RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 KCTD19Q17RG1 926 aaPredicted RBP18.65■□□□□ 0.58
DDX28-201ENST00000332395 SPOPLQ6IQ16 392 aa18.65■□□□□ 0.58
DDX28-201ENST00000332395 MOB2Q70IA6 237 aa18.65■□□□□ 0.58
DDX28-201ENST00000332395 NEUROG2Q9H2A3 272 aa18.65■□□□□ 0.58
DDX28-201ENST00000332395 AZI2Q9H6S1 392 aa18.65■□□□□ 0.58
DDX28-201ENST00000332395 TXNRD2Q9NNW7 524 aa18.65■□□□□ 0.58
DDX28-201ENST00000332395 UTP11Q9Y3A2 253 aaKnown RBP18.65■□□□□ 0.58
DDX28-201ENST00000332395 PCDHB2Q9Y5E7 798 aa18.65■□□□□ 0.58
DDX28-201ENST00000332395 ARIH2O95376 493 aa18.64■□□□□ 0.57
DDX28-201ENST00000332395 COPB2P35606 906 aa18.64■□□□□ 0.57
DDX28-201ENST00000332395 ARL8AQ96BM9 186 aa18.64■□□□□ 0.57
DDX28-201ENST00000332395 FAM167AQ96KS9 214 aa18.64■□□□□ 0.57
DDX28-201ENST00000332395 FGD4Q96M96 766 aa18.64■□□□□ 0.57
DDX28-201ENST00000332395 MPHOSPH6Q99547 160 aaKnown RBP18.64■□□□□ 0.57
DDX28-201ENST00000332395 CNOT8Q9UFF9 292 aaKnown RBP18.64■□□□□ 0.57
DDX28-201ENST00000332395 SPOPO43791 374 aa18.64■□□□□ 0.57
DDX28-201ENST00000332395 KRT14P02533 472 aa18.64■□□□□ 0.57
DDX28-201ENST00000332395 UNGP13051 313 aaPredicted RBP18.64■□□□□ 0.57
DDX28-201ENST00000332395 TTMPQ5BVD1 217 aa18.64■□□□□ 0.57
DDX28-201ENST00000332395 ZNF677Q86XU0 584 aa18.64■□□□□ 0.57
DDX28-201ENST00000332395 PRPF31Q8WWY3 499 aaKnown RBP18.64■□□□□ 0.57
DDX28-201ENST00000332395 CGRRF1Q99675 332 aa18.64■□□□□ 0.57
DDX28-201ENST00000332395 KCNH4Q9UQ05 1017 aa18.64■□□□□ 0.57
DDX28-201ENST00000332395 CNTNAP2Q9UHC6 1331 aa18.63■□□□□ 0.57
DDX28-201ENST00000332395 SOCS7O14512 581 aa18.63■□□□□ 0.57
DDX28-201ENST00000332395 MARK3P27448 753 aa18.63■□□□□ 0.57
DDX28-201ENST00000332395 CTNNA1P35221 906 aaKnown RBP18.63■□□□□ 0.57
DDX28-201ENST00000332395 DR1Q01658 176 aa18.63■□□□□ 0.57
DDX28-201ENST00000332395 CPNE8Q86YQ8 564 aa18.63■□□□□ 0.57
DDX28-201ENST00000332395 GLG1Q92896 1179 aa18.63■□□□□ 0.57
DDX28-201ENST00000332395 CDCA5Q96FF9 252 aa18.63■□□□□ 0.57
DDX28-201ENST00000332395 TRIM51Q9BSJ1 452 aa18.63■□□□□ 0.57
DDX28-201ENST00000332395 FAM114A2Q9NRY5 505 aa18.63■□□□□ 0.57
DDX28-201ENST00000332395 RBPJLQ9UBG7 517 aa18.63■□□□□ 0.57
DDX28-201ENST00000332395 PPME1Q9Y570 386 aa18.63■□□□□ 0.57
DDX28-201ENST00000332395 HARSP12081 509 aaKnown RBP18.62■□□□□ 0.57
DDX28-201ENST00000332395 HSPA6P17066 643 aa18.62■□□□□ 0.57
DDX28-201ENST00000332395 NF2P35240 595 aa18.62■□□□□ 0.57
DDX28-201ENST00000332395 BPIFB4P59827 614 aa18.62■□□□□ 0.57
DDX28-201ENST00000332395 CUL2Q13617 745 aa18.62■□□□□ 0.57
DDX28-201ENST00000332395 TTLL12Q14166 644 aaPredicted RBP18.62■□□□□ 0.57
DDX28-201ENST00000332395 HSDL1Q3SXM5 330 aa18.62■□□□□ 0.57
DDX28-201ENST00000332395 SEZ6Q53EL9 994 aa18.62■□□□□ 0.57
DDX28-201ENST00000332395 SEL1L2Q5TEA6 688 aa18.62■□□□□ 0.57
DDX28-201ENST00000332395 ZPBP2Q6X784 338 aa18.62■□□□□ 0.57
DDX28-201ENST00000332395 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.62■□□□□ 0.57
DDX28-201ENST00000332395 TRIM50Q86XT4 487 aa18.62■□□□□ 0.57
DDX28-201ENST00000332395 CD302Q8IX05 232 aa18.62■□□□□ 0.57
DDX28-201ENST00000332395 LRRC45Q96CN5 670 aa18.62■□□□□ 0.57
DDX28-201ENST00000332395 GPR20Q99678 358 aa18.62■□□□□ 0.57
DDX28-201ENST00000332395 RAB17Q9H0T7 212 aa18.62■□□□□ 0.57
DDX28-201ENST00000332395 APOBEC3GQ9HC16 384 aaKnown RBP18.62■□□□□ 0.57
DDX28-201ENST00000332395 TTLL13PA6NNM8 815 aa18.62■□□□□ 0.57
DDX28-201ENST00000332395 CLDN3O15551 220 aa18.62■□□□□ 0.57
DDX28-201ENST00000332395 ACO1P21399 889 aaKnown RBP18.62■□□□□ 0.57
DDX28-201ENST00000332395 CTNNA2P26232 953 aa18.62■□□□□ 0.57
DDX28-201ENST00000332395 EFNA5P52803 228 aa18.62■□□□□ 0.57
DDX28-201ENST00000332395 PPIL2Q13356 520 aa18.62■□□□□ 0.57
DDX28-201ENST00000332395 Q3C1V9 767 aa18.62■□□□□ 0.57
DDX28-201ENST00000332395 KCNV1Q6PIU1 500 aa18.62■□□□□ 0.57
DDX28-201ENST00000332395 FHDC1Q9C0D6 1143 aaPredicted RBP18.62■□□□□ 0.57
DDX28-201ENST00000332395 DPH5Q9H2P9 285 aa18.62■□□□□ 0.57
DDX28-201ENST00000332395 PCDHA3Q9Y5H8 950 aa18.62■□□□□ 0.57
DDX28-201ENST00000332395 NOP56O00567 594 aaKnown RBP18.61■□□□□ 0.57
DDX28-201ENST00000332395 PYGMP11217 842 aa18.61■□□□□ 0.57
DDX28-201ENST00000332395 DHX34Q14147 1143 aaKnown RBP18.61■□□□□ 0.57
DDX28-201ENST00000332395 KCTD2Q14681 263 aa18.61■□□□□ 0.57
DDX28-201ENST00000332395 CELF3Q5SZQ8 465 aaKnown RBP18.61■□□□□ 0.57
DDX28-201ENST00000332395 IER5Q5VY09 327 aa18.61■□□□□ 0.57
DDX28-201ENST00000332395 MCOLN2Q8IZK6 566 aa18.61■□□□□ 0.57
DDX28-201ENST00000332395 OR5B17Q8NGF7 314 aa18.61■□□□□ 0.57
DDX28-201ENST00000332395 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.61■□□□□ 0.57
DDX28-201ENST00000332395 DNAJC25-GNG10A0A024R161 153 aa18.61■□□□□ 0.57
DDX28-201ENST00000332395 MSCO60682 206 aa18.61■□□□□ 0.57
DDX28-201ENST00000332395 PHF2O75151 1096 aa18.61■□□□□ 0.57
DDX28-201ENST00000332395 LGR5O75473 907 aa18.61■□□□□ 0.57
DDX28-201ENST00000332395 HSD17B3P37058 310 aa18.61■□□□□ 0.57
DDX28-201ENST00000332395 MOGSQ13724 837 aa18.61■□□□□ 0.57
DDX28-201ENST00000332395 PRELID2Q8N945 189 aa18.61■□□□□ 0.57
DDX28-201ENST00000332395 CPA5Q8WXQ8 436 aa18.61■□□□□ 0.57
DDX28-201ENST00000332395 MMP19Q99542 508 aa18.61■□□□□ 0.57
DDX28-201ENST00000332395 MRPL4Q9BYD3 311 aaKnown RBP18.61■□□□□ 0.57
DDX28-201ENST00000332395 TRIM31Q9BZY9 425 aa18.61■□□□□ 0.57
DDX28-201ENST00000332395 CCDC113Q9H0I3 377 aa18.61■□□□□ 0.57
DDX28-201ENST00000332395 PLAAQ9Y263 795 aa18.61■□□□□ 0.57
DDX28-201ENST00000332395 FAM187AA6NFU0 413 aa18.6■□□□□ 0.57
DDX28-201ENST00000332395 CLTAP09496 248 aa18.6■□□□□ 0.57
DDX28-201ENST00000332395 FLT3P36888 993 aa18.6■□□□□ 0.57
DDX28-201ENST00000332395 NOP14P78316 857 aaKnown RBP18.6■□□□□ 0.57
DDX28-201ENST00000332395 LAMTOR4Q0VGL1 99 aa18.6■□□□□ 0.57
DDX28-201ENST00000332395 MKRN4PQ13434 485 aaPredicted RBP18.6■□□□□ 0.57
DDX28-201ENST00000332395 CDCA2Q69YH5 1023 aaPredicted RBP18.6■□□□□ 0.57
DDX28-201ENST00000332395 BRSK2Q8IWQ3 736 aa18.6■□□□□ 0.57
DDX28-201ENST00000332395 ATP8B4Q8TF62 1192 aa18.6■□□□□ 0.57
DDX28-201ENST00000332395 TCP11Q8WWU5 503 aa18.6■□□□□ 0.57
DDX28-201ENST00000332395 OPTNQ96CV9 577 aa18.6■□□□□ 0.57
DDX28-201ENST00000332395 ERP44Q9BS26 406 aa18.6■□□□□ 0.57
DDX28-201ENST00000332395 AVENQ9NQS1 362 aaPredicted RBP18.6■□□□□ 0.57
DDX28-201ENST00000332395 ANAPC7Q9UJX3 599 aa18.6■□□□□ 0.57
DDX28-201ENST00000332395 PCDHB4Q9Y5E5 795 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms