RNA–Protein interactions for RNA: ENST00000343139.9

HLA-DQA1-201, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,591 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-201ENST00000343139 TNFSF9P41273 254 aa14.23□□□□□ -0.13
HLA-DQA1-201ENST00000343139 HYAL1Q12794 435 aa14.23□□□□□ -0.13
HLA-DQA1-201ENST00000343139 GLRA4Q5JXX5 417 aa14.23□□□□□ -0.13
HLA-DQA1-201ENST00000343139 C12orf56Q8IXR9 622 aa14.23□□□□□ -0.13
HLA-DQA1-201ENST00000343139 EFHBQ8N7U6 833 aa14.23□□□□□ -0.13
HLA-DQA1-201ENST00000343139 GLIS3Q8NEA6 775 aa14.23□□□□□ -0.13
HLA-DQA1-201ENST00000343139 GOLGA5Q8TBA6 731 aa14.23□□□□□ -0.13
HLA-DQA1-201ENST00000343139 PPM1EQ8WY54 764 aa14.23□□□□□ -0.13
HLA-DQA1-201ENST00000343139 HERC2P3Q9BVR0 1158 aa14.23□□□□□ -0.13
HLA-DQA1-201ENST00000343139 GTPBP4Q9BZE4 634 aaKnown RBP14.23□□□□□ -0.13
HLA-DQA1-201ENST00000343139 KIAA1586Q9HCI6 787 aa14.23□□□□□ -0.13
HLA-DQA1-201ENST00000343139 CHST7Q9NS84 486 aa14.23□□□□□ -0.13
HLA-DQA1-201ENST00000343139 THEGQ9P2T0 379 aa14.23□□□□□ -0.13
HLA-DQA1-201ENST00000343139 UBQLN1Q9UMX0 589 aaKnown RBP14.23□□□□□ -0.13
HLA-DQA1-201ENST00000343139 C2CD2Q9Y426 696 aa14.23□□□□□ -0.13
HLA-DQA1-201ENST00000343139 SF3B1O75533 1304 aaKnown RBP eCLIP14.22□□□□□ -0.13
HLA-DQA1-201ENST00000343139 C2orf71A6NGG8 1288 aa14.22□□□□□ -0.13
HLA-DQA1-201ENST00000343139 EXTL3O43909 919 aa14.22□□□□□ -0.13
HLA-DQA1-201ENST00000343139 LILRB3O75022 631 aa14.22□□□□□ -0.13
HLA-DQA1-201ENST00000343139 IL18RAPO95256 599 aa14.22□□□□□ -0.13
HLA-DQA1-201ENST00000343139 PAX3P23760 479 aa14.22□□□□□ -0.13
HLA-DQA1-201ENST00000343139 UBE2HP62256 183 aa14.22□□□□□ -0.13
HLA-DQA1-201ENST00000343139 STK4Q13043 487 aa14.22□□□□□ -0.13
HLA-DQA1-201ENST00000343139 DUSP6Q16828 381 aa14.22□□□□□ -0.13
HLA-DQA1-201ENST00000343139 KNOP1Q1ED39 458 aaKnown RBP14.22□□□□□ -0.13
HLA-DQA1-201ENST00000343139 AAK1Q2M2I8 961 aa14.22□□□□□ -0.13
HLA-DQA1-201ENST00000343139 SEZ6Q53EL9 994 aa14.22□□□□□ -0.13
HLA-DQA1-201ENST00000343139 ZBTB41Q5SVQ8 909 aa14.22□□□□□ -0.13
HLA-DQA1-201ENST00000343139 FUT10Q6P4F1 479 aa14.22□□□□□ -0.13
HLA-DQA1-201ENST00000343139 CRELD2Q6UXH1 353 aaPredicted RBP14.22□□□□□ -0.13
HLA-DQA1-201ENST00000343139 TMEM184AQ6ZMB5 413 aa14.22□□□□□ -0.13
HLA-DQA1-201ENST00000343139 HS2ST1Q7LGA3 356 aa14.22□□□□□ -0.13
HLA-DQA1-201ENST00000343139 SPATA20Q8TB22 786 aa14.22□□□□□ -0.13
HLA-DQA1-201ENST00000343139 SLC39A2Q9NP94 309 aa14.22□□□□□ -0.13
HLA-DQA1-201ENST00000343139 TCHHQ07283 1943 aa14.22□□□□□ -0.13
HLA-DQA1-201ENST00000343139 CASTOR2A6NHX0 329 aa14.22□□□□□ -0.13
HLA-DQA1-201ENST00000343139 LACTBL1A8MY62 500 aa14.22□□□□□ -0.13
HLA-DQA1-201ENST00000343139 TGFB1I1O43294 461 aa14.22□□□□□ -0.13
HLA-DQA1-201ENST00000343139 TRAPPC3O43617 180 aa14.22□□□□□ -0.13
HLA-DQA1-201ENST00000343139 TADA2AO75478 443 aa14.22□□□□□ -0.13
HLA-DQA1-201ENST00000343139 LRPAP1P30533 357 aa14.22□□□□□ -0.13
HLA-DQA1-201ENST00000343139 ACOT2P49753 483 aa14.22□□□□□ -0.13
HLA-DQA1-201ENST00000343139 DSG1Q02413 1049 aa14.22□□□□□ -0.13
HLA-DQA1-201ENST00000343139 SOX4Q06945 474 aaPredicted RBP14.22□□□□□ -0.13
HLA-DQA1-201ENST00000343139 ADAM15Q13444 863 aa14.22□□□□□ -0.13
HLA-DQA1-201ENST00000343139 KCNC3Q14003 757 aa14.22□□□□□ -0.13
HLA-DQA1-201ENST00000343139 SKIV2LQ15477 1246 aaKnown RBP14.22□□□□□ -0.13
HLA-DQA1-201ENST00000343139 PTPN14Q15678 1187 aa14.22□□□□□ -0.13
HLA-DQA1-201ENST00000343139 USP41Q3LFD5 358 aa14.22□□□□□ -0.13
HLA-DQA1-201ENST00000343139 PLPP4Q5VZY2 271 aa14.22□□□□□ -0.13
HLA-DQA1-201ENST00000343139 ARMCX5Q6P1M9 558 aa14.22□□□□□ -0.13
HLA-DQA1-201ENST00000343139 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.22□□□□□ -0.13
HLA-DQA1-201ENST00000343139 KIAA0895Q8NCT3 520 aa14.22□□□□□ -0.13
HLA-DQA1-201ENST00000343139 FBXL18Q96ME1 805 aa14.22□□□□□ -0.13
HLA-DQA1-201ENST00000343139 GSDMAQ96QA5 445 aa14.22□□□□□ -0.13
HLA-DQA1-201ENST00000343139 PAAF1Q9BRP4 392 aa14.22□□□□□ -0.13
HLA-DQA1-201ENST00000343139 CBWD1Q9BRT8 395 aa14.22□□□□□ -0.13
HLA-DQA1-201ENST00000343139 IKZF4Q9H2S9 585 aa14.22□□□□□ -0.13
HLA-DQA1-201ENST00000343139 TLE6Q9H808 572 aa14.22□□□□□ -0.13
HLA-DQA1-201ENST00000343139 UBE2ZQ9H832 354 aaPredicted RBP14.22□□□□□ -0.13
HLA-DQA1-201ENST00000343139 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.22□□□□□ -0.13
HLA-DQA1-201ENST00000343139 MRPL17Q9NRX2 175 aaKnown RBP14.22□□□□□ -0.13
HLA-DQA1-201ENST00000343139 AGPAT3Q9NRZ7 376 aa14.22□□□□□ -0.13
HLA-DQA1-201ENST00000343139 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.21□□□□□ -0.14
HLA-DQA1-201ENST00000343139 HIDE1A8MVS5 230 aa14.21□□□□□ -0.14
HLA-DQA1-201ENST00000343139 B3GAT3O94766 335 aa14.21□□□□□ -0.14
HLA-DQA1-201ENST00000343139 KIF4AO95239 1232 aa14.21□□□□□ -0.14
HLA-DQA1-201ENST00000343139 CXCL14O95715 111 aa14.21□□□□□ -0.14
HLA-DQA1-201ENST00000343139 URODP06132 367 aa14.21□□□□□ -0.14
HLA-DQA1-201ENST00000343139 PRR29P0C7W0 189 aa14.21□□□□□ -0.14
HLA-DQA1-201ENST00000343139 CLCNKBP51801 687 aa14.21□□□□□ -0.14
HLA-DQA1-201ENST00000343139 CREMQ03060 361 aa14.21□□□□□ -0.14
HLA-DQA1-201ENST00000343139 KIAA0319Q5VV43 1072 aa14.21□□□□□ -0.14
HLA-DQA1-201ENST00000343139 SPATA1Q5VX52 437 aa14.21□□□□□ -0.14
HLA-DQA1-201ENST00000343139 PDXDC1Q6P996 788 aa14.21□□□□□ -0.14
HLA-DQA1-201ENST00000343139 ADGRD2Q7Z7M1 963 aa14.21□□□□□ -0.14
HLA-DQA1-201ENST00000343139 BRSK2Q8IWQ3 736 aa14.21□□□□□ -0.14
HLA-DQA1-201ENST00000343139 GPD1LQ8N335 351 aa14.21□□□□□ -0.14
HLA-DQA1-201ENST00000343139 KIF12Q96FN5 646 aa14.21□□□□□ -0.14
HLA-DQA1-201ENST00000343139 GPR62Q9BZJ7 368 aa14.21□□□□□ -0.14
HLA-DQA1-201ENST00000343139 RXFP1Q9HBX9 757 aa14.21□□□□□ -0.14
HLA-DQA1-201ENST00000343139 RMND1Q9NWS8 449 aa14.21□□□□□ -0.14
HLA-DQA1-201ENST00000343139 F8W810 466 aa14.2□□□□□ -0.14
HLA-DQA1-201ENST00000343139 PODXLO00592 558 aa14.2□□□□□ -0.14
HLA-DQA1-201ENST00000343139 PDXKO00764 312 aa14.2□□□□□ -0.14
HLA-DQA1-201ENST00000343139 KINO60870 393 aaKnown RBP14.2□□□□□ -0.14
HLA-DQA1-201ENST00000343139 SMC2O95347 1197 aa14.2□□□□□ -0.14
HLA-DQA1-201ENST00000343139 SRGAP2BP0DMP2 458 aa14.2□□□□□ -0.14
HLA-DQA1-201ENST00000343139 NRIP1P48552 1158 aa14.2□□□□□ -0.14
HLA-DQA1-201ENST00000343139 GLUD2P49448 558 aa14.2□□□□□ -0.14
HLA-DQA1-201ENST00000343139 MRPS5P82675 430 aaKnown RBP14.2□□□□□ -0.14
HLA-DQA1-201ENST00000343139 MYBPC2Q14324 1141 aa14.2□□□□□ -0.14
HLA-DQA1-201ENST00000343139 COBLL1Q53SF7 1204 aa14.2□□□□□ -0.14
HLA-DQA1-201ENST00000343139 CD300LGQ6UXG3 332 aa14.2□□□□□ -0.14
HLA-DQA1-201ENST00000343139 PPFIBP1Q86W92 1011 aa14.2□□□□□ -0.14
HLA-DQA1-201ENST00000343139 SLC9A9Q8IVB4 645 aa14.2□□□□□ -0.14
HLA-DQA1-201ENST00000343139 GUF1Q8N442 669 aaKnown RBP14.2□□□□□ -0.14
HLA-DQA1-201ENST00000343139 FAM213AQ9BRX8 229 aa14.2□□□□□ -0.14
HLA-DQA1-201ENST00000343139 EMILIN2Q9BXX0 1053 aa14.2□□□□□ -0.14
HLA-DQA1-201ENST00000343139 HSPBP1Q9NZL4 362 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms