RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 CDK17Q00537 523 aa15.92■□□□□ 0.14
CDK5RAP3-201ENST00000338399 ARID5AQ03989 594 aa15.92■□□□□ 0.14
CDK5RAP3-201ENST00000338399 DRAP1Q14919 205 aaPredicted RBP15.92■□□□□ 0.14
CDK5RAP3-201ENST00000338399 ASIC2Q16515 512 aa15.92■□□□□ 0.14
CDK5RAP3-201ENST00000338399 FBXO47Q5MNV8 452 aa15.92■□□□□ 0.14
CDK5RAP3-201ENST00000338399 UBXN11Q5T124 520 aa15.92■□□□□ 0.14
CDK5RAP3-201ENST00000338399 SCARA3Q6AZY7 606 aa15.92■□□□□ 0.14
CDK5RAP3-201ENST00000338399 JADE1Q6IE81 842 aa15.92■□□□□ 0.14
CDK5RAP3-201ENST00000338399 TRAPPC11Q7Z392 1133 aa15.92■□□□□ 0.14
CDK5RAP3-201ENST00000338399 PPM1KQ8N3J5 372 aa15.92■□□□□ 0.14
CDK5RAP3-201ENST00000338399 TATDN2Q93075 761 aa15.92■□□□□ 0.14
CDK5RAP3-201ENST00000338399 NT5C1BQ96P26 610 aa15.92■□□□□ 0.14
CDK5RAP3-201ENST00000338399 DESI2Q9BSY9 194 aa15.92■□□□□ 0.14
CDK5RAP3-201ENST00000338399 NXF3Q9H4D5 531 aaKnown RBP15.92■□□□□ 0.14
CDK5RAP3-201ENST00000338399 AGO3Q9H9G7 860 aaKnown RBP15.92■□□□□ 0.14
CDK5RAP3-201ENST00000338399 NHEJ1Q9H9Q4 299 aaPredicted RBP15.92■□□□□ 0.14
CDK5RAP3-201ENST00000338399 TRMT1Q9NXH9 659 aaKnown RBP15.92■□□□□ 0.14
CDK5RAP3-201ENST00000338399 AIPL1Q9NZN9 384 aa15.92■□□□□ 0.14
CDK5RAP3-201ENST00000338399 ARHGAP20Q9P2F6 1191 aa15.92■□□□□ 0.14
CDK5RAP3-201ENST00000338399 DAAM1Q9Y4D1 1078 aa15.92■□□□□ 0.14
CDK5RAP3-201ENST00000338399 NFICP08651 508 aa15.91■□□□□ 0.14
CDK5RAP3-201ENST00000338399 PNMA6AP0CW24 399 aaPredicted RBP15.91■□□□□ 0.14
CDK5RAP3-201ENST00000338399 GHRP10912 638 aa15.91■□□□□ 0.14
CDK5RAP3-201ENST00000338399 RFX1P22670 979 aa15.91■□□□□ 0.14
CDK5RAP3-201ENST00000338399 CDK7P50613 346 aa15.91■□□□□ 0.14
CDK5RAP3-201ENST00000338399 FAM26DQ5JW98 314 aa15.91■□□□□ 0.14
CDK5RAP3-201ENST00000338399 HGSNATQ68CP4 663 aa15.91■□□□□ 0.14
CDK5RAP3-201ENST00000338399 TWF2Q6IBS0 349 aaKnown RBP15.91■□□□□ 0.14
CDK5RAP3-201ENST00000338399 CCAR2Q8N163 923 aaKnown RBP15.91■□□□□ 0.14
CDK5RAP3-201ENST00000338399 KAT5Q92993 513 aa15.91■□□□□ 0.14
CDK5RAP3-201ENST00000338399 ANKRD36BP1Q96IX9 119 aa15.91■□□□□ 0.14
CDK5RAP3-201ENST00000338399 ZNF333Q96JL9 665 aa15.91■□□□□ 0.14
CDK5RAP3-201ENST00000338399 APOL6Q9BWW8 343 aa15.91■□□□□ 0.14
CDK5RAP3-201ENST00000338399 GPR88Q9GZN0 384 aa15.91■□□□□ 0.14
CDK5RAP3-201ENST00000338399 ASB7Q9H672 318 aa15.91■□□□□ 0.14
CDK5RAP3-201ENST00000338399 RRAGDQ9NQL2 400 aaPredicted RBP15.91■□□□□ 0.14
CDK5RAP3-201ENST00000338399 RALGAPA2Q2PPJ7 1873 aa15.91■□□□□ 0.14
CDK5RAP3-201ENST00000338399 F8VZ95 297 aa15.91■□□□□ 0.14
CDK5RAP3-201ENST00000338399 GPR182O15218 404 aa15.91■□□□□ 0.14
CDK5RAP3-201ENST00000338399 CST3P01034 146 aaPredicted RBP15.91■□□□□ 0.14
CDK5RAP3-201ENST00000338399 TNNC2P02585 160 aa15.91■□□□□ 0.14
CDK5RAP3-201ENST00000338399 TFRCP02786 760 aaKnown RBP15.91■□□□□ 0.14
CDK5RAP3-201ENST00000338399 HSPA1AP0DMV8 641 aaKnown RBP15.91■□□□□ 0.14
CDK5RAP3-201ENST00000338399 HSPA1BP0DMV9 641 aaKnown RBP15.91■□□□□ 0.14
CDK5RAP3-201ENST00000338399 CKBP12277 381 aa15.91■□□□□ 0.14
CDK5RAP3-201ENST00000338399 STAT1P42224 750 aa15.91■□□□□ 0.14
CDK5RAP3-201ENST00000338399 NCOA4Q13772 614 aa15.91■□□□□ 0.14
CDK5RAP3-201ENST00000338399 TDRD12Q587J7 1177 aaKnown RBP15.91■□□□□ 0.14
CDK5RAP3-201ENST00000338399 WDR44Q5JSH3 913 aa15.91■□□□□ 0.14
CDK5RAP3-201ENST00000338399 HELQQ8TDG4 1101 aa15.91■□□□□ 0.14
CDK5RAP3-201ENST00000338399 SEZ6LQ9BYH1 1024 aa15.91■□□□□ 0.14
CDK5RAP3-201ENST00000338399 EPN1Q9Y6I3 576 aaPredicted RBP15.91■□□□□ 0.14
CDK5RAP3-201ENST00000338399 ZC3H11AO75152 810 aaKnown RBP eCLIP15.9■□□□□ 0.146e-7■■■□□ 17.4
CDK5RAP3-201ENST00000338399 CAND2O75155 1236 aa15.9■□□□□ 0.14
CDK5RAP3-201ENST00000338399 GFPT2O94808 682 aa15.9■□□□□ 0.14
CDK5RAP3-201ENST00000338399 SGPL1O95470 568 aa15.9■□□□□ 0.14
CDK5RAP3-201ENST00000338399 SERPING1P05155 500 aa15.9■□□□□ 0.14
CDK5RAP3-201ENST00000338399 CD52P31358 61 aa15.9■□□□□ 0.14
CDK5RAP3-201ENST00000338399 SOX5P35711 763 aa15.9■□□□□ 0.14
CDK5RAP3-201ENST00000338399 EIF4A3P38919 411 aaKnown RBP15.9■□□□□ 0.14
CDK5RAP3-201ENST00000338399 YARSP54577 528 aaKnown RBP15.9■□□□□ 0.14
CDK5RAP3-201ENST00000338399 LPIN1Q14693 890 aa15.9■□□□□ 0.14
CDK5RAP3-201ENST00000338399 SPOPLQ6IQ16 392 aa15.9■□□□□ 0.14
CDK5RAP3-201ENST00000338399 IRF2BP2Q7Z5L9 587 aa15.9■□□□□ 0.14
CDK5RAP3-201ENST00000338399 U2AF1L4Q8WU68 220 aaKnown RBP15.9■□□□□ 0.14
CDK5RAP3-201ENST00000338399 KREMEN1Q96MU8 473 aa15.9■□□□□ 0.14
CDK5RAP3-201ENST00000338399 CRISPLD2Q9H0B8 497 aa15.9■□□□□ 0.14
CDK5RAP3-201ENST00000338399 CXCL16Q9H2A7 254 aa15.9■□□□□ 0.14
CDK5RAP3-201ENST00000338399 C1orf112Q9NSG2 853 aa15.9■□□□□ 0.14
CDK5RAP3-201ENST00000338399 PADI3Q9ULW8 664 aa15.9■□□□□ 0.14
CDK5RAP3-201ENST00000338399 PPP2R2CQ9Y2T4 447 aa15.9■□□□□ 0.14
CDK5RAP3-201ENST00000338399 FOXN3O00409 490 aaPredicted RBP15.89■□□□□ 0.13
CDK5RAP3-201ENST00000338399 NDUFA10O95299 355 aa15.89■□□□□ 0.13
CDK5RAP3-201ENST00000338399 AKAP5P24588 427 aa15.89■□□□□ 0.13
CDK5RAP3-201ENST00000338399 CTCFP49711 727 aaPredicted RBP15.89■□□□□ 0.13
CDK5RAP3-201ENST00000338399 MFAP3P55082 362 aa15.89■□□□□ 0.13
CDK5RAP3-201ENST00000338399 KLHL30Q0D2K2 578 aa15.89■□□□□ 0.13
CDK5RAP3-201ENST00000338399 PAK2Q13177 524 aa15.89■□□□□ 0.13
CDK5RAP3-201ENST00000338399 FAM126BQ8IXS8 530 aa15.89■□□□□ 0.13
CDK5RAP3-201ENST00000338399 CCDC170Q8IYT3 715 aa15.89■□□□□ 0.13
CDK5RAP3-201ENST00000338399 TMEM130Q8N3G9 435 aa15.89■□□□□ 0.13
CDK5RAP3-201ENST00000338399 SMG8Q8ND04 991 aaKnown RBP15.89■□□□□ 0.13
CDK5RAP3-201ENST00000338399 ACRBPQ8NEB7 543 aa15.89■□□□□ 0.13
CDK5RAP3-201ENST00000338399 CCDC42Q96M95 316 aa15.89■□□□□ 0.13
CDK5RAP3-201ENST00000338399 ERVK-5Q9HDB9 667 aa15.89■□□□□ 0.13
CDK5RAP3-201ENST00000338399 CHST12Q9NRB3 414 aa15.89■□□□□ 0.13
CDK5RAP3-201ENST00000338399 KCND1Q9NSA2 647 aa15.89■□□□□ 0.13
CDK5RAP3-201ENST00000338399 IPPQ9Y573 584 aa15.89■□□□□ 0.13
CDK5RAP3-201ENST00000338399 ADGRG1Q9Y653 693 aa15.89■□□□□ 0.13
CDK5RAP3-201ENST00000338399 RECQL4O94761 1208 aa15.88■□□□□ 0.13
CDK5RAP3-201ENST00000338399 CLSTN1O94985 981 aa15.88■□□□□ 0.13
CDK5RAP3-201ENST00000338399 CYLC1P35663 651 aaPredicted RBP15.88■□□□□ 0.13
CDK5RAP3-201ENST00000338399 MNX1P50219 401 aaPredicted RBP15.88■□□□□ 0.13
CDK5RAP3-201ENST00000338399 TRPC3Q13507 836 aa15.88■□□□□ 0.13
CDK5RAP3-201ENST00000338399 TMEM132DQ14C87 1099 aa15.88■□□□□ 0.13
CDK5RAP3-201ENST00000338399 PKN2Q16513 984 aaKnown RBP15.88■□□□□ 0.13
CDK5RAP3-201ENST00000338399 TRAF7Q6Q0C0 670 aa15.88■□□□□ 0.13
CDK5RAP3-201ENST00000338399 CD302Q8IX05 232 aa15.88■□□□□ 0.13
CDK5RAP3-201ENST00000338399 SNX27Q96L92 541 aa15.88■□□□□ 0.13
CDK5RAP3-201ENST00000338399 RNF39Q9H2S5 420 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms