ -1.37
VCAN-203ENST00000343200 TRPM2O94759 1503 aa6.46□□□□□ -1.37
VCAN-203ENST00000343200 ABCC1P33527 1531 aa6.46□□□□□ -1.37
VCAN-203ENST00000343200 SPDYE5A6NIY4 337 aa6.46□□□□□ -1.37
VCAN-203ENST00000343200 ZNF879B4DU55 563 aa6.46□□□□□ -1.37
VCAN-203ENST00000343200 TEX28O15482 410 aa6.46□□□□□ -1.37
VCAN-203ENST00000343200 EIF2B5Q13144 721 aaKnown RBP6.46□□□□□ -1.37
VCAN-203ENST00000343200 ZFP69Q49AA0 526 aa6.46□□□□□ -1.37
VCAN-203ENST00000343200 FASTKD1Q53R41 847 aaKnown RBP6.46□□□□□ -1.37
VCAN-203ENST00000343200 C17orf80Q9BSJ5 609 aa6.46□□□□□ -1.37
VCAN-203ENST00000343200 OSBPL11Q9BXB4 747 aa6.46□□□□□ -1.37
VCAN-203ENST00000343200 POLR1BQ9H9Y6 1135 aa6.46□□□□□ -1.37
VCAN-203ENST00000343200 PCDHB4Q9Y5E5 795 aa6.46□□□□□ -1.37
VCAN-203ENST00000343200 K7ENM7 598 aa6.46□□□□□ -1.37
VCAN-203ENST00000343200 FTCDO95954 541 aa6.46□□□□□ -1.37
VCAN-203ENST00000343200 TTLL12Q14166 644 aaPredicted RBP6.46□□□□□ -1.37
VCAN-203ENST00000343200 SCYL2Q6P3W7 929 aa6.46□□□□□ -1.37
VCAN-203ENST00000343200 LRRC6Q86X45 466 aa6.46□□□□□ -1.37
VCAN-203ENST00000343200 RHPN2Q8IUC4 686 aa6.46□□□□□ -1.37
VCAN-203ENST00000343200 SAMD3Q8N6K7 520 aa6.46□□□□□ -1.37
VCAN-203ENST00000343200 SCFD1Q8WVM8 642 aa6.46□□□□□ -1.37
VCAN-203ENST00000343200 JADE3Q92613 823 aa6.46□□□□□ -1.37
VCAN-203ENST00000343200 MYRFQ9Y2G1 1151 aa6.46□□□□□ -1.37
VCAN-203ENST00000343200 LRRN2O75325 713 aa6.46□□□□□ -1.38
VCAN-203ENST00000343200 NR2F2P24468 414 aa6.46□□□□□ -1.38
VCAN-203ENST00000343200 EIF4A3P38919 411 aaKnown RBP6.46□□□□□ -1.38
VCAN-203ENST00000343200 MAGEA10P43363 369 aaPredicted RBP6.46□□□□□ -1.38
VCAN-203ENST00000343200 ADAM9Q13443 819 aa6.46□□□□□ -1.38
VCAN-203ENST00000343200 ZNF568Q3ZCX4 644 aa6.46□□□□□ -1.38
VCAN-203ENST00000343200 IFNEQ86WN2 208 aa6.46□□□□□ -1.38
VCAN-203ENST00000343200 ANKRD49Q8WVL7 239 aa6.46□□□□□ -1.38
VCAN-203ENST00000343200 KLHL32Q96NJ5 620 aa6.46□□□□□ -1.38
VCAN-203ENST00000343200 RTEL1Q9NZ71 1219 aa6.46□□□□□ -1.38
VCAN-203ENST00000343200 COL4A3BPQ9Y5P4 624 aa6.46□□□□□ -1.38
VCAN-203ENST00000343200 ATP6V1G2O95670 118 aa6.46□□□□□ -1.38
VCAN-203ENST00000343200 USP14P54578 494 aa6.46□□□□□ -1.38
VCAN-203ENST00000343200 ZSWIM7Q19AV6 140 aa6.46□□□□□ -1.38
VCAN-203ENST00000343200 AKIRIN2Q53H80 203 aa6.46□□□□□ -1.38
VCAN-203ENST00000343200 C2CD6Q53TS8 623 aa6.46□□□□□ -1.38
VCAN-203ENST00000343200 KCNT1Q5JUK3 1230 aa6.46□□□□□ -1.38
VCAN-203ENST00000343200 TCHHL1Q5QJ38 904 aaPredicted RBP6.46□□□□□ -1.38
VCAN-203ENST00000343200 ACAT2Q9BWD1 397 aa6.46□□□□□ -1.38
VCAN-203ENST00000343200 SLC12A5Q9H2X9 1139 aa6.46□□□□□ -1.38
VCAN-203ENST00000343200 MCM9Q9NXL9 1143 aa6.46□□□□□ -1.38
VCAN-203ENST00000343200 ITM2BQ9Y287 266 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms