RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 NAB2Q15742 525 aa16.68■□□□□ 0.26
SEC13-201ENST00000337354 STX1AQ16623 288 aa16.68■□□□□ 0.26
SEC13-201ENST00000337354 PPP2R2DQ66LE6 453 aa16.68■□□□□ 0.26
SEC13-201ENST00000337354 FILIP1Q7Z7B0 1213 aa16.68■□□□□ 0.26
SEC13-201ENST00000337354 ZNF280BQ86YH2 543 aa16.68■□□□□ 0.26
SEC13-201ENST00000337354 COLGALT2Q8IYK4 626 aa16.68■□□□□ 0.26
SEC13-201ENST00000337354 ZSWIM2Q8NEG5 633 aa16.68■□□□□ 0.26
SEC13-201ENST00000337354 CACTINQ8WUQ7 758 aaKnown RBP16.68■□□□□ 0.26
SEC13-201ENST00000337354 DDX27Q96GQ7 796 aaKnown RBP16.68■□□□□ 0.26
SEC13-201ENST00000337354 CEP63Q96MT8 703 aa16.68■□□□□ 0.26
SEC13-201ENST00000337354 UROC1Q96N76 676 aa16.68■□□□□ 0.26
SEC13-201ENST00000337354 ZMAT2Q96NC0 199 aaKnown RBP16.68■□□□□ 0.26
SEC13-201ENST00000337354 TTYH1Q9H313 450 aaPredicted RBP16.68■□□□□ 0.26
SEC13-201ENST00000337354 CTNND2Q9UQB3 1225 aa16.68■□□□□ 0.26
SEC13-201ENST00000337354 MYH11P35749 1972 aa16.68■□□□□ 0.26
SEC13-201ENST00000337354 TRIM49BA6NDI0 452 aa16.67■□□□□ 0.26
SEC13-201ENST00000337354 C5orf67F2Z3F1 127 aa16.67■□□□□ 0.26
SEC13-201ENST00000337354 AKAP3O75969 853 aa16.67■□□□□ 0.26
SEC13-201ENST00000337354 GALTP07902 379 aa16.67■□□□□ 0.26
SEC13-201ENST00000337354 LINC00271P0C7V0 271 aa16.67■□□□□ 0.26
SEC13-201ENST00000337354 CCDC192P0DO97 292 aa16.67■□□□□ 0.26
SEC13-201ENST00000337354 RPL9P32969 192 aaKnown RBP16.67■□□□□ 0.26
SEC13-201ENST00000337354 BCAR1P56945 870 aa16.67■□□□□ 0.26
SEC13-201ENST00000337354 MCCD1P59942 119 aaPredicted RBP16.67■□□□□ 0.26
SEC13-201ENST00000337354 CYP24A1Q07973 514 aa16.67■□□□□ 0.26
SEC13-201ENST00000337354 GLRA4Q5JXX5 417 aa16.67■□□□□ 0.26
SEC13-201ENST00000337354 KCNT2Q6UVM3 1135 aa16.67■□□□□ 0.26
SEC13-201ENST00000337354 INTS8Q75QN2 995 aaKnown RBP16.67■□□□□ 0.26
SEC13-201ENST00000337354 CSGALNACT2Q8N6G5 542 aa16.67■□□□□ 0.26
SEC13-201ENST00000337354 KIF12Q96FN5 646 aa16.67■□□□□ 0.26
SEC13-201ENST00000337354 ZNF558Q96NG5 402 aa16.67■□□□□ 0.26
SEC13-201ENST00000337354 FNBP1Q96RU3 617 aa16.67■□□□□ 0.26
SEC13-201ENST00000337354 DUSP9Q99956 384 aaKnown RBP16.67■□□□□ 0.26
SEC13-201ENST00000337354 NAT10Q9H0A0 1025 aaKnown RBP16.67■□□□□ 0.26
SEC13-201ENST00000337354 CXCL16Q9H2A7 254 aa16.67■□□□□ 0.26
SEC13-201ENST00000337354 ZNF576Q9H609 170 aa16.67■□□□□ 0.26
SEC13-201ENST00000337354 MTMR10Q9NXD2 777 aa16.67■□□□□ 0.26
SEC13-201ENST00000337354 PLAGL2Q9UPG8 496 aa16.67■□□□□ 0.26
SEC13-201ENST00000337354 FAN1Q9Y2M0 1017 aa16.67■□□□□ 0.26
SEC13-201ENST00000337354 COL4A6Q14031 1691 aa16.67■□□□□ 0.26
SEC13-201ENST00000337354 NLRC5Q86WI3 1866 aa16.67■□□□□ 0.26
SEC13-201ENST00000337354 SLC16A3O15427 465 aaKnown RBP16.66■□□□□ 0.26
SEC13-201ENST00000337354 ZC3H11AO75152 810 aaKnown RBP eCLIP16.66■□□□□ 0.26
SEC13-201ENST00000337354 GNA14O95837 355 aa16.66■□□□□ 0.26
SEC13-201ENST00000337354 PPM1AP35813 382 aa16.66■□□□□ 0.26
SEC13-201ENST00000337354 CASP4P49662 377 aa16.66■□□□□ 0.26
SEC13-201ENST00000337354 AP3M2P53677 418 aa16.66■□□□□ 0.26
SEC13-201ENST00000337354 STX17P56962 302 aa16.66■□□□□ 0.26
SEC13-201ENST00000337354 TYRO3Q06418 890 aa16.66■□□□□ 0.26
SEC13-201ENST00000337354 TMEM132DQ14C87 1099 aa16.66■□□□□ 0.26
SEC13-201ENST00000337354 SPATA1Q5VX52 437 aa16.66■□□□□ 0.26
SEC13-201ENST00000337354 JADE1Q6IE81 842 aa16.66■□□□□ 0.26
SEC13-201ENST00000337354 WDR49Q8IV35 697 aa16.66■□□□□ 0.26
SEC13-201ENST00000337354 FAM186BQ8IYM0 893 aa16.66■□□□□ 0.26
SEC13-201ENST00000337354 BEST2Q8NFU1 509 aa16.66■□□□□ 0.26
SEC13-201ENST00000337354 TMC2Q8TDI7 906 aa16.66■□□□□ 0.26
SEC13-201ENST00000337354 COLEC11Q9BWP8 271 aa16.66■□□□□ 0.26
SEC13-201ENST00000337354 METTL14Q9HCE5 456 aaKnown RBP16.66■□□□□ 0.26
SEC13-201ENST00000337354 PDE11AQ9HCR9 933 aa16.66■□□□□ 0.26
SEC13-201ENST00000337354 STK39Q9UEW8 545 aa16.66■□□□□ 0.26
SEC13-201ENST00000337354 SZT2Q5T011 3432 aa16.66■□□□□ 0.26
SEC13-201ENST00000337354 NRP1O14786 923 aa16.65■□□□□ 0.26
SEC13-201ENST00000337354 IKBKBO14920 756 aa16.65■□□□□ 0.26
SEC13-201ENST00000337354 EPB41P11171 864 aaKnown RBP16.65■□□□□ 0.26
SEC13-201ENST00000337354 KRT13P13646 458 aa16.65■□□□□ 0.26
SEC13-201ENST00000337354 OR1G1P47890 313 aa16.65■□□□□ 0.26
SEC13-201ENST00000337354 CLDN10P78369 228 aa16.65■□□□□ 0.26
SEC13-201ENST00000337354 DUOXA2Q1HG44 320 aa16.65■□□□□ 0.26
SEC13-201ENST00000337354 EPC2Q52LR7 807 aa16.65■□□□□ 0.26
SEC13-201ENST00000337354 DCLRE1AQ6PJP8 1040 aa16.65■□□□□ 0.26
SEC13-201ENST00000337354 COLGALT1Q8NBJ5 622 aa16.65■□□□□ 0.26
SEC13-201ENST00000337354 ENOX1Q8TC92 643 aaKnown RBP16.65■□□□□ 0.26
SEC13-201ENST00000337354 PARD3BQ8TEW8 1205 aa16.65■□□□□ 0.26
SEC13-201ENST00000337354 SRRTQ9BXP5 876 aaKnown RBP16.65■□□□□ 0.26
SEC13-201ENST00000337354 SPG21Q9NZD8 308 aa16.65■□□□□ 0.26
SEC13-201ENST00000337354 DNAJB4Q9UDY4 337 aa16.65■□□□□ 0.26
SEC13-201ENST00000337354 MYO9BQ13459 2157 aa16.65■□□□□ 0.26
SEC13-201ENST00000337354 SYCE3A1L190 88 aa16.64■□□□□ 0.26
SEC13-201ENST00000337354 ARHGEF15O94989 841 aa16.64■□□□□ 0.26
SEC13-201ENST00000337354 TNNI1P19237 187 aa16.64■□□□□ 0.26
SEC13-201ENST00000337354 PAX3P23760 479 aa16.64■□□□□ 0.26
SEC13-201ENST00000337354 LRPAP1P30533 357 aa16.64■□□□□ 0.26
SEC13-201ENST00000337354 PLCB3Q01970 1234 aa16.64■□□□□ 0.26
SEC13-201ENST00000337354 KRT17Q04695 432 aa16.64■□□□□ 0.26
SEC13-201ENST00000337354 SPAG1Q07617 926 aa16.64■□□□□ 0.26
SEC13-201ENST00000337354 TPD52L1Q16890 204 aaPredicted RBP16.64■□□□□ 0.26
SEC13-201ENST00000337354 ZSCAN23Q3MJ62 389 aa16.64■□□□□ 0.26
SEC13-201ENST00000337354 FRMD5Q7Z6J6 570 aa16.64■□□□□ 0.26
SEC13-201ENST00000337354 MYLIPQ8WY64 445 aa16.64■□□□□ 0.26
SEC13-201ENST00000337354 CCDC127Q96BQ5 260 aa16.64■□□□□ 0.26
SEC13-201ENST00000337354 BORCS6Q96GS4 357 aa16.64■□□□□ 0.26
SEC13-201ENST00000337354 ANKRD36BP1Q96IX9 119 aa16.64■□□□□ 0.26
SEC13-201ENST00000337354 GUCD1Q96NT3 240 aa16.64■□□□□ 0.26
SEC13-201ENST00000337354 MED15Q96RN5 788 aa16.64■□□□□ 0.26
SEC13-201ENST00000337354 C17orf80Q9BSJ5 609 aa16.64■□□□□ 0.26
SEC13-201ENST00000337354 C11orf84Q9BUA3 381 aaPredicted RBP16.64■□□□□ 0.26
SEC13-201ENST00000337354 INTS13Q9NVM9 706 aa16.64■□□□□ 0.26
SEC13-201ENST00000337354 TULP1O00294 542 aaPredicted RBP16.64■□□□□ 0.25
SEC13-201ENST00000337354 CAVIN2O95810 425 aa16.64■□□□□ 0.25
SEC13-201ENST00000337354 NFICP08651 508 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms