RNA–Protein interactions for RNA: ENST00000332814.6

C11orf88-201, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS P4 TSL 5 BASIC

Gene C11orf88, Length 795 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-201ENST00000332814 ZNF507Q8TCN5 953 aa17.82■□□□□ 0.44
C11orf88-201ENST00000332814 PABPC5Q96DU9 382 aaKnown RBP17.82■□□□□ 0.44
C11orf88-201ENST00000332814 IPO9Q96P70 1041 aaKnown RBP17.82■□□□□ 0.44
C11orf88-201ENST00000332814 TSPAN18Q96SJ8 248 aa17.82■□□□□ 0.44
C11orf88-201ENST00000332814 EMILIN2Q9BXX0 1053 aa17.82■□□□□ 0.44
C11orf88-201ENST00000332814 IKZF4Q9H2S9 585 aa17.82■□□□□ 0.44
C11orf88-201ENST00000332814 UBE2ZQ9H832 354 aaPredicted RBP17.82■□□□□ 0.44
C11orf88-201ENST00000332814 GOLGA2P5Q9HBQ8 144 aa17.82■□□□□ 0.44
C11orf88-201ENST00000332814 UBQLN1Q9UMX0 589 aaKnown RBP17.82■□□□□ 0.44
C11orf88-201ENST00000332814 TCHHQ07283 1943 aa17.81■□□□□ 0.44
C11orf88-201ENST00000332814 TTC26A0AVF1 554 aa17.81■□□□□ 0.44
C11orf88-201ENST00000332814 LACTBL1A8MY62 500 aa17.81■□□□□ 0.44
C11orf88-201ENST00000332814 PODXLO00592 558 aa17.81■□□□□ 0.44
C11orf88-201ENST00000332814 PER2O15055 1255 aa17.81■□□□□ 0.44
C11orf88-201ENST00000332814 KINO60870 393 aaKnown RBP17.81■□□□□ 0.44
C11orf88-201ENST00000332814 B3GAT3O94766 335 aa17.81■□□□□ 0.44
C11orf88-201ENST00000332814 NDUFV1P49821 464 aa17.81■□□□□ 0.44
C11orf88-201ENST00000332814 CLCNKBP51801 687 aa17.81■□□□□ 0.44
C11orf88-201ENST00000332814 NAB2Q15742 525 aa17.81■□□□□ 0.44
C11orf88-201ENST00000332814 USP41Q3LFD5 358 aa17.81■□□□□ 0.44
C11orf88-201ENST00000332814 DCLRE1AQ6PJP8 1040 aa17.81■□□□□ 0.44
C11orf88-201ENST00000332814 EPM2AIP1Q7L775 607 aaPredicted RBP17.81■□□□□ 0.44
C11orf88-201ENST00000332814 MRPL43Q8N983 215 aaKnown RBP17.81■□□□□ 0.44
C11orf88-201ENST00000332814 SAAL1Q96ER3 474 aa17.81■□□□□ 0.44
C11orf88-201ENST00000332814 ZMAT2Q96NC0 199 aaKnown RBP17.81■□□□□ 0.44
C11orf88-201ENST00000332814 PAAF1Q9BRP4 392 aa17.81■□□□□ 0.44
C11orf88-201ENST00000332814 FAM213AQ9BRX8 229 aa17.81■□□□□ 0.44
C11orf88-201ENST00000332814 PCIF1Q9H4Z3 704 aa17.81■□□□□ 0.44
C11orf88-201ENST00000332814 NUB1Q9Y5A7 615 aa17.81■□□□□ 0.44
C11orf88-201ENST00000332814 C2orf71A6NGG8 1288 aa17.8■□□□□ 0.44
C11orf88-201ENST00000332814 HIDE1A8MVS5 230 aa17.8■□□□□ 0.44
C11orf88-201ENST00000332814 F8W810 466 aa17.8■□□□□ 0.44
C11orf88-201ENST00000332814 C2CD2LO14523 706 aa17.8■□□□□ 0.44
C11orf88-201ENST00000332814 TRAPPC3O43617 180 aa17.8■□□□□ 0.44
C11orf88-201ENST00000332814 KLRC4O43908 158 aa17.8■□□□□ 0.44
C11orf88-201ENST00000332814 FAM189A1O60320 539 aa17.8■□□□□ 0.44
C11orf88-201ENST00000332814 IL18RAPO95256 599 aa17.8■□□□□ 0.44
C11orf88-201ENST00000332814 SMC2O95347 1197 aa17.8■□□□□ 0.44
C11orf88-201ENST00000332814 KCNA5P22460 613 aa17.8■□□□□ 0.44
C11orf88-201ENST00000332814 ADSSP30520 456 aa17.8■□□□□ 0.44
C11orf88-201ENST00000332814 RPL9P32969 192 aaKnown RBP17.8■□□□□ 0.44
C11orf88-201ENST00000332814 SNRPFP62306 86 aaKnown RBP17.8■□□□□ 0.44
C11orf88-201ENST00000332814 MRPS5P82675 430 aaKnown RBP17.8■□□□□ 0.44
C11orf88-201ENST00000332814 POU5F1Q01860 360 aaKnown RBP17.8■□□□□ 0.44
C11orf88-201ENST00000332814 SPAG1Q07617 926 aa17.8■□□□□ 0.44
C11orf88-201ENST00000332814 DPYDQ12882 1025 aa17.8■□□□□ 0.44
C11orf88-201ENST00000332814 TMEM132DQ14C87 1099 aa17.8■□□□□ 0.44
C11orf88-201ENST00000332814 PTPN14Q15678 1187 aa17.8■□□□□ 0.44
C11orf88-201ENST00000332814 DUSP6Q16828 381 aa17.8■□□□□ 0.44
C11orf88-201ENST00000332814 GPD1LQ8N335 351 aa17.8■□□□□ 0.44
C11orf88-201ENST00000332814 EFHBQ8N7U6 833 aa17.8■□□□□ 0.44
C11orf88-201ENST00000332814 BEST2Q8NFU1 509 aa17.8■□□□□ 0.44
C11orf88-201ENST00000332814 SCFD1Q8WVM8 642 aa17.8■□□□□ 0.44
C11orf88-201ENST00000332814 ATXN2LQ8WWM7 1075 aaKnown RBP17.8■□□□□ 0.44
C11orf88-201ENST00000332814 AUTS2Q8WXX7 1259 aa17.8■□□□□ 0.44
C11orf88-201ENST00000332814 C18orf25Q96B23 403 aaPredicted RBP17.8■□□□□ 0.44
C11orf88-201ENST00000332814 TIGD1Q96MW7 591 aa17.8■□□□□ 0.44
C11orf88-201ENST00000332814 CBWD1Q9BRT8 395 aa17.8■□□□□ 0.44
C11orf88-201ENST00000332814 VN1R3Q9BXE9 311 aa17.8■□□□□ 0.44
C11orf88-201ENST00000332814 ASB7Q9H672 318 aa17.8■□□□□ 0.44
C11orf88-201ENST00000332814 RMND1Q9NWS8 449 aa17.8■□□□□ 0.44
C11orf88-201ENST00000332814 PRRC2BQ5JSZ5 2229 aaKnown RBP17.79■□□□□ 0.44
C11orf88-201ENST00000332814 MYO9BQ13459 2157 aa17.79■□□□□ 0.44
C11orf88-201ENST00000332814 GOLGA8IPA6NC78 632 aa17.79■□□□□ 0.44
C11orf88-201ENST00000332814 GOLGA8JA6NMD2 632 aa17.79■□□□□ 0.44
C11orf88-201ENST00000332814 TMEM189-UBE2V1I3L0A0 370 aa17.79■□□□□ 0.44
C11orf88-201ENST00000332814 EXTL3O43909 919 aa17.79■□□□□ 0.44
C11orf88-201ENST00000332814 GTF2F1P35269 517 aaKnown RBP eCLIP17.79■□□□□ 0.44
C11orf88-201ENST00000332814 CREMQ03060 361 aa17.79■□□□□ 0.44
C11orf88-201ENST00000332814 SOX4Q06945 474 aaPredicted RBP17.79■□□□□ 0.44
C11orf88-201ENST00000332814 STK4Q13043 487 aa17.79■□□□□ 0.44
C11orf88-201ENST00000332814 UPP1Q16831 310 aa17.79■□□□□ 0.44
C11orf88-201ENST00000332814 KNOP1Q1ED39 458 aaKnown RBP17.79■□□□□ 0.44
C11orf88-201ENST00000332814 BMT2Q1RMZ1 405 aa17.79■□□□□ 0.44
C11orf88-201ENST00000332814 CEP57Q86XR8 500 aa17.79■□□□□ 0.44
C11orf88-201ENST00000332814 GOLGA5Q8TBA6 731 aa17.79■□□□□ 0.44
C11orf88-201ENST00000332814 GPR62Q9BZJ7 368 aa17.79■□□□□ 0.44
C11orf88-201ENST00000332814 RBAKQ9NYW8 714 aaPredicted RBP17.79■□□□□ 0.44
C11orf88-201ENST00000332814 CGNQ9P2M7 1197 aaKnown RBP17.79■□□□□ 0.44
C11orf88-201ENST00000332814 TUBGCP4Q9UGJ1 667 aa17.79■□□□□ 0.44
C11orf88-201ENST00000332814 DERAQ9Y315 318 aa17.79■□□□□ 0.44
C11orf88-201ENST00000332814 IRAK3Q9Y616 596 aa17.79■□□□□ 0.44
C11orf88-201ENST00000332814 CHD7Q9P2D1 2997 aa17.79■□□□□ 0.44
C11orf88-201ENST00000332814 SPDYE4A6NLX3 237 aa17.78■□□□□ 0.44
C11orf88-201ENST00000332814 RHOBTB3O94955 611 aa17.78■□□□□ 0.44
C11orf88-201ENST00000332814 CYP3A5P20815 502 aa17.78■□□□□ 0.44
C11orf88-201ENST00000332814 MCM4P33991 863 aa17.78■□□□□ 0.44
C11orf88-201ENST00000332814 TFF2Q03403 129 aa17.78■□□□□ 0.44
C11orf88-201ENST00000332814 PNOCQ13519 176 aa17.78■□□□□ 0.44
C11orf88-201ENST00000332814 SNW1Q13573 536 aaKnown RBP17.78■□□□□ 0.44
C11orf88-201ENST00000332814 KCNB1Q14721 858 aa17.78■□□□□ 0.44
C11orf88-201ENST00000332814 FAM171A1Q5VUB5 890 aa17.78■□□□□ 0.44
C11orf88-201ENST00000332814 JADE1Q6IE81 842 aa17.78■□□□□ 0.44
C11orf88-201ENST00000332814 LLGL2Q6P1M3 1020 aa17.78■□□□□ 0.44
C11orf88-201ENST00000332814 PPFIBP1Q86W92 1011 aa17.78■□□□□ 0.44
C11orf88-201ENST00000332814 KIAA0895Q8NCT3 520 aa17.78■□□□□ 0.44
C11orf88-201ENST00000332814 ENGASEQ8NFI3 743 aa17.78■□□□□ 0.44
C11orf88-201ENST00000332814 RIN2Q8WYP3 895 aaPredicted RBP17.78■□□□□ 0.44
C11orf88-201ENST00000332814 KIAA1586Q9HCI6 787 aa17.78■□□□□ 0.44
C11orf88-201ENST00000332814 TSHZ2Q9NRE2 1034 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms