RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 RHOBTB2Q9BYZ6 727 aa14.58□□□□□ -0.08
SIRPB3P-201ENST00000340424 GPR62Q9BZJ7 368 aa14.58□□□□□ -0.08
SIRPB3P-201ENST00000340424 PLEKHA5Q9HAU0 1116 aa14.58□□□□□ -0.08
SIRPB3P-201ENST00000340424 CNTN3Q9P232 1028 aa14.58□□□□□ -0.08
SIRPB3P-201ENST00000340424 ANKFY1Q9P2R3 1169 aa14.58□□□□□ -0.08
SIRPB3P-201ENST00000340424 TBX20Q9UMR3 447 aa14.58□□□□□ -0.08
SIRPB3P-201ENST00000340424 F8W810 466 aa14.57□□□□□ -0.08
SIRPB3P-201ENST00000340424 C2CD2LO14523 706 aa14.57□□□□□ -0.08
SIRPB3P-201ENST00000340424 SPTLC2O15270 562 aa14.57□□□□□ -0.08
SIRPB3P-201ENST00000340424 TEX28O15482 410 aa14.57□□□□□ -0.08
SIRPB3P-201ENST00000340424 KIF4AO95239 1232 aa14.57□□□□□ -0.08
SIRPB3P-201ENST00000340424 GLUD1P00367 558 aa14.57□□□□□ -0.08
SIRPB3P-201ENST00000340424 GAP43P17677 238 aa14.57□□□□□ -0.08
SIRPB3P-201ENST00000340424 RPL9P32969 192 aaKnown RBP14.57□□□□□ -0.08
SIRPB3P-201ENST00000340424 STAT6P42226 847 aa14.57□□□□□ -0.08
SIRPB3P-201ENST00000340424 GTF2BQ00403 316 aa14.57□□□□□ -0.08
SIRPB3P-201ENST00000340424 HERC4Q5GLZ8 1057 aaPredicted RBP14.57□□□□□ -0.08
SIRPB3P-201ENST00000340424 SPECC1Q5M775 1068 aa14.57□□□□□ -0.08
SIRPB3P-201ENST00000340424 ATAT1Q5SQI0 421 aa14.57□□□□□ -0.08
SIRPB3P-201ENST00000340424 ASTLQ6HA08 431 aaPredicted RBP14.57□□□□□ -0.08
SIRPB3P-201ENST00000340424 DCLRE1AQ6PJP8 1040 aa14.57□□□□□ -0.08
SIRPB3P-201ENST00000340424 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.57□□□□□ -0.08
SIRPB3P-201ENST00000340424 C15orf39Q6ZRI6 1047 aa14.57□□□□□ -0.08
SIRPB3P-201ENST00000340424 USP49Q70CQ1 688 aa14.57□□□□□ -0.08
SIRPB3P-201ENST00000340424 TAS1R1Q7RTX1 841 aa14.57□□□□□ -0.08
SIRPB3P-201ENST00000340424 CEP120Q8N960 986 aa14.57□□□□□ -0.08
SIRPB3P-201ENST00000340424 CMASQ8NFW8 434 aaPredicted RBP14.57□□□□□ -0.08
SIRPB3P-201ENST00000340424 RIN2Q8WYP3 895 aaPredicted RBP14.57□□□□□ -0.08
SIRPB3P-201ENST00000340424 CLIC6Q96NY7 704 aa14.57□□□□□ -0.08
SIRPB3P-201ENST00000340424 IPO9Q96P70 1041 aaKnown RBP14.57□□□□□ -0.08
SIRPB3P-201ENST00000340424 PAAF1Q9BRP4 392 aa14.57□□□□□ -0.08
SIRPB3P-201ENST00000340424 TTPALQ9BTX7 342 aa14.57□□□□□ -0.08
SIRPB3P-201ENST00000340424 MFRPQ9BY79 579 aa14.57□□□□□ -0.08
SIRPB3P-201ENST00000340424 LRRC27Q9C0I9 530 aa14.57□□□□□ -0.08
SIRPB3P-201ENST00000340424 ZHX3Q9H4I2 956 aa14.57□□□□□ -0.08
SIRPB3P-201ENST00000340424 PLEKHA4Q9H4M7 779 aa14.57□□□□□ -0.08
SIRPB3P-201ENST00000340424 GPR37L1O60883 481 aa14.56□□□□□ -0.08
SIRPB3P-201ENST00000340424 B3GAT3O94766 335 aa14.56□□□□□ -0.08
SIRPB3P-201ENST00000340424 F13A1P00488 732 aa14.56□□□□□ -0.08
SIRPB3P-201ENST00000340424 CLTAP09496 248 aa14.56□□□□□ -0.08
SIRPB3P-201ENST00000340424 MATR3P43243 847 aaKnown RBP eCLIP14.56□□□□□ -0.08
SIRPB3P-201ENST00000340424 OSTNP61366 133 aa14.56□□□□□ -0.08
SIRPB3P-201ENST00000340424 UPP1Q16831 310 aa14.56□□□□□ -0.08
SIRPB3P-201ENST00000340424 GLRA4Q5JXX5 417 aa14.56□□□□□ -0.08
SIRPB3P-201ENST00000340424 TMEM31Q5JXX7 168 aa14.56□□□□□ -0.08
SIRPB3P-201ENST00000340424 RNF135Q8IUD6 432 aa14.56□□□□□ -0.08
SIRPB3P-201ENST00000340424 MAP4K3Q8IVH8 894 aa14.56□□□□□ -0.08
SIRPB3P-201ENST00000340424 KCNG4Q8TDN1 519 aa14.56□□□□□ -0.08
SIRPB3P-201ENST00000340424 PIK3R5Q8WYR1 880 aa14.56□□□□□ -0.08
SIRPB3P-201ENST00000340424 DDX12PQ92771 950 aa14.56□□□□□ -0.08
SIRPB3P-201ENST00000340424 DCBLD2Q96PD2 775 aa14.56□□□□□ -0.08
SIRPB3P-201ENST00000340424 CUEDC2Q9H467 287 aa14.56□□□□□ -0.08
SIRPB3P-201ENST00000340424 EPHX3Q9H6B9 360 aa14.56□□□□□ -0.08
SIRPB3P-201ENST00000340424 CITO14578 2027 aa14.56□□□□□ -0.08
SIRPB3P-201ENST00000340424 ATMINO43313 823 aaPredicted RBP14.55□□□□□ -0.08
SIRPB3P-201ENST00000340424 CUTAO60888 179 aa14.55□□□□□ -0.08
SIRPB3P-201ENST00000340424 PAPLNO95428 1278 aa14.55□□□□□ -0.08
SIRPB3P-201ENST00000340424 HARSP12081 509 aaKnown RBP14.55□□□□□ -0.08
SIRPB3P-201ENST00000340424 CLCNKBP51801 687 aa14.55□□□□□ -0.08
SIRPB3P-201ENST00000340424 RARS2Q5T160 578 aaKnown RBP14.55□□□□□ -0.08
SIRPB3P-201ENST00000340424 FAM171A1Q5VUB5 890 aa14.55□□□□□ -0.08
SIRPB3P-201ENST00000340424 GPR149Q86SP6 731 aa14.55□□□□□ -0.08
SIRPB3P-201ENST00000340424 KHSRPQ92945 711 aaKnown RBP eCLIP14.55□□□□□ -0.08
SIRPB3P-201ENST00000340424 ZBTB45Q96K62 511 aaPredicted RBP14.55□□□□□ -0.08
SIRPB3P-201ENST00000340424 RPGRIP1Q96KN7 1286 aa14.55□□□□□ -0.08
SIRPB3P-201ENST00000340424 FIZ1Q96SL8 496 aa14.55□□□□□ -0.08
SIRPB3P-201ENST00000340424 APOL5Q9BWW9 433 aa14.55□□□□□ -0.08
SIRPB3P-201ENST00000340424 MAN1C1Q9NR34 630 aa14.55□□□□□ -0.08
SIRPB3P-201ENST00000340424 CFAP45Q9UL16 551 aa14.55□□□□□ -0.08
SIRPB3P-201ENST00000340424 USTQ9Y2C2 406 aa14.55□□□□□ -0.08
SIRPB3P-201ENST00000340424 OGTO15294 1046 aa14.54□□□□□ -0.08
SIRPB3P-201ENST00000340424 XPOTO43592 962 aaKnown RBP14.54□□□□□ -0.08
SIRPB3P-201ENST00000340424 FGFR3P22607 806 aa14.54□□□□□ -0.08
SIRPB3P-201ENST00000340424 POU5F1Q01860 360 aaKnown RBP14.54□□□□□ -0.08
SIRPB3P-201ENST00000340424 PPP2R3AQ06190 1150 aa14.54□□□□□ -0.08
SIRPB3P-201ENST00000340424 ALCAMQ13740 583 aa14.54□□□□□ -0.08
SIRPB3P-201ENST00000340424 PSMD5Q16401 504 aa14.54□□□□□ -0.08
SIRPB3P-201ENST00000340424 SLC10A6Q3KNW5 377 aa14.54□□□□□ -0.08
SIRPB3P-201ENST00000340424 RTP2Q5QGT7 225 aa14.54□□□□□ -0.08
SIRPB3P-201ENST00000340424 SLFN12LQ6IEE8 588 aa14.54□□□□□ -0.08
SIRPB3P-201ENST00000340424 ZNF720Q7Z2F6 126 aa14.54□□□□□ -0.08
SIRPB3P-201ENST00000340424 CD302Q8IX05 232 aa14.54□□□□□ -0.08
SIRPB3P-201ENST00000340424 HASPINQ8TF76 798 aa14.54□□□□□ -0.08
SIRPB3P-201ENST00000340424 RABGGTAQ92696 567 aa14.54□□□□□ -0.08
SIRPB3P-201ENST00000340424 CXCL16Q9H2A7 254 aa14.54□□□□□ -0.08
SIRPB3P-201ENST00000340424 TNMDQ9H2S6 317 aa14.54□□□□□ -0.08
SIRPB3P-201ENST00000340424 POMKQ9H5K3 350 aa14.54□□□□□ -0.08
SIRPB3P-201ENST00000340424 MAGEF1Q9HAY2 307 aa14.54□□□□□ -0.08
SIRPB3P-201ENST00000340424 OLFML3Q9NRN5 406 aa14.54□□□□□ -0.08
SIRPB3P-201ENST00000340424 ZDHHC7Q9NXF8 308 aa14.54□□□□□ -0.08
SIRPB3P-201ENST00000340424 CACNG4Q9UBN1 327 aa14.54□□□□□ -0.08
SIRPB3P-201ENST00000340424 EXOC7Q9UPT5 735 aa14.54□□□□□ -0.08
SIRPB3P-201ENST00000340424 TRIP11Q15643 1979 aa14.53□□□□□ -0.08
SIRPB3P-201ENST00000340424 A0A0B4J269 797 aa14.53□□□□□ -0.08
SIRPB3P-201ENST00000340424 TTC26A0AVF1 554 aa14.53□□□□□ -0.08
SIRPB3P-201ENST00000340424 FRMD3A2A2Y4 597 aa14.53□□□□□ -0.08
SIRPB3P-201ENST00000340424 MYMKA6NI61 221 aa14.53□□□□□ -0.08
SIRPB3P-201ENST00000340424 PRR33A8MZF0 331 aa14.53□□□□□ -0.08
SIRPB3P-201ENST00000340424 PODXLO00592 558 aa14.53□□□□□ -0.08
SIRPB3P-201ENST00000340424 CYP3A5P20815 502 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms