RNA–Protein interactions for RNA: ENST00000342220.9

COL18A1-201, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 3,386 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-201ENST00000342220 CD19P15391 556 aa14.01□□□□□ -0.17
COL18A1-201ENST00000342220 TCP1P17987 556 aaKnown RBP14.01□□□□□ -0.17
COL18A1-201ENST00000342220 EDNRBP24530 442 aa14.01□□□□□ -0.17
COL18A1-201ENST00000342220 ICAM3P32942 547 aa14.01□□□□□ -0.17
COL18A1-201ENST00000342220 ASTE1Q2TB18 679 aaPredicted RBP14.01□□□□□ -0.17
COL18A1-201ENST00000342220 ZNF792Q3KQV3 632 aa14.01□□□□□ -0.17
COL18A1-201ENST00000342220 OLFML2BQ68BL8 750 aa14.01□□□□□ -0.17
COL18A1-201ENST00000342220 TAPT1Q6NXT6 567 aa14.01□□□□□ -0.17
COL18A1-201ENST00000342220 MAP4K3Q8IVH8 894 aa14.01□□□□□ -0.17
COL18A1-201ENST00000342220 DNAJB3Q8WWF6 145 aa14.01□□□□□ -0.17
COL18A1-201ENST00000342220 TLR10Q9BXR5 811 aa14.01□□□□□ -0.17
COL18A1-201ENST00000342220 MTMR12Q9C0I1 747 aa14.01□□□□□ -0.17
COL18A1-201ENST00000342220 KLK14Q9P0G3 267 aa14.01□□□□□ -0.17
COL18A1-201ENST00000342220 DOCK1Q14185 1865 aa14.01□□□□□ -0.17
COL18A1-201ENST00000342220 DNAJC25-GNG10A0A024R161 153 aa14.01□□□□□ -0.17
COL18A1-201ENST00000342220 HBP1O60381 514 aa14.01□□□□□ -0.17
COL18A1-201ENST00000342220 STBD1O95210 358 aa14.01□□□□□ -0.17
COL18A1-201ENST00000342220 PRLRP16471 622 aa14.01□□□□□ -0.17
COL18A1-201ENST00000342220 COPB2P35606 906 aa14.01□□□□□ -0.17
COL18A1-201ENST00000342220 CCDC62Q6P9F0 684 aa14.01□□□□□ -0.17
COL18A1-201ENST00000342220 CATSPER4Q7RTX7 472 aa14.01□□□□□ -0.17
COL18A1-201ENST00000342220 ZNF572Q7Z3I7 529 aaPredicted RBP14.01□□□□□ -0.17
COL18A1-201ENST00000342220 OR5B17Q8NGF7 314 aa14.01□□□□□ -0.17
COL18A1-201ENST00000342220 FAXDC2Q96IV6 333 aa14.01□□□□□ -0.17
COL18A1-201ENST00000342220 FAM167AQ96KS9 214 aa14.01□□□□□ -0.17
COL18A1-201ENST00000342220 DHX33Q9H6R0 707 aaKnown RBP14.01□□□□□ -0.17
COL18A1-201ENST00000342220 GOLGA6CA6NDK9 693 aa14□□□□□ -0.17
COL18A1-201ENST00000342220 SERPING1P05155 500 aa14□□□□□ -0.17
COL18A1-201ENST00000342220 WEE2P0C1S8 567 aa14□□□□□ -0.17
COL18A1-201ENST00000342220 GOLGA6DP0CG33 693 aa14□□□□□ -0.17
COL18A1-201ENST00000342220 MUTP22033 750 aa14□□□□□ -0.17
COL18A1-201ENST00000342220 FKBP1BP68106 108 aa14□□□□□ -0.17
COL18A1-201ENST00000342220 MAP2K5Q13163 448 aa14□□□□□ -0.17
COL18A1-201ENST00000342220 DGKDQ16760 1214 aa14□□□□□ -0.17
COL18A1-201ENST00000342220 NT5C1BQ96P26 610 aa14□□□□□ -0.17
COL18A1-201ENST00000342220 IMPG2Q9BZV3 1241 aa14□□□□□ -0.17
COL18A1-201ENST00000342220 FAM107BQ9H098 131 aa14□□□□□ -0.17
COL18A1-201ENST00000342220 RBM12Q9NTZ6 932 aaKnown RBP14□□□□□ -0.17
COL18A1-201ENST00000342220 GOLGA6AQ9NYA3 693 aa14□□□□□ -0.17
COL18A1-201ENST00000342220 COL11A1P12107 1806 aaPredicted RBP14□□□□□ -0.17
COL18A1-201ENST00000342220 PJA2O43164 708 aa14□□□□□ -0.17
COL18A1-201ENST00000342220 CXCL8P10145 99 aa14□□□□□ -0.17
COL18A1-201ENST00000342220 CCT5P48643 541 aa14□□□□□ -0.17
COL18A1-201ENST00000342220 NCKAP1LP55160 1127 aa14□□□□□ -0.17
COL18A1-201ENST00000342220 GHRHRQ02643 423 aa14□□□□□ -0.17
COL18A1-201ENST00000342220 GRIK4Q16099 956 aa14□□□□□ -0.17
COL18A1-201ENST00000342220 BMT2Q1RMZ1 405 aa14□□□□□ -0.17
COL18A1-201ENST00000342220 NAA35Q5VZE5 725 aa14□□□□□ -0.17
COL18A1-201ENST00000342220 KRT39Q6A163 491 aa14□□□□□ -0.17
COL18A1-201ENST00000342220 FAM76AQ8TAV0 307 aa14□□□□□ -0.17
COL18A1-201ENST00000342220 PARD3BQ8TEW8 1205 aa14□□□□□ -0.17
COL18A1-201ENST00000342220 C1orf112Q9NSG2 853 aa14□□□□□ -0.17
COL18A1-201ENST00000342220 APEX2Q9UBZ4 518 aa14□□□□□ -0.17
COL18A1-201ENST00000342220 KIF3CO14782 793 aa14□□□□□ -0.17
COL18A1-201ENST00000342220 CYP2C9P11712 490 aa14□□□□□ -0.17
COL18A1-201ENST00000342220 TMEM270Q6UE05 265 aa14□□□□□ -0.17
COL18A1-201ENST00000342220 PALB2Q86YC2 1186 aa14□□□□□ -0.17
COL18A1-201ENST00000342220 TSEN2Q8NCE0 465 aaKnown RBP14□□□□□ -0.17
COL18A1-201ENST00000342220 MRPL4Q9BYD3 311 aaKnown RBP14□□□□□ -0.17
COL18A1-201ENST00000342220 PIK3R2O00459 728 aa13.99□□□□□ -0.17
COL18A1-201ENST00000342220 SLC16A3O15427 465 aaKnown RBP13.99□□□□□ -0.17
COL18A1-201ENST00000342220 PAFAH1B1P43034 410 aa13.99□□□□□ -0.17
COL18A1-201ENST00000342220 NAMPTP43490 491 aa13.99□□□□□ -0.17
COL18A1-201ENST00000342220 ITIH3Q06033 890 aa13.99□□□□□ -0.17
COL18A1-201ENST00000342220 BRDTQ58F21 947 aaPredicted RBP13.99□□□□□ -0.17
COL18A1-201ENST00000342220 USP37Q86T82 979 aa13.99□□□□□ -0.17
COL18A1-201ENST00000342220 KIAA0319LQ8IZA0 1049 aa13.99□□□□□ -0.17
COL18A1-201ENST00000342220 NOX5Q96PH1 765 aa13.99□□□□□ -0.17
COL18A1-201ENST00000342220 CD248Q9HCU0 757 aa13.99□□□□□ -0.17
COL18A1-201ENST00000342220 LUC7LQ9NQ29 371 aaKnown RBP13.99□□□□□ -0.17
COL18A1-201ENST00000342220 TAS2R14Q9NYV8 317 aa13.99□□□□□ -0.17
COL18A1-201ENST00000342220 PCDHB4Q9Y5E5 795 aa13.99□□□□□ -0.17
COL18A1-201ENST00000342220 MYH11P35749 1972 aa13.99□□□□□ -0.17
COL18A1-201ENST00000342220 LAMA3Q16787 3333 aa13.99□□□□□ -0.17
COL18A1-201ENST00000342220 SLC26A4O43511 780 aa13.99□□□□□ -0.17
COL18A1-201ENST00000342220 ADCY3O60266 1144 aa13.99□□□□□ -0.17
COL18A1-201ENST00000342220 SGPL1O95470 568 aa13.99□□□□□ -0.17
COL18A1-201ENST00000342220 PRKCZQ05513 592 aa13.99□□□□□ -0.17
COL18A1-201ENST00000342220 ATF7IP2Q5U623 682 aa13.99□□□□□ -0.17
COL18A1-201ENST00000342220 SLC47A2Q86VL8 602 aa13.99□□□□□ -0.17
COL18A1-201ENST00000342220 FBXL13Q8NEE6 735 aa13.99□□□□□ -0.17
COL18A1-201ENST00000342220 RAB20Q9NX57 234 aa13.99□□□□□ -0.17
COL18A1-201ENST00000342220 STIM2Q9P246 746 aa13.99□□□□□ -0.17
COL18A1-201ENST00000342220 PARP2Q9UGN5 583 aa13.99□□□□□ -0.17
COL18A1-201ENST00000342220 MAFO75444 373 aaPredicted RBP13.99□□□□□ -0.17
COL18A1-201ENST00000342220 PPP1R37O75864 691 aa13.99□□□□□ -0.17
COL18A1-201ENST00000342220 CYP24A1Q07973 514 aa13.99□□□□□ -0.17
COL18A1-201ENST00000342220 IER5Q5VY09 327 aa13.99□□□□□ -0.17
COL18A1-201ENST00000342220 C7orf31Q8N865 590 aa13.99□□□□□ -0.17
COL18A1-201ENST00000342220 GANQ9H2C0 597 aa13.99□□□□□ -0.17
COL18A1-201ENST00000342220 CTTNBP2NLQ9P2B4 639 aa13.99□□□□□ -0.17
COL18A1-201ENST00000342220 FAM169AQ9Y6X4 670 aa13.99□□□□□ -0.17
COL18A1-201ENST00000342220 SSU72P8A0A1W2PR75 194 aa13.98□□□□□ -0.17
COL18A1-201ENST00000342220 TMEM88BA6NKF7 163 aa13.98□□□□□ -0.17
COL18A1-201ENST00000342220 HLA-DRAP01903 254 aa13.98□□□□□ -0.17
COL18A1-201ENST00000342220 ALCAMQ13740 583 aa13.98□□□□□ -0.17
COL18A1-201ENST00000342220 TFDP1Q14186 410 aa13.98□□□□□ -0.17
COL18A1-201ENST00000342220 AMHR2Q16671 573 aa13.98□□□□□ -0.17
COL18A1-201ENST00000342220 C8orf74Q6P047 294 aa13.98□□□□□ -0.17
COL18A1-201ENST00000342220 RPUSD2Q8IZ73 545 aaKnown RBP13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms