RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 MYL7Q01449 175 aa23.28■■□□□ 1.32
TPM1-204ENST00000334895 FKBP15Q5T1M5 1219 aa23.28■■□□□ 1.32
TPM1-204ENST00000334895 TDRD10Q5VZ19 366 aaKnown RBP23.28■■□□□ 1.32
TPM1-204ENST00000334895 VSTM4Q8IW00 320 aa23.28■■□□□ 1.32
TPM1-204ENST00000334895 CD302Q8IX05 232 aa23.28■■□□□ 1.32
TPM1-204ENST00000334895 ZFP42Q96MM3 310 aa23.28■■□□□ 1.32
TPM1-204ENST00000334895 CRACR2AQ9BSW2 395 aa23.28■■□□□ 1.32
TPM1-204ENST00000334895 MTMR12Q9C0I1 747 aa23.28■■□□□ 1.32
TPM1-204ENST00000334895 SIK3Q9Y2K2 1263 aa23.28■■□□□ 1.32
TPM1-204ENST00000334895 TTC3P53804 2025 aa23.27■■□□□ 1.32
TPM1-204ENST00000334895 PMM2O15305 246 aa23.27■■□□□ 1.32
TPM1-204ENST00000334895 STX10O60499 249 aa23.27■■□□□ 1.32
TPM1-204ENST00000334895 TPM3P06753 285 aa23.27■■□□□ 1.32
TPM1-204ENST00000334895 AFF1P51825 1210 aaKnown RBP23.27■■□□□ 1.32
TPM1-204ENST00000334895 SYCP1Q15431 976 aa23.27■■□□□ 1.32
TPM1-204ENST00000334895 ZACNQ401N2 412 aa23.27■■□□□ 1.32
TPM1-204ENST00000334895 KRT39Q6A163 491 aa23.27■■□□□ 1.32
TPM1-204ENST00000334895 HACE1Q8IYU2 909 aa23.27■■□□□ 1.32
TPM1-204ENST00000334895 RNF169Q8NCN4 708 aa23.27■■□□□ 1.32
TPM1-204ENST00000334895 GSTCDQ8NEC7 633 aa23.27■■□□□ 1.32
TPM1-204ENST00000334895 BADQ92934 168 aa23.27■■□□□ 1.32
TPM1-204ENST00000334895 GIT1Q9Y2X7 761 aa23.27■■□□□ 1.32
TPM1-204ENST00000334895 A0A1W2PQC6 194 aa23.26■■□□□ 1.31
TPM1-204ENST00000334895 PTGESO14684 152 aa23.26■■□□□ 1.31
TPM1-204ENST00000334895 LRRN2O75325 713 aa23.26■■□□□ 1.31
TPM1-204ENST00000334895 ACRP10323 421 aa23.26■■□□□ 1.31
TPM1-204ENST00000334895 MLH1P40692 756 aa23.26■■□□□ 1.31
TPM1-204ENST00000334895 TFAMQ00059 246 aaKnown RBP23.26■■□□□ 1.31
TPM1-204ENST00000334895 GLRA4Q5JXX5 417 aa23.26■■□□□ 1.31
TPM1-204ENST00000334895 DPY19L2P1Q6NXN4 242 aa23.26■■□□□ 1.31
TPM1-204ENST00000334895 CRIPAKQ8N1N5 446 aa23.26■■□□□ 1.31
TPM1-204ENST00000334895 TAS1R2Q8TE23 839 aa23.26■■□□□ 1.31
TPM1-204ENST00000334895 GAD1Q99259 594 aa23.26■■□□□ 1.31
TPM1-204ENST00000334895 C2CD2Q9Y426 696 aa23.26■■□□□ 1.31
TPM1-204ENST00000334895 SMIM28A0A1B0GU29 152 aa23.26■■□□□ 1.31
TPM1-204ENST00000334895 GTPBP10A4D1E9 387 aaKnown RBP23.26■■□□□ 1.31
TPM1-204ENST00000334895 P4HA2O15460 535 aa23.26■■□□□ 1.31
TPM1-204ENST00000334895 N4BP1O75113 896 aaKnown RBP23.26■■□□□ 1.31
TPM1-204ENST00000334895 KCNE1P15382 129 aa23.26■■□□□ 1.31
TPM1-204ENST00000334895 CDC25BP30305 580 aa23.26■■□□□ 1.31
TPM1-204ENST00000334895 TMEM132DQ14C87 1099 aa23.26■■□□□ 1.31
TPM1-204ENST00000334895 ZBTB6Q15916 424 aa23.26■■□□□ 1.31
TPM1-204ENST00000334895 EPC2Q52LR7 807 aa23.26■■□□□ 1.31
TPM1-204ENST00000334895 C16orf59Q7L2K0 433 aa23.26■■□□□ 1.31
TPM1-204ENST00000334895 LMO3Q8TAP4 145 aa23.26■■□□□ 1.31
TPM1-204ENST00000334895 PGBD4Q96DM1 585 aa23.26■■□□□ 1.31
TPM1-204ENST00000334895 KIF12Q96FN5 646 aa23.26■■□□□ 1.31
TPM1-204ENST00000334895 RSAD1Q9HA92 442 aa23.26■■□□□ 1.31
TPM1-204ENST00000334895 IL23AQ9NPF7 189 aa23.26■■□□□ 1.31
TPM1-204ENST00000334895 PLAGL2Q9UPG8 496 aa23.26■■□□□ 1.31
TPM1-204ENST00000334895 COQ4Q9Y3A0 265 aa23.26■■□□□ 1.31
TPM1-204ENST00000334895 VNN1O95497 513 aa23.25■■□□□ 1.31
TPM1-204ENST00000334895 EOMESO95936 686 aa23.25■■□□□ 1.31
TPM1-204ENST00000334895 AP3M2P53677 418 aa23.25■■□□□ 1.31
TPM1-204ENST00000334895 DUOXA2Q1HG44 320 aa23.25■■□□□ 1.31
TPM1-204ENST00000334895 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.25■■□□□ 1.31
TPM1-204ENST00000334895 TRAPPC11Q7Z392 1133 aa23.25■■□□□ 1.31
TPM1-204ENST00000334895 SEMA4DQ92854 862 aa23.25■■□□□ 1.31
TPM1-204ENST00000334895 TMEM161AQ9NX61 479 aa23.25■■□□□ 1.31
TPM1-204ENST00000334895 MIOSQ9NXC5 875 aa23.25■■□□□ 1.31
TPM1-204ENST00000334895 GCNT4Q9P109 453 aa23.25■■□□□ 1.31
TPM1-204ENST00000334895 DERAQ9Y315 318 aa23.25■■□□□ 1.31
TPM1-204ENST00000334895 ARL5CA6NH57 179 aa23.24■■□□□ 1.31
TPM1-204ENST00000334895 SLC9A1P19634 815 aa23.24■■□□□ 1.31
TPM1-204ENST00000334895 PON1P27169 355 aa23.24■■□□□ 1.31
TPM1-204ENST00000334895 GUCY2FP51841 1108 aa23.24■■□□□ 1.31
TPM1-204ENST00000334895 APBA1Q02410 837 aa23.24■■□□□ 1.31
TPM1-204ENST00000334895 IKBKEQ14164 716 aa23.24■■□□□ 1.31
TPM1-204ENST00000334895 EXOC3L4Q17RC7 722 aa23.24■■□□□ 1.31
TPM1-204ENST00000334895 GBP6Q6ZN66 633 aa23.24■■□□□ 1.31
TPM1-204ENST00000334895 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23.24■■□□□ 1.31
TPM1-204ENST00000334895 NT5DC4Q86YG4 428 aa23.24■■□□□ 1.31
TPM1-204ENST00000334895 RPUSD2Q8IZ73 545 aaKnown RBP23.24■■□□□ 1.31
TPM1-204ENST00000334895 C1orf127Q8N9H9 656 aa23.24■■□□□ 1.31
TPM1-204ENST00000334895 CXorf38Q8TB03 319 aa23.24■■□□□ 1.31
TPM1-204ENST00000334895 C18orf25Q96B23 403 aaPredicted RBP23.24■■□□□ 1.31
TPM1-204ENST00000334895 ELAC1Q9H777 363 aaKnown RBP23.24■■□□□ 1.31
TPM1-204ENST00000334895 PFKMP08237 780 aa23.23■■□□□ 1.31
TPM1-204ENST00000334895 TMEM191BP0C7N4 346 aa23.23■■□□□ 1.31
TPM1-204ENST00000334895 MAGEA10P43363 369 aaPredicted RBP23.23■■□□□ 1.31
TPM1-204ENST00000334895 EPHB4P54760 987 aa23.23■■□□□ 1.31
TPM1-204ENST00000334895 CLLU1OSQ5K130 101 aa23.23■■□□□ 1.31
TPM1-204ENST00000334895 ANKRD36BP1Q96IX9 119 aa23.23■■□□□ 1.31
TPM1-204ENST00000334895 PDLIM2Q96JY6 352 aa23.23■■□□□ 1.31
TPM1-204ENST00000334895 PPP1R10Q96QC0 940 aaKnown RBP23.23■■□□□ 1.31
TPM1-204ENST00000334895 SIX2Q9NPC8 291 aa23.23■■□□□ 1.31
TPM1-204ENST00000334895 TUBGCP4Q9UGJ1 667 aa23.23■■□□□ 1.31
TPM1-204ENST00000334895 SIX4Q9UIU6 781 aa23.23■■□□□ 1.31
TPM1-204ENST00000334895 EPHB6O15197 1021 aa23.22■■□□□ 1.31
TPM1-204ENST00000334895 INPPL1O15357 1258 aa23.22■■□□□ 1.31
TPM1-204ENST00000334895 OFD1O75665 1012 aa23.22■■□□□ 1.31
TPM1-204ENST00000334895 FGFR1P11362 822 aa23.22■■□□□ 1.31
TPM1-204ENST00000334895 ACTN1P12814 892 aa23.22■■□□□ 1.31
TPM1-204ENST00000334895 SCNN1GP51170 649 aa23.22■■□□□ 1.31
TPM1-204ENST00000334895 FPGSQ05932 587 aa23.22■■□□□ 1.31
TPM1-204ENST00000334895 SOX4Q06945 474 aaPredicted RBP23.22■■□□□ 1.31
TPM1-204ENST00000334895 BIRC3Q13489 604 aa23.22■■□□□ 1.31
TPM1-204ENST00000334895 NAB2Q15742 525 aa23.22■■□□□ 1.31
TPM1-204ENST00000334895 SPECC1LQ69YQ0 1117 aa23.22■■□□□ 1.31
TPM1-204ENST00000334895 TMC6Q7Z403 805 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms