RNA–Protein interactions for RNA: ENST00000331563.6

PKP3-201, Transcript of plakophilin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKP3, Length 2,809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-201ENST00000331563 MARK3P27448 753 aa19.31■□□□□ 0.68
PKP3-201ENST00000331563 DEUP1Q05D60 604 aa19.31■□□□□ 0.68
PKP3-201ENST00000331563 EPHA7Q15375 998 aa19.31■□□□□ 0.68
PKP3-201ENST00000331563 KHDC1Q4VXA5 237 aaKnown RBP19.31■□□□□ 0.68
PKP3-201ENST00000331563 DPY19L2P1Q6NXN4 242 aa19.31■□□□□ 0.68
PKP3-201ENST00000331563 PPP4R3CPQ6ZMV5 832 aa19.31■□□□□ 0.68
PKP3-201ENST00000331563 EPM2AIP1Q7L775 607 aaPredicted RBP19.31■□□□□ 0.68
PKP3-201ENST00000331563 CYP4X1Q8N118 509 aa19.31■□□□□ 0.68
PKP3-201ENST00000331563 FAM192AQ9GZU8 254 aa19.31■□□□□ 0.68
PKP3-201ENST00000331563 TCP10L2B9ZVM9 353 aa19.31■□□□□ 0.68
PKP3-201ENST00000331563 ZBTB7AO95365 584 aa19.31■□□□□ 0.68
PKP3-201ENST00000331563 COILP38432 576 aaPredicted RBP19.31■□□□□ 0.68
PKP3-201ENST00000331563 JAG1P78504 1218 aa19.31■□□□□ 0.68
PKP3-201ENST00000331563 RASA3Q14644 834 aa19.31■□□□□ 0.68
PKP3-201ENST00000331563 SPOCK2Q92563 424 aa19.31■□□□□ 0.68
PKP3-201ENST00000331563 SPZ1Q9BXG8 430 aa19.31■□□□□ 0.68
PKP3-201ENST00000331563 TAS2R14Q9NYV8 317 aa19.31■□□□□ 0.68
PKP3-201ENST00000331563 NCANO14594 1321 aa19.3■□□□□ 0.68
PKP3-201ENST00000331563 TCRBV7S2A1N4TA0A589 114 aa19.3■□□□□ 0.68
PKP3-201ENST00000331563 FAM200BP0CF97 657 aa19.3■□□□□ 0.68
PKP3-201ENST00000331563 DPEP1P16444 411 aa19.3■□□□□ 0.68
PKP3-201ENST00000331563 HMGB2P26583 209 aaKnown RBP19.3■□□□□ 0.68
PKP3-201ENST00000331563 CASP5P51878 434 aa19.3■□□□□ 0.68
PKP3-201ENST00000331563 YARSP54577 528 aaKnown RBP19.3■□□□□ 0.68
PKP3-201ENST00000331563 JAM2P57087 298 aa19.3■□□□□ 0.68
PKP3-201ENST00000331563 PPFIBP2Q8ND30 876 aa19.3■□□□□ 0.68
PKP3-201ENST00000331563 DTX3LQ8TDB6 740 aa19.3■□□□□ 0.68
PKP3-201ENST00000331563 PTPRN2Q92932 1015 aa19.3■□□□□ 0.68
PKP3-201ENST00000331563 SLC7A6OSQ96CW6 309 aaPredicted RBP19.3■□□□□ 0.68
PKP3-201ENST00000331563 SLCO1B3Q9NPD5 702 aa19.3■□□□□ 0.68
PKP3-201ENST00000331563 COG5Q9UP83 839 aa19.3■□□□□ 0.68
PKP3-201ENST00000331563 SPAG7O75391 227 aa19.3■□□□□ 0.68
PKP3-201ENST00000331563 AKAP3O75969 853 aa19.3■□□□□ 0.68
PKP3-201ENST00000331563 MESDQ14696 234 aa19.3■□□□□ 0.68
PKP3-201ENST00000331563 CDAN1Q8IWY9 1227 aa19.3■□□□□ 0.68
PKP3-201ENST00000331563 ZDHHC14Q8IZN3 488 aa19.3■□□□□ 0.68
PKP3-201ENST00000331563 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.3■□□□□ 0.68
PKP3-201ENST00000331563 CHORDC1Q9UHD1 332 aaPredicted RBP19.3■□□□□ 0.68
PKP3-201ENST00000331563 PCDHA12Q9UN75 941 aa19.3■□□□□ 0.68
PKP3-201ENST00000331563 USP20Q9Y2K6 914 aa19.3■□□□□ 0.68
PKP3-201ENST00000331563 RASA4BC9J798 803 aa19.29■□□□□ 0.68
PKP3-201ENST00000331563 USP17L10C9JJH3 530 aa19.29■□□□□ 0.68
PKP3-201ENST00000331563 RASA4O43374 803 aa19.29■□□□□ 0.68
PKP3-201ENST00000331563 SOX5P35711 763 aa19.29■□□□□ 0.68
PKP3-201ENST00000331563 CDR2Q01850 454 aa19.29■□□□□ 0.68
PKP3-201ENST00000331563 ORC2Q13416 577 aaPredicted RBP19.29■□□□□ 0.68
PKP3-201ENST00000331563 UBE2SQ16763 222 aa19.29■□□□□ 0.68
PKP3-201ENST00000331563 CYFIP1Q7L576 1253 aa19.29■□□□□ 0.68
PKP3-201ENST00000331563 ADGRF4Q8IZF3 695 aa19.29■□□□□ 0.68
PKP3-201ENST00000331563 SIX2Q9NPC8 291 aa19.29■□□□□ 0.68
PKP3-201ENST00000331563 PCDHA2Q9Y5H9 948 aa19.29■□□□□ 0.68
PKP3-201ENST00000331563 PCNTO95613 3336 aa19.29■□□□□ 0.68
PKP3-201ENST00000331563 PPP1R11O60927 126 aaPredicted RBP19.29■□□□□ 0.68
PKP3-201ENST00000331563 EYA4O95677 639 aa19.29■□□□□ 0.68
PKP3-201ENST00000331563 UBTFL6P0CB48 400 aaPredicted RBP19.29■□□□□ 0.68
PKP3-201ENST00000331563 EEF2P13639 858 aaKnown RBP19.29■□□□□ 0.68
PKP3-201ENST00000331563 CHKAP35790 457 aa19.29■□□□□ 0.68
PKP3-201ENST00000331563 DRAP1Q14919 205 aaPredicted RBP19.29■□□□□ 0.68
PKP3-201ENST00000331563 TAF1BQ53T94 588 aaPredicted RBP19.29■□□□□ 0.68
PKP3-201ENST00000331563 RFWD3Q6PCD5 774 aa19.29■□□□□ 0.68
PKP3-201ENST00000331563 IWS1Q96ST2 819 aa19.29■□□□□ 0.68
PKP3-201ENST00000331563 PCDHA3Q9Y5H8 950 aa19.29■□□□□ 0.68
PKP3-201ENST00000331563 IGKV6D-41A0A0C4DH26 115 aa19.29■□□□□ 0.68
PKP3-201ENST00000331563 CAPN9O14815 690 aa19.29■□□□□ 0.68
PKP3-201ENST00000331563 CLIC2O15247 247 aa19.29■□□□□ 0.68
PKP3-201ENST00000331563 CTNNA2P26232 953 aa19.29■□□□□ 0.68
PKP3-201ENST00000331563 CASP4P49662 377 aa19.29■□□□□ 0.68
PKP3-201ENST00000331563 PABPC4Q13310 644 aaKnown RBP eCLIP19.29■□□□□ 0.687e-8■■■■□ 24.8
PKP3-201ENST00000331563 TMED2Q15363 201 aa19.29■□□□□ 0.68
PKP3-201ENST00000331563 TRIP13Q15645 432 aaPredicted RBP19.29■□□□□ 0.68
PKP3-201ENST00000331563 ARHGAP44Q17R89 818 aa19.29■□□□□ 0.68
PKP3-201ENST00000331563 CERKLQ49MI3 558 aaPredicted RBP19.29■□□□□ 0.68
PKP3-201ENST00000331563 ANKRD35Q8N283 1001 aa19.29■□□□□ 0.68
PKP3-201ENST00000331563 SLC30A5Q8TAD4 765 aa19.29■□□□□ 0.68
PKP3-201ENST00000331563 AZIN2Q96A70 460 aa19.29■□□□□ 0.68
PKP3-201ENST00000331563 NAALADL1Q9UQQ1 740 aa19.29■□□□□ 0.68
PKP3-201ENST00000331563 ATF5Q9Y2D1 282 aaPredicted RBP19.29■□□□□ 0.68
PKP3-201ENST00000331563 GSTTP1A0A1W2PQM5 241 aa19.28■□□□□ 0.68
PKP3-201ENST00000331563 POTEB3A0JP26 581 aa19.28■□□□□ 0.68
PKP3-201ENST00000331563 MAGEA13PA6NCF6 341 aa19.28■□□□□ 0.68
PKP3-201ENST00000331563 MIF4GDA9UHW6 222 aaKnown RBP19.28■□□□□ 0.68
PKP3-201ENST00000331563 POTECB2RU33 542 aa19.28■□□□□ 0.68
PKP3-201ENST00000331563 PFDN1O60925 122 aa19.28■□□□□ 0.68
PKP3-201ENST00000331563 TTC4O95801 387 aa19.28■□□□□ 0.68
PKP3-201ENST00000331563 T-ENOLP0DO92 83 aa19.28■□□□□ 0.68
PKP3-201ENST00000331563 RPL13P26373 211 aaKnown RBP19.28■□□□□ 0.68
PKP3-201ENST00000331563 VPS41P49754 854 aa19.28■□□□□ 0.68
PKP3-201ENST00000331563 POTEBQ6S5H4 581 aa19.28■□□□□ 0.68
PKP3-201ENST00000331563 STMN2Q93045 179 aa19.28■□□□□ 0.68
PKP3-201ENST00000331563 TIPINQ9BVW5 301 aa19.28■□□□□ 0.68
PKP3-201ENST00000331563 JMJD4Q9H9V9 463 aa19.28■□□□□ 0.68
PKP3-201ENST00000331563 DDX25Q9UHL0 483 aaKnown RBP19.28■□□□□ 0.68
PKP3-201ENST00000331563 ZFP69BQ9UJL9 534 aa19.28■□□□□ 0.68
PKP3-201ENST00000331563 STARD13Q9Y3M8 1113 aa19.28■□□□□ 0.68
PKP3-201ENST00000331563 CALUO43852 315 aaPredicted RBP19.28■□□□□ 0.68
PKP3-201ENST00000331563 BPIFB4P59827 614 aa19.28■□□□□ 0.68
PKP3-201ENST00000331563 MCL1Q07820 350 aa19.28■□□□□ 0.68
PKP3-201ENST00000331563 KNOP1Q1ED39 458 aaKnown RBP19.28■□□□□ 0.68
PKP3-201ENST00000331563 LARGE2Q8N3Y3 721 aa19.28■□□□□ 0.68
PKP3-201ENST00000331563 TTLL6Q8N841 843 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms