RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 FAM47DPA6NHR8 397 aa15.02■□□□□ -0
PCDH8-201ENST00000338862 CCND1P24385 295 aa15.02■□□□□ -0
PCDH8-201ENST00000338862 JAM2P57087 298 aa15.02■□□□□ -0
PCDH8-201ENST00000338862 LVRNQ6Q4G3 990 aa15.02■□□□□ -0
PCDH8-201ENST00000338862 TMEM179Q6ZVK1 233 aa15.02■□□□□ -0
PCDH8-201ENST00000338862 MTDHQ86UE4 582 aaKnown RBP15.02■□□□□ -0
PCDH8-201ENST00000338862 EPS8L1Q8TE68 723 aa15.02■□□□□ -0
PCDH8-201ENST00000338862 JDP2Q8WYK2 163 aa15.02■□□□□ -0
PCDH8-201ENST00000338862 CPSF2Q9P2I0 782 aaKnown RBP15.02■□□□□ -0
PCDH8-201ENST00000338862 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.02□□□□□ -0.01
PCDH8-201ENST00000338862 ARHGAP42A6NI28 874 aa15.02□□□□□ -0.01
PCDH8-201ENST00000338862 CES2O00748 559 aa15.02□□□□□ -0.01
PCDH8-201ENST00000338862 MGRN1O60291 552 aa15.02□□□□□ -0.01
PCDH8-201ENST00000338862 ZBED4O75132 1171 aa15.02□□□□□ -0.01
PCDH8-201ENST00000338862 CLUL1Q15846 466 aa15.02□□□□□ -0.01
PCDH8-201ENST00000338862 KRT39Q6A163 491 aa15.02□□□□□ -0.01
PCDH8-201ENST00000338862 CCDC62Q6P9F0 684 aa15.02□□□□□ -0.01
PCDH8-201ENST00000338862 C1orf186Q6ZWK4 172 aa15.02□□□□□ -0.01
PCDH8-201ENST00000338862 SLFN11Q7Z7L1 901 aa15.02□□□□□ -0.01
PCDH8-201ENST00000338862 ATL2Q8NHH9 583 aa15.02□□□□□ -0.01
PCDH8-201ENST00000338862 PYROXD1Q8WU10 500 aa15.02□□□□□ -0.01
PCDH8-201ENST00000338862 DCAF4Q8WV16 495 aa15.02□□□□□ -0.01
PCDH8-201ENST00000338862 RSAD2Q8WXG1 361 aa15.02□□□□□ -0.01
PCDH8-201ENST00000338862 GYG2O15488 501 aa15.02□□□□□ -0.01
PCDH8-201ENST00000338862 KRT4P19013 534 aa15.02□□□□□ -0.01
PCDH8-201ENST00000338862 MARSP56192 900 aaKnown RBP15.02□□□□□ -0.01
PCDH8-201ENST00000338862 MPP2Q14168 576 aa15.02□□□□□ -0.01
PCDH8-201ENST00000338862 KCNT1Q5JUK3 1230 aa15.02□□□□□ -0.01
PCDH8-201ENST00000338862 ARHGAP27Q6ZUM4 889 aa15.02□□□□□ -0.01
PCDH8-201ENST00000338862 TRMT10CQ7L0Y3 403 aaKnown RBP15.02□□□□□ -0.01
PCDH8-201ENST00000338862 CALN1Q9BXU9 219 aa15.02□□□□□ -0.01
PCDH8-201ENST00000338862 OSBPL8Q9BZF1 889 aa15.02□□□□□ -0.01
PCDH8-201ENST00000338862 SHCBP1LQ9BZQ2 653 aa15.02□□□□□ -0.01
PCDH8-201ENST00000338862 TMEM206Q9H813 350 aa15.02□□□□□ -0.01
PCDH8-201ENST00000338862 RAVER2Q9HCJ3 691 aaKnown RBP15.02□□□□□ -0.01
PCDH8-201ENST00000338862 MAGED2Q9UNF1 606 aaPredicted RBP15.02□□□□□ -0.01
PCDH8-201ENST00000338862 SNED1Q8TER0 1413 aa15.02□□□□□ -0.01
PCDH8-201ENST00000338862 C2orf71A6NGG8 1288 aa15.01□□□□□ -0.01
PCDH8-201ENST00000338862 NUDT17P0C025 328 aa15.01□□□□□ -0.01
PCDH8-201ENST00000338862 GHRP10912 638 aa15.01□□□□□ -0.01
PCDH8-201ENST00000338862 SREBF1P36956 1147 aa15.01□□□□□ -0.01
PCDH8-201ENST00000338862 ZRSR2Q15696 482 aaKnown RBP15.01□□□□□ -0.01
PCDH8-201ENST00000338862 MTERF2Q49AM1 385 aa15.01□□□□□ -0.01
PCDH8-201ENST00000338862 TAF1BQ53T94 588 aaPredicted RBP15.01□□□□□ -0.01
PCDH8-201ENST00000338862 ZBTB33Q86T24 672 aa15.01□□□□□ -0.01
PCDH8-201ENST00000338862 SPDYE1Q8NFV5 336 aaPredicted RBP15.01□□□□□ -0.01
PCDH8-201ENST00000338862 KAT6AQ92794 2004 aa15.01□□□□□ -0.01
PCDH8-201ENST00000338862 TSC22D3Q99576 134 aa15.01□□□□□ -0.01
PCDH8-201ENST00000338862 TRAIPQ9BWF2 469 aa15.01□□□□□ -0.01
PCDH8-201ENST00000338862 IMPG2Q9BZV3 1241 aa15.01□□□□□ -0.01
PCDH8-201ENST00000338862 SLC13A1Q9BZW2 595 aa15.01□□□□□ -0.01
PCDH8-201ENST00000338862 COA1Q9GZY4 146 aa15.01□□□□□ -0.01
PCDH8-201ENST00000338862 SEPT9Q9UHD8 586 aaPredicted RBP15.01□□□□□ -0.01
PCDH8-201ENST00000338862 PTGIRP43119 386 aa15.01□□□□□ -0.01
PCDH8-201ENST00000338862 TMEM154Q6P9G4 183 aa15.01□□□□□ -0.01
PCDH8-201ENST00000338862 USP37Q86T82 979 aa15.01□□□□□ -0.01
PCDH8-201ENST00000338862 CCDC33Q8N5R6 958 aa15.01□□□□□ -0.01
PCDH8-201ENST00000338862 FBXL13Q8NEE6 735 aa15.01□□□□□ -0.01
PCDH8-201ENST00000338862 TMEM121Q9BTD3 319 aa15.01□□□□□ -0.01
PCDH8-201ENST00000338862 MRPL11Q9Y3B7 192 aaKnown RBP15.01□□□□□ -0.01
PCDH8-201ENST00000338862 USH1CQ9Y6N9 552 aa15.01□□□□□ -0.01
PCDH8-201ENST00000338862 SLIT2O94813 1529 aa15.01□□□□□ -0.01
PCDH8-201ENST00000338862 ITIH2P19823 946 aa15.01□□□□□ -0.01
PCDH8-201ENST00000338862 CTCFP49711 727 aaPredicted RBP15.01□□□□□ -0.01
PCDH8-201ENST00000338862 FASTKD3Q14CZ7 662 aaKnown RBP15.01□□□□□ -0.01
PCDH8-201ENST00000338862 RASIP1Q5U651 963 aa15.01□□□□□ -0.01
PCDH8-201ENST00000338862 AP1ARQ63HQ0 302 aa15.01□□□□□ -0.01
PCDH8-201ENST00000338862 CCHCR1Q8TD31 782 aa15.01□□□□□ -0.01
PCDH8-201ENST00000338862 SEMA4DQ92854 862 aa15.01□□□□□ -0.01
PCDH8-201ENST00000338862 CFAP57Q96MR6 1250 aa15.01□□□□□ -0.01
PCDH8-201ENST00000338862 KIAA1683Q9H0B3 1180 aa15.01□□□□□ -0.01
PCDH8-201ENST00000338862 LRRC4BQ9NT99 713 aa15.01□□□□□ -0.01
PCDH8-201ENST00000338862 NXF1Q9UBU9 619 aaKnown RBP15.01□□□□□ -0.01
PCDH8-201ENST00000338862 ATF5Q9Y2D1 282 aaPredicted RBP15.01□□□□□ -0.01
PCDH8-201ENST00000338862 BCL9LQ86UU0 1499 aa15□□□□□ -0.01
PCDH8-201ENST00000338862 CDR2Q01850 454 aa15□□□□□ -0.01
PCDH8-201ENST00000338862 KDSRQ06136 332 aa15□□□□□ -0.01
PCDH8-201ENST00000338862 PRKG1Q13976 671 aa15□□□□□ -0.01
PCDH8-201ENST00000338862 RHPN2Q8IUC4 686 aa15□□□□□ -0.01
PCDH8-201ENST00000338862 C3orf20Q8ND61 904 aa15□□□□□ -0.01
PCDH8-201ENST00000338862 LRRN4Q8WUT4 740 aa15□□□□□ -0.01
PCDH8-201ENST00000338862 NAF1Q96HR8 494 aaKnown RBP15□□□□□ -0.01
PCDH8-201ENST00000338862 NUP188Q5SRE5 1749 aa15□□□□□ -0.01
PCDH8-201ENST00000338862 MYH3P11055 1940 aa15□□□□□ -0.01
PCDH8-201ENST00000338862 EME2A4GXA9 379 aaPredicted RBP15□□□□□ -0.01
PCDH8-201ENST00000338862 UBTFL6P0CB48 400 aaPredicted RBP15□□□□□ -0.01
PCDH8-201ENST00000338862 ESRRAP11474 423 aaPredicted RBP15□□□□□ -0.01
PCDH8-201ENST00000338862 CLK2P49760 499 aaKnown RBP15□□□□□ -0.01
PCDH8-201ENST00000338862 PCNX4Q63HM2 1172 aa15□□□□□ -0.01
PCDH8-201ENST00000338862 LDHDQ86WU2 507 aa15□□□□□ -0.01
PCDH8-201ENST00000338862 ECHDC2Q86YB7 292 aa15□□□□□ -0.01
PCDH8-201ENST00000338862 ADAM7Q9H2U9 754 aa15□□□□□ -0.01
PCDH8-201ENST00000338862 ARMCX1Q9P291 453 aa15□□□□□ -0.01
PCDH8-201ENST00000338862 G3BP2Q9UN86 482 aaKnown RBP15□□□□□ -0.01
PCDH8-201ENST00000338862 EXOC7Q9UPT5 735 aa15□□□□□ -0.01
PCDH8-201ENST00000338862 ZCCHC18P0CG32 403 aa15□□□□□ -0.01
PCDH8-201ENST00000338862 CNGA1P29973 690 aa15□□□□□ -0.01
PCDH8-201ENST00000338862 SSTR1P30872 391 aa15□□□□□ -0.01
PCDH8-201ENST00000338862 RPA3P35244 121 aaPredicted RBP15□□□□□ -0.01
PCDH8-201ENST00000338862 APOBEC3HQ6NTF7 200 aaKnown RBP15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms