RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 MCF2LO15068 1137 aa14□□□□□ -0.17
COL2A1-201ENST00000337299 STK10O94804 968 aaKnown RBP14□□□□□ -0.17
COL2A1-201ENST00000337299 GAP43P17677 238 aa14□□□□□ -0.17
COL2A1-201ENST00000337299 HIF1AQ16665 826 aa14□□□□□ -0.17
COL2A1-201ENST00000337299 MIIPQ5JXC2 388 aa14□□□□□ -0.17
COL2A1-201ENST00000337299 SH2D3AQ9BRG2 576 aa14□□□□□ -0.17
COL2A1-201ENST00000337299 OSBPL8Q9BZF1 889 aa14□□□□□ -0.17
COL2A1-201ENST00000337299 NMRK1Q9NWW6 199 aa14□□□□□ -0.17
COL2A1-201ENST00000337299 SENP1Q9P0U3 644 aa14□□□□□ -0.17
COL2A1-201ENST00000337299 PCDHGC5Q9Y5F6 944 aa14□□□□□ -0.17
COL2A1-201ENST00000337299 TTC36A6NLP5 189 aa14□□□□□ -0.17
COL2A1-201ENST00000337299 HNRNPDLO14979 420 aaKnown RBP14□□□□□ -0.17
COL2A1-201ENST00000337299 RPS6KA4O75676 772 aa14□□□□□ -0.17
COL2A1-201ENST00000337299 SP100P23497 879 aaPredicted RBP14□□□□□ -0.17
COL2A1-201ENST00000337299 PON1P27169 355 aa14□□□□□ -0.17
COL2A1-201ENST00000337299 EXOC3L1Q86VI1 746 aa14□□□□□ -0.17
COL2A1-201ENST00000337299 ATP11CQ8NB49 1132 aa14□□□□□ -0.17
COL2A1-201ENST00000337299 SPATA20Q8TB22 786 aa14□□□□□ -0.17
COL2A1-201ENST00000337299 CCDC138Q96M89 665 aa14□□□□□ -0.17
COL2A1-201ENST00000337299 ADA2Q9NZK5 511 aa14□□□□□ -0.17
COL2A1-201ENST00000337299 INPP5FQ9Y2H2 1132 aa14□□□□□ -0.17
COL2A1-201ENST00000337299 TMEM131LA2VDJ0 1609 aa13.99□□□□□ -0.17
COL2A1-201ENST00000337299 ATP6V1G1O75348 118 aa13.99□□□□□ -0.17
COL2A1-201ENST00000337299 PIAS1O75925 651 aa13.99□□□□□ -0.17
COL2A1-201ENST00000337299 GGPS1O95749 300 aa13.99□□□□□ -0.17
COL2A1-201ENST00000337299 RIPK1Q13546 671 aa13.99□□□□□ -0.17
COL2A1-201ENST00000337299 SPRED3Q2MJR0 410 aa13.99□□□□□ -0.17
COL2A1-201ENST00000337299 Q4G0T1 1027 aa13.99□□□□□ -0.17
COL2A1-201ENST00000337299 DNAJC24Q6P3W2 148 aa13.99□□□□□ -0.17
COL2A1-201ENST00000337299 FAM13CQ8NE31 585 aa13.99□□□□□ -0.17
COL2A1-201ENST00000337299 RMDN2Q96LZ7 410 aa13.99□□□□□ -0.17
COL2A1-201ENST00000337299 ANKRD27Q96NW4 1050 aa13.99□□□□□ -0.17
COL2A1-201ENST00000337299 STK33Q9BYT3 514 aa13.99□□□□□ -0.17
COL2A1-201ENST00000337299 MMADHCQ9H3L0 296 aaPredicted RBP13.99□□□□□ -0.17
COL2A1-201ENST00000337299 ARHGEF10LQ9HCE6 1279 aa13.99□□□□□ -0.17
COL2A1-201ENST00000337299 GMNNO75496 209 aa13.99□□□□□ -0.17
COL2A1-201ENST00000337299 ADARP55265 1226 aaKnown RBP13.99□□□□□ -0.17
COL2A1-201ENST00000337299 GRB10Q13322 594 aa13.99□□□□□ -0.17
COL2A1-201ENST00000337299 RPS6KA2Q15349 733 aa13.99□□□□□ -0.17
COL2A1-201ENST00000337299 ZC2HC1CQ53FD0 456 aaPredicted RBP13.99□□□□□ -0.17
COL2A1-201ENST00000337299 SCUBE1Q8IWY4 988 aa13.99□□□□□ -0.17
COL2A1-201ENST00000337299 NLGN1Q8N2Q7 840 aa13.99□□□□□ -0.17
COL2A1-201ENST00000337299 PWWP2AQ96N64 755 aa13.99□□□□□ -0.17
COL2A1-201ENST00000337299 MTRQ99707 1265 aa13.99□□□□□ -0.17
COL2A1-201ENST00000337299 MXD3Q9BW11 206 aa13.99□□□□□ -0.17
COL2A1-201ENST00000337299 TMEM117Q9H0C3 514 aa13.99□□□□□ -0.17
COL2A1-201ENST00000337299 TJP3O95049 919 aa13.99□□□□□ -0.17
COL2A1-201ENST00000337299 TTC4O95801 387 aa13.99□□□□□ -0.17
COL2A1-201ENST00000337299 RARAP10276 462 aa13.99□□□□□ -0.17
COL2A1-201ENST00000337299 ALDH1B1P30837 517 aa13.99□□□□□ -0.17
COL2A1-201ENST00000337299 ATICP31939 592 aa13.99□□□□□ -0.17
COL2A1-201ENST00000337299 GRM4Q14833 912 aa13.99□□□□□ -0.17
COL2A1-201ENST00000337299 KLHL38Q2WGJ6 581 aa13.99□□□□□ -0.17
COL2A1-201ENST00000337299 FBXO11Q86XK2 927 aa13.99□□□□□ -0.17
COL2A1-201ENST00000337299 RIBC1Q8N443 379 aaPredicted RBP13.99□□□□□ -0.17
COL2A1-201ENST00000337299 FBXL16Q8N461 479 aa13.99□□□□□ -0.17
COL2A1-201ENST00000337299 ANO3Q9BYT9 981 aa13.99□□□□□ -0.17
COL2A1-201ENST00000337299 MRPL47Q9HD33 250 aaKnown RBP13.99□□□□□ -0.17
COL2A1-201ENST00000337299 SEPT10Q9P0V9 454 aa13.99□□□□□ -0.17
COL2A1-201ENST00000337299 PSMC3IPQ9P2W1 217 aaPredicted RBP13.99□□□□□ -0.17
COL2A1-201ENST00000337299 FLT1P17948 1338 aa13.99□□□□□ -0.17
COL2A1-201ENST00000337299 HSPA4LO95757 839 aa13.98□□□□□ -0.17
COL2A1-201ENST00000337299 DNAL1Q4LDG9 190 aa13.98□□□□□ -0.17
COL2A1-201ENST00000337299 RINT1Q6NUQ1 792 aa13.98□□□□□ -0.17
COL2A1-201ENST00000337299 C3orf62Q6ZUJ4 267 aa13.98□□□□□ -0.17
COL2A1-201ENST00000337299 MIGA2Q7L4E1 593 aa13.98□□□□□ -0.17
COL2A1-201ENST00000337299 NT5DC3Q86UY8 548 aa13.98□□□□□ -0.17
COL2A1-201ENST00000337299 ATP8B4Q8TF62 1192 aa13.98□□□□□ -0.17
COL2A1-201ENST00000337299 UCMAQ8WVF2 138 aa13.98□□□□□ -0.17
COL2A1-201ENST00000337299 CENPTQ96BT3 561 aa13.98□□□□□ -0.17
COL2A1-201ENST00000337299 ZSWIM1Q9BR11 485 aa13.98□□□□□ -0.17
COL2A1-201ENST00000337299 ASCC2Q9H1I8 757 aaPredicted RBP13.98□□□□□ -0.17
COL2A1-201ENST00000337299 TBC1D23Q9NUY8 699 aa13.98□□□□□ -0.17
COL2A1-201ENST00000337299 SLC12A6Q9UHW9 1150 aa13.98□□□□□ -0.17
COL2A1-201ENST00000337299 ARHGAP26Q9UNA1 814 aa13.98□□□□□ -0.17
COL2A1-201ENST00000337299 DIP2AQ14689 1571 aa13.98□□□□□ -0.17
COL2A1-201ENST00000337299 AFF2P51816 1311 aa13.98□□□□□ -0.17
COL2A1-201ENST00000337299 RTN3O95197 1032 aaPredicted RBP13.98□□□□□ -0.17
COL2A1-201ENST00000337299 FMO5P49326 533 aa13.98□□□□□ -0.17
COL2A1-201ENST00000337299 CDK8P49336 464 aa13.98□□□□□ -0.17
COL2A1-201ENST00000337299 BRDTQ58F21 947 aaPredicted RBP13.98□□□□□ -0.17
COL2A1-201ENST00000337299 MTO1Q9Y2Z2 717 aaKnown RBP13.98□□□□□ -0.17
COL2A1-201ENST00000337299 RNF103-CHMP3A0A140T963 221 aa13.98□□□□□ -0.17
COL2A1-201ENST00000337299 E2F8A0AVK6 867 aa13.98□□□□□ -0.17
COL2A1-201ENST00000337299 AIM2O14862 343 aa13.98□□□□□ -0.17
COL2A1-201ENST00000337299 ZFXP17010 805 aaPredicted RBP13.98□□□□□ -0.17
COL2A1-201ENST00000337299 TSPY1Q01534 308 aa13.98□□□□□ -0.17
COL2A1-201ENST00000337299 TRIM28Q13263 835 aaKnown RBP13.98□□□□□ -0.17
COL2A1-201ENST00000337299 ACAP1Q15027 740 aa13.98□□□□□ -0.17
COL2A1-201ENST00000337299 RAPH1Q70E73 1250 aa13.98□□□□□ -0.17
COL2A1-201ENST00000337299 RSPH3Q86UC2 560 aa13.98□□□□□ -0.17
COL2A1-201ENST00000337299 MAB21L3Q8N8X9 362 aa13.98□□□□□ -0.17
COL2A1-201ENST00000337299 SH3RF3Q8TEJ3 882 aaPredicted RBP13.98□□□□□ -0.17
COL2A1-201ENST00000337299 FAF2Q96CS3 445 aa13.98□□□□□ -0.17
COL2A1-201ENST00000337299 DTNAQ9Y4J8 743 aa13.98□□□□□ -0.17
COL2A1-201ENST00000337299 PFASO15067 1338 aa13.98□□□□□ -0.17
COL2A1-201ENST00000337299 MMP10P09238 476 aa13.98□□□□□ -0.17
COL2A1-201ENST00000337299 CREB1P16220 341 aa13.98□□□□□ -0.17
COL2A1-201ENST00000337299 POLD1P28340 1107 aa13.98□□□□□ -0.17
COL2A1-201ENST00000337299 ITPK1Q13572 414 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms