RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 ZFATQ9P243 1243 aa14.53□□□□□ -0.08
RTN4-202ENST00000337526 APRTP07741 180 aa14.52□□□□□ -0.08
RTN4-202ENST00000337526 ERFP50548 548 aa14.52□□□□□ -0.08
RTN4-202ENST00000337526 PTGISQ16647 500 aa14.52□□□□□ -0.08
RTN4-202ENST00000337526 TWF2Q6IBS0 349 aaKnown RBP14.52□□□□□ -0.08
RTN4-202ENST00000337526 ROPN1BQ9BZX4 212 aaPredicted RBP14.52□□□□□ -0.08
RTN4-202ENST00000337526 ROPN1Q9HAT0 212 aaPredicted RBP14.52□□□□□ -0.08
RTN4-202ENST00000337526 KBTBD4Q9NVX7 518 aa14.52□□□□□ -0.08
RTN4-202ENST00000337526 A8MXQ7 604 aa14.52□□□□□ -0.08
RTN4-202ENST00000337526 HSD17B3P37058 310 aa14.52□□□□□ -0.08
RTN4-202ENST00000337526 TMED1Q13445 227 aa14.52□□□□□ -0.08
RTN4-202ENST00000337526 NTRK3Q16288 839 aa14.52□□□□□ -0.08
RTN4-202ENST00000337526 XKR3Q5GH77 459 aa14.52□□□□□ -0.08
RTN4-202ENST00000337526 FIGNQ5HY92 759 aa14.52□□□□□ -0.08
RTN4-202ENST00000337526 CATSPER3Q86XQ3 398 aa14.52□□□□□ -0.08
RTN4-202ENST00000337526 ADA2Q9NZK5 511 aa14.52□□□□□ -0.08
RTN4-202ENST00000337526 RNF103-CHMP3A0A140T963 221 aa14.52□□□□□ -0.09
RTN4-202ENST00000337526 KDSRQ06136 332 aa14.52□□□□□ -0.09
RTN4-202ENST00000337526 CEP70Q8NHQ1 597 aa14.52□□□□□ -0.09
RTN4-202ENST00000337526 ERP27Q96DN0 273 aa14.52□□□□□ -0.09
RTN4-202ENST00000337526 LRRIQ3A6PVS8 624 aaPredicted RBP14.52□□□□□ -0.09
RTN4-202ENST00000337526 SLC10A4Q96EP9 437 aa14.52□□□□□ -0.09
RTN4-202ENST00000337526 MAD2L2Q9UI95 211 aa14.52□□□□□ -0.09
RTN4-202ENST00000337526 PRLRP16471 622 aa14.51□□□□□ -0.09
RTN4-202ENST00000337526 STAT5BP51692 787 aa14.51□□□□□ -0.09
RTN4-202ENST00000337526 HABP4Q5JVS0 413 aaKnown RBP14.51□□□□□ -0.09
RTN4-202ENST00000337526 CDKAL1Q5VV42 579 aa14.51□□□□□ -0.09
RTN4-202ENST00000337526 PAPD7Q5XG87 772 aaKnown RBP14.51□□□□□ -0.09
RTN4-202ENST00000337526 CDC42EP5Q6NZY7 148 aa14.51□□□□□ -0.09
RTN4-202ENST00000337526 GJB7Q6PEY0 223 aa14.51□□□□□ -0.09
RTN4-202ENST00000337526 BARGINQ6ZT62 677 aa14.51□□□□□ -0.09
RTN4-202ENST00000337526 GIPC2Q8TF65 315 aa14.51□□□□□ -0.09
RTN4-202ENST00000337526 TRPV6Q9H1D0 765 aa14.51□□□□□ -0.09
RTN4-202ENST00000337526 YY1AP1Q9H869 796 aa14.51□□□□□ -0.09
RTN4-202ENST00000337526 RAB6BQ9NRW1 208 aa14.51□□□□□ -0.09
RTN4-202ENST00000337526 EIF3DO15371 548 aaKnown RBP eCLIP14.51□□□□□ -0.09
RTN4-202ENST00000337526 ATMINO43313 823 aaPredicted RBP14.51□□□□□ -0.09
RTN4-202ENST00000337526 ZFXP17010 805 aaPredicted RBP14.51□□□□□ -0.09
RTN4-202ENST00000337526 SESN2P58004 480 aaPredicted RBP14.51□□□□□ -0.09
RTN4-202ENST00000337526 NCOA4Q13772 614 aa14.51□□□□□ -0.09
RTN4-202ENST00000337526 EFHC2Q5JST6 749 aa14.51□□□□□ -0.09
RTN4-202ENST00000337526 SYCP2LQ5T4T6 812 aa14.51□□□□□ -0.09
RTN4-202ENST00000337526 RBBP8NLQ8NC74 664 aaPredicted RBP14.51□□□□□ -0.09
RTN4-202ENST00000337526 DAGLBQ8NCG7 672 aa14.51□□□□□ -0.09
RTN4-202ENST00000337526 TPCN2Q8NHX9 752 aa14.51□□□□□ -0.09
RTN4-202ENST00000337526 DACT3Q96B18 629 aaPredicted RBP14.51□□□□□ -0.09
RTN4-202ENST00000337526 ALKBH8Q96BT7 664 aaKnown RBP14.51□□□□□ -0.09
RTN4-202ENST00000337526 FOXP3Q9BZS1 431 aa14.51□□□□□ -0.09
RTN4-202ENST00000337526 NPHS2Q9NP85 383 aa14.51□□□□□ -0.09
RTN4-202ENST00000337526 PIM2Q9P1W9 311 aa14.51□□□□□ -0.09
RTN4-202ENST00000337526 CHORDC1Q9UHD1 332 aaPredicted RBP14.51□□□□□ -0.09
RTN4-202ENST00000337526 PNMA3Q9UL41 463 aa14.51□□□□□ -0.09
RTN4-202ENST00000337526 CCT8L1PA6NM43 557 aa14.51□□□□□ -0.09
RTN4-202ENST00000337526 ZBBXA8MT70 800 aa14.51□□□□□ -0.09
RTN4-202ENST00000337526 HNRNPCL1O60812 293 aaKnown RBP14.51□□□□□ -0.09
RTN4-202ENST00000337526 PDGFRAP16234 1089 aa14.51□□□□□ -0.09
RTN4-202ENST00000337526 COPB2P35606 906 aa14.51□□□□□ -0.09
RTN4-202ENST00000337526 PDCD2Q16342 344 aaPredicted RBP14.51□□□□□ -0.09
RTN4-202ENST00000337526 DTX3LQ8TDB6 740 aa14.51□□□□□ -0.09
RTN4-202ENST00000337526 TMEM143Q96AN5 459 aa14.51□□□□□ -0.09
RTN4-202ENST00000337526 FAM118BQ9BPY3 351 aa14.51□□□□□ -0.09
RTN4-202ENST00000337526 TSSK1BQ9BXA7 367 aa14.51□□□□□ -0.09
RTN4-202ENST00000337526 TRIM15Q9C019 465 aa14.51□□□□□ -0.09
RTN4-202ENST00000337526 PPME1Q9Y570 386 aa14.51□□□□□ -0.09
RTN4-202ENST00000337526 SLC37A4O43826 429 aa14.5□□□□□ -0.09
RTN4-202ENST00000337526 CYP11B2P19099 503 aa14.5□□□□□ -0.09
RTN4-202ENST00000337526 GRB10Q13322 594 aa14.5□□□□□ -0.09
RTN4-202ENST00000337526 BAATQ14032 418 aaPredicted RBP14.5□□□□□ -0.09
RTN4-202ENST00000337526 TTLL4Q14679 1199 aa14.5□□□□□ -0.09
RTN4-202ENST00000337526 PRR5LQ6MZQ0 368 aa14.5□□□□□ -0.09
RTN4-202ENST00000337526 TTC8Q8TAM2 541 aa14.5□□□□□ -0.09
RTN4-202ENST00000337526 MDM1Q8TC05 714 aa14.5□□□□□ -0.09
RTN4-202ENST00000337526 AGR3Q8TD06 166 aa14.5□□□□□ -0.09
RTN4-202ENST00000337526 CRAMP1Q96RY5 1269 aa14.5□□□□□ -0.09
RTN4-202ENST00000337526 MRPL40Q9NQ50 206 aaKnown RBP14.5□□□□□ -0.09
RTN4-202ENST00000337526 WDR35Q9P2L0 1181 aa14.5□□□□□ -0.09
RTN4-202ENST00000337526 ATF5Q9Y2D1 282 aaPredicted RBP14.5□□□□□ -0.09
RTN4-202ENST00000337526 L3MBTL1Q9Y468 752 aa14.5□□□□□ -0.09
RTN4-202ENST00000337526 NEXMIFQ5QGS0 1516 aa14.5□□□□□ -0.09
RTN4-202ENST00000337526 GPR75-ASB3A0A0A6YYF3 556 aa14.5□□□□□ -0.09
RTN4-202ENST00000337526 KCNN4O15554 427 aa14.5□□□□□ -0.09
RTN4-202ENST00000337526 PYGBP11216 843 aa14.5□□□□□ -0.09
RTN4-202ENST00000337526 ADORA2BP29275 332 aa14.5□□□□□ -0.09
RTN4-202ENST00000337526 EEF1DP29692 281 aaKnown RBP14.5□□□□□ -0.09
RTN4-202ENST00000337526 MAGEA4P43358 317 aa14.5□□□□□ -0.09
RTN4-202ENST00000337526 STRIP1Q5VSL9 837 aa14.5□□□□□ -0.09
RTN4-202ENST00000337526 AGGF1Q8N302 714 aaeCLIP14.5□□□□□ -0.09
RTN4-202ENST00000337526 CDC26Q8NHZ8 85 aa14.5□□□□□ -0.09
RTN4-202ENST00000337526 LBHD1Q9BQE6 289 aaPredicted RBP14.5□□□□□ -0.09
RTN4-202ENST00000337526 RPAP3Q9H6T3 665 aaPredicted RBP14.5□□□□□ -0.09
RTN4-202ENST00000337526 PSMC3IPQ9P2W1 217 aaPredicted RBP14.5□□□□□ -0.09
RTN4-202ENST00000337526 KIDINS220Q9ULH0 1771 aa14.5□□□□□ -0.09
RTN4-202ENST00000337526 ST3GAL1Q11201 340 aa14.5□□□□□ -0.09
RTN4-202ENST00000337526 RANBP17Q9H2T7 1088 aaKnown RBP14.5□□□□□ -0.09
RTN4-202ENST00000337526 APOL1O14791 398 aa14.5□□□□□ -0.09
RTN4-202ENST00000337526 NME3Q13232 169 aa14.5□□□□□ -0.09
RTN4-202ENST00000337526 HIC1Q14526 733 aa14.5□□□□□ -0.09
RTN4-202ENST00000337526 HHIPL2Q6UWX4 724 aa14.5□□□□□ -0.09
RTN4-202ENST00000337526 SCN4BQ8IWT1 228 aa14.5□□□□□ -0.09
RTN4-202ENST00000337526 CASKIN2Q8WXE0 1202 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms