RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 MYH7P12883 1935 aa12.79□□□□□ -0.36
ATXN3-201ENST00000340660 LRBAP50851 2863 aa12.79□□□□□ -0.36
ATXN3-201ENST00000340660 NF1P21359 2839 aa12.78□□□□□ -0.36
ATXN3-201ENST00000340660 NOTCH4Q99466 2003 aa12.78□□□□□ -0.36
ATXN3-201ENST00000340660 A0A0U1RQF3 1178 aa12.78□□□□□ -0.36
ATXN3-201ENST00000340660 F11P03951 625 aa12.78□□□□□ -0.36
ATXN3-201ENST00000340660 THBS1P07996 1170 aa12.78□□□□□ -0.36
ATXN3-201ENST00000340660 EIF2S3P41091 472 aaKnown RBP12.78□□□□□ -0.36
ATXN3-201ENST00000340660 TDO2P48775 406 aa12.78□□□□□ -0.36
ATXN3-201ENST00000340660 GHRHRQ02643 423 aa12.78□□□□□ -0.36
ATXN3-201ENST00000340660 USP4Q13107 963 aa12.78□□□□□ -0.36
ATXN3-201ENST00000340660 SERINC3Q13530 473 aa12.78□□□□□ -0.36
ATXN3-201ENST00000340660 LY6DQ14210 128 aa12.78□□□□□ -0.36
ATXN3-201ENST00000340660 KIZQ2M2Z5 673 aa12.78□□□□□ -0.36
ATXN3-201ENST00000340660 TRIM61Q5EBN2 209 aa12.78□□□□□ -0.36
ATXN3-201ENST00000340660 DGKKQ5KSL6 1271 aa12.78□□□□□ -0.36
ATXN3-201ENST00000340660 FOXR1Q6PIV2 292 aa12.78□□□□□ -0.36
ATXN3-201ENST00000340660 TXNDC11Q6PKC3 985 aa12.78□□□□□ -0.36
ATXN3-201ENST00000340660 MTHFD1LQ6UB35 978 aa12.78□□□□□ -0.36
ATXN3-201ENST00000340660 KIAA0319LQ8IZA0 1049 aa12.78□□□□□ -0.36
ATXN3-201ENST00000340660 MCRS1Q96EZ8 462 aa12.78□□□□□ -0.36
ATXN3-201ENST00000340660 ZSCAN10Q96SZ4 725 aaPredicted RBP12.78□□□□□ -0.36
ATXN3-201ENST00000340660 TRMT61BQ9BVS5 477 aaKnown RBP12.78□□□□□ -0.36
ATXN3-201ENST00000340660 GBP3Q9H0R5 595 aa12.78□□□□□ -0.36
ATXN3-201ENST00000340660 POLR3BQ9NW08 1133 aaPredicted RBP12.78□□□□□ -0.36
ATXN3-201ENST00000340660 PAG1Q9NWQ8 432 aa12.78□□□□□ -0.36
ATXN3-201ENST00000340660 HCFC1R1Q9NWW0 138 aa12.78□□□□□ -0.36
ATXN3-201ENST00000340660 NOP58Q9Y2X3 529 aaKnown RBP12.78□□□□□ -0.36
ATXN3-201ENST00000340660 MRPL11Q9Y3B7 192 aaKnown RBP12.78□□□□□ -0.36
ATXN3-201ENST00000340660 TSPY2A6NKD2 308 aa12.77□□□□□ -0.37
ATXN3-201ENST00000340660 CCL16O15467 120 aa12.77□□□□□ -0.37
ATXN3-201ENST00000340660 BCAR3O75815 825 aa12.77□□□□□ -0.37
ATXN3-201ENST00000340660 C1RP00736 705 aa12.77□□□□□ -0.37
ATXN3-201ENST00000340660 CELA2BP08218 269 aaPredicted RBP12.77□□□□□ -0.37
ATXN3-201ENST00000340660 CD59P13987 128 aa12.77□□□□□ -0.37
ATXN3-201ENST00000340660 GDI1P31150 447 aa12.77□□□□□ -0.37
ATXN3-201ENST00000340660 HOXA13P31271 388 aaPredicted RBP12.77□□□□□ -0.37
ATXN3-201ENST00000340660 IL12RB1P42701 662 aa12.77□□□□□ -0.37
ATXN3-201ENST00000340660 SOX9P48436 509 aa12.77□□□□□ -0.37
ATXN3-201ENST00000340660 CCINQ13939 588 aa12.77□□□□□ -0.37
ATXN3-201ENST00000340660 KRTAP21-3Q3LHN1 58 aa12.77□□□□□ -0.37
ATXN3-201ENST00000340660 GNPTABQ3T906 1256 aa12.77□□□□□ -0.37
ATXN3-201ENST00000340660 PMS2CLQ68D20 193 aa12.77□□□□□ -0.37
ATXN3-201ENST00000340660 TOGARAM2Q6ZUX3 1019 aa12.77□□□□□ -0.37
ATXN3-201ENST00000340660 TMPRSS7Q7RTY8 843 aa12.77□□□□□ -0.37
ATXN3-201ENST00000340660 SLCO6A1Q86UG4 719 aa12.77□□□□□ -0.37
ATXN3-201ENST00000340660 GLYCTKQ8IVS8 523 aa12.77□□□□□ -0.37
ATXN3-201ENST00000340660 WBP1Q96G27 269 aa12.77□□□□□ -0.37
ATXN3-201ENST00000340660 PCYT2Q99447 389 aa12.77□□□□□ -0.37
ATXN3-201ENST00000340660 TMEM47Q9BQJ4 181 aa12.77□□□□□ -0.37
ATXN3-201ENST00000340660 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.77□□□□□ -0.37
ATXN3-201ENST00000340660 UBA5Q9GZZ9 404 aa12.77□□□□□ -0.37
ATXN3-201ENST00000340660 SMARCAD1Q9H4L7 1026 aa12.77□□□□□ -0.37
ATXN3-201ENST00000340660 ETNK1Q9HBU6 452 aa12.77□□□□□ -0.37
ATXN3-201ENST00000340660 NOB1Q9ULX3 412 aaKnown RBP12.77□□□□□ -0.37
ATXN3-201ENST00000340660 AHCTF1Q8WYP5 2266 aa12.77□□□□□ -0.37
ATXN3-201ENST00000340660 ARNTLO00327 626 aa12.76□□□□□ -0.37
ATXN3-201ENST00000340660 FIBPO43427 364 aa12.76□□□□□ -0.37
ATXN3-201ENST00000340660 ZSCAN20P17040 1043 aaPredicted RBP12.76□□□□□ -0.37
ATXN3-201ENST00000340660 ADSSP30520 456 aa12.76□□□□□ -0.37
ATXN3-201ENST00000340660 GLUD2P49448 558 aa12.76□□□□□ -0.37
ATXN3-201ENST00000340660 CRYBB1P53674 252 aaPredicted RBP12.76□□□□□ -0.37
ATXN3-201ENST00000340660 HNRNPDQ14103 355 aaKnown RBP12.76□□□□□ -0.37
ATXN3-201ENST00000340660 OXLD1Q5BKU9 147 aa12.76□□□□□ -0.37
ATXN3-201ENST00000340660 RNF168Q8IYW5 571 aaPredicted RBP12.76□□□□□ -0.37
ATXN3-201ENST00000340660 NUCKS1Q9H1E3 243 aaKnown RBP12.76□□□□□ -0.37
ATXN3-201ENST00000340660 CHST12Q9NRB3 414 aa12.76□□□□□ -0.37
ATXN3-201ENST00000340660 MARCH5Q9NX47 278 aa12.76□□□□□ -0.37
ATXN3-201ENST00000340660 RTEL1Q9NZ71 1219 aa12.76□□□□□ -0.37
ATXN3-201ENST00000340660 KCNH3Q9ULD8 1083 aa12.76□□□□□ -0.37
ATXN3-201ENST00000340660 SSX2IPQ9Y2D8 614 aa12.76□□□□□ -0.37
ATXN3-201ENST00000340660 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.76□□□□□ -0.37
ATXN3-201ENST00000340660 SALL3Q9BXA9 1300 aa12.76□□□□□ -0.37
ATXN3-201ENST00000340660 ABCA7Q8IZY2 2146 aa12.76□□□□□ -0.37
ATXN3-201ENST00000340660 MEIS3P2A8K0S8 358 aa12.75□□□□□ -0.37
ATXN3-201ENST00000340660 RNF225M0QZC1 329 aaPredicted RBP12.75□□□□□ -0.37
ATXN3-201ENST00000340660 GPR32O75388 356 aa12.75□□□□□ -0.37
ATXN3-201ENST00000340660 EFEMP2O95967 443 aa12.75□□□□□ -0.37
ATXN3-201ENST00000340660 GOLGA8HP0CJ92 632 aa12.75□□□□□ -0.37
ATXN3-201ENST00000340660 SNHG28P0DPA3 235 aa12.75□□□□□ -0.37
ATXN3-201ENST00000340660 PHKA2P46019 1235 aa12.75□□□□□ -0.37
ATXN3-201ENST00000340660 KARSQ15046 597 aaKnown RBP12.75□□□□□ -0.37
ATXN3-201ENST00000340660 NOMO2Q5JPE7 1267 aa12.75□□□□□ -0.37
ATXN3-201ENST00000340660 ZNF574Q6ZN55 896 aaPredicted RBP12.75□□□□□ -0.37
ATXN3-201ENST00000340660 HDDC3Q8N4P3 179 aa12.75□□□□□ -0.37
ATXN3-201ENST00000340660 SEPT1Q8WYJ6 367 aa12.75□□□□□ -0.37
ATXN3-201ENST00000340660 PIGKQ92643 395 aa12.75□□□□□ -0.37
ATXN3-201ENST00000340660 LPPQ93052 612 aa12.75□□□□□ -0.37
ATXN3-201ENST00000340660 MBOAT7Q96N66 472 aa12.75□□□□□ -0.37
ATXN3-201ENST00000340660 SENP7Q9BQF6 1050 aa12.75□□□□□ -0.37
ATXN3-201ENST00000340660 FSCN3Q9NQT6 498 aa12.75□□□□□ -0.37
ATXN3-201ENST00000340660 GDE1Q9NZC3 331 aa12.75□□□□□ -0.37
ATXN3-201ENST00000340660 POLIQ9UNA4 740 aa12.75□□□□□ -0.37
ATXN3-201ENST00000340660 INPP5FQ9Y2H2 1132 aa12.75□□□□□ -0.37
ATXN3-201ENST00000340660 TLX3O43711 291 aaPredicted RBP12.74□□□□□ -0.37
ATXN3-201ENST00000340660 DDHD2O94830 711 aa12.74□□□□□ -0.37
ATXN3-201ENST00000340660 HNRNPA1P09651 372 aaKnown RBP eCLIP12.74□□□□□ -0.37
ATXN3-201ENST00000340660 TOP1P11387 765 aaKnown RBP12.74□□□□□ -0.37
ATXN3-201ENST00000340660 CR2P20023 1033 aa12.74□□□□□ -0.37
ATXN3-201ENST00000340660 GBP1P32455 592 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms