RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 CASP8Q14790 479 aa17.04■□□□□ 0.32
PDGFB-201ENST00000331163 PDXDC1Q6P996 788 aa17.04■□□□□ 0.32
PDGFB-201ENST00000331163 DAAM2Q86T65 1068 aa17.04■□□□□ 0.32
PDGFB-201ENST00000331163 PACS2Q86VP3 889 aa17.04■□□□□ 0.32
PDGFB-201ENST00000331163 RPUSD2Q8IZ73 545 aaKnown RBP17.04■□□□□ 0.32
PDGFB-201ENST00000331163 PARD3BQ8TEW8 1205 aa17.04■□□□□ 0.32
PDGFB-201ENST00000331163 C2orf40Q9H1Z8 148 aa17.04■□□□□ 0.32
PDGFB-201ENST00000331163 KCND1Q9NSA2 647 aa17.04■□□□□ 0.32
PDGFB-201ENST00000331163 CEP72Q9P209 647 aa17.04■□□□□ 0.32
PDGFB-201ENST00000331163 ARHGAP20Q9P2F6 1191 aa17.04■□□□□ 0.32
PDGFB-201ENST00000331163 PCDHA13Q9Y5I0 950 aa17.04■□□□□ 0.32
PDGFB-201ENST00000331163 POMCP01189 267 aa17.04■□□□□ 0.32
PDGFB-201ENST00000331163 LIG3P49916 1009 aa17.04■□□□□ 0.32
PDGFB-201ENST00000331163 RSRC2Q7L4I2 434 aaKnown RBP17.04■□□□□ 0.32
PDGFB-201ENST00000331163 PANX2Q96RD6 677 aa17.04■□□□□ 0.32
PDGFB-201ENST00000331163 FAM49BQ9NUQ9 324 aa17.04■□□□□ 0.32
PDGFB-201ENST00000331163 APEX2Q9UBZ4 518 aa17.04■□□□□ 0.32
PDGFB-201ENST00000331163 ATP8B1O43520 1251 aa17.03■□□□□ 0.32
PDGFB-201ENST00000331163 CCDC172P0C7W6 258 aa17.03■□□□□ 0.32
PDGFB-201ENST00000331163 GRK4P32298 578 aa17.03■□□□□ 0.32
PDGFB-201ENST00000331163 CYP24A1Q07973 514 aa17.03■□□□□ 0.32
PDGFB-201ENST00000331163 PTGISQ16647 500 aa17.03■□□□□ 0.32
PDGFB-201ENST00000331163 DUOXA2Q1HG44 320 aa17.03■□□□□ 0.32
PDGFB-201ENST00000331163 ZCWPW2Q504Y3 356 aa17.03■□□□□ 0.32
PDGFB-201ENST00000331163 ZNF484Q5JVG2 852 aa17.03■□□□□ 0.32
PDGFB-201ENST00000331163 HEXIM2Q96MH2 286 aaKnown RBP17.03■□□□□ 0.32
PDGFB-201ENST00000331163 TRPV6Q9H1D0 765 aa17.03■□□□□ 0.32
PDGFB-201ENST00000331163 SPOPO43791 374 aa17.03■□□□□ 0.32
PDGFB-201ENST00000331163 POLR2BP30876 1174 aaKnown RBP17.03■□□□□ 0.32
PDGFB-201ENST00000331163 BCAR1P56945 870 aa17.03■□□□□ 0.32
PDGFB-201ENST00000331163 BRD3Q15059 726 aa17.03■□□□□ 0.32
PDGFB-201ENST00000331163 CEP57Q86XR8 500 aa17.03■□□□□ 0.32
PDGFB-201ENST00000331163 ZFP42Q96MM3 310 aa17.03■□□□□ 0.32
PDGFB-201ENST00000331163 NXF3Q9H4D5 531 aaKnown RBP17.03■□□□□ 0.32
PDGFB-201ENST00000331163 KCNG1Q9UIX4 513 aa17.03■□□□□ 0.32
PDGFB-201ENST00000331163 PTCH2Q9Y6C5 1203 aa17.03■□□□□ 0.32
PDGFB-201ENST00000331163 FKTNO75072 461 aa17.02■□□□□ 0.32
PDGFB-201ENST00000331163 TNNC1P63316 161 aa17.02■□□□□ 0.32
PDGFB-201ENST00000331163 MTFR1Q15390 333 aa17.02■□□□□ 0.32
PDGFB-201ENST00000331163 ICE2Q659A1 982 aa17.02■□□□□ 0.32
PDGFB-201ENST00000331163 NOA1Q8NC60 698 aaKnown RBP17.02■□□□□ 0.32
PDGFB-201ENST00000331163 ANKZF1Q9H8Y5 726 aa17.02■□□□□ 0.32
PDGFB-201ENST00000331163 ATP11BQ9Y2G3 1177 aa17.02■□□□□ 0.32
PDGFB-201ENST00000331163 PRG3Q9Y2Y8 225 aaPredicted RBP17.02■□□□□ 0.32
PDGFB-201ENST00000331163 I3L4J1 428 aa17.02■□□□□ 0.32
PDGFB-201ENST00000331163 EXTL3O43909 919 aa17.02■□□□□ 0.32
PDGFB-201ENST00000331163 NUMBP49757 651 aa17.02■□□□□ 0.32
PDGFB-201ENST00000331163 NOP14P78316 857 aaKnown RBP17.02■□□□□ 0.32
PDGFB-201ENST00000331163 PHLDB3Q6NSJ2 640 aa17.02■□□□□ 0.32
PDGFB-201ENST00000331163 B3GNT9Q6UX72 402 aa17.02■□□□□ 0.32
PDGFB-201ENST00000331163 TMEM139Q8IV31 216 aa17.02■□□□□ 0.32
PDGFB-201ENST00000331163 TAB3Q8N5C8 712 aaPredicted RBP17.02■□□□□ 0.32
PDGFB-201ENST00000331163 SEMA4DQ92854 862 aa17.02■□□□□ 0.32
PDGFB-201ENST00000331163 C11orf70Q9BRQ4 267 aa17.02■□□□□ 0.32
PDGFB-201ENST00000331163 CDC23Q9UJX2 597 aa17.02■□□□□ 0.32
PDGFB-201ENST00000331163 KBTBD13C9JR72 458 aa17.02■□□□□ 0.31
PDGFB-201ENST00000331163 SGPL1O95470 568 aa17.02■□□□□ 0.31
PDGFB-201ENST00000331163 H2AFZP0C0S5 128 aa17.02■□□□□ 0.31
PDGFB-201ENST00000331163 ARHGEF6Q15052 776 aa17.02■□□□□ 0.31
PDGFB-201ENST00000331163 ZNF667Q5HYK9 610 aa17.02■□□□□ 0.31
PDGFB-201ENST00000331163 H2AFVQ71UI9 128 aa17.02■□□□□ 0.31
PDGFB-201ENST00000331163 PLPPR4Q7Z2D5 763 aa17.02■□□□□ 0.31
PDGFB-201ENST00000331163 SLC47A2Q86VL8 602 aa17.02■□□□□ 0.31
PDGFB-201ENST00000331163 CEP112Q8N8E3 955 aa17.02■□□□□ 0.31
PDGFB-201ENST00000331163 SLC17A8Q8NDX2 589 aa17.02■□□□□ 0.31
PDGFB-201ENST00000331163 ERGIC2Q96RQ1 377 aa17.02■□□□□ 0.31
PDGFB-201ENST00000331163 AJAP1Q9UKB5 411 aaPredicted RBP17.02■□□□□ 0.31
PDGFB-201ENST00000331163 SBF1O95248 1867 aa17.02■□□□□ 0.31
PDGFB-201ENST00000331163 A0A1W2PQC6 194 aa17.01■□□□□ 0.31
PDGFB-201ENST00000331163 OGTO15294 1046 aa17.01■□□□□ 0.31
PDGFB-201ENST00000331163 NFICP08651 508 aa17.01■□□□□ 0.31
PDGFB-201ENST00000331163 ZNF131P52739 623 aa17.01■□□□□ 0.31
PDGFB-201ENST00000331163 BEND6Q5SZJ8 279 aaPredicted RBP17.01■□□□□ 0.31
PDGFB-201ENST00000331163 SLC39A4Q6P5W5 647 aa17.01■□□□□ 0.31
PDGFB-201ENST00000331163 CCDC50Q8IVM0 306 aa17.01■□□□□ 0.31
PDGFB-201ENST00000331163 ABI1Q8IZP0 508 aa17.01■□□□□ 0.31
PDGFB-201ENST00000331163 C16orf70Q9BSU1 422 aa17.01■□□□□ 0.31
PDGFB-201ENST00000331163 EIF2AQ9BY44 585 aaKnown RBP17.01■□□□□ 0.31
PDGFB-201ENST00000331163 POLIQ9UNA4 740 aa17.01■□□□□ 0.31
PDGFB-201ENST00000331163 CASTOR2A6NHX0 329 aa17.01■□□□□ 0.31
PDGFB-201ENST00000331163 LYPLA2O95372 231 aa17.01■□□□□ 0.31
PDGFB-201ENST00000331163 MUTP22033 750 aa17.01■□□□□ 0.31
PDGFB-201ENST00000331163 KCNJ6P48051 423 aa17.01■□□□□ 0.31
PDGFB-201ENST00000331163 EHBP1Q8NDI1 1231 aa17.01■□□□□ 0.31
PDGFB-201ENST00000331163 PLEKHO2Q8TD55 490 aa17.01■□□□□ 0.31
PDGFB-201ENST00000331163 PRMT7Q9NVM4 692 aaPredicted RBP17.01■□□□□ 0.31
PDGFB-201ENST00000331163 TLR3O15455 904 aaKnown RBP17.01■□□□□ 0.31
PDGFB-201ENST00000331163 LDHAP00338 332 aaKnown RBP17.01■□□□□ 0.31
PDGFB-201ENST00000331163 EDN1P05305 212 aa17.01■□□□□ 0.31
PDGFB-201ENST00000331163 EIF4BP23588 611 aaKnown RBP17.01■□□□□ 0.31
PDGFB-201ENST00000331163 DCUN1D2Q6PH85 259 aa17.01■□□□□ 0.31
PDGFB-201ENST00000331163 ZNF653Q96CK0 615 aa17.01■□□□□ 0.31
PDGFB-201ENST00000331163 CCDC51Q96ER9 411 aa17.01■□□□□ 0.31
PDGFB-201ENST00000331163 FIZ1Q96SL8 496 aa17.01■□□□□ 0.31
PDGFB-201ENST00000331163 TRIM31Q9BZY9 425 aa17.01■□□□□ 0.31
PDGFB-201ENST00000331163 CDT1Q9H211 546 aa17.01■□□□□ 0.31
PDGFB-201ENST00000331163 CDY2AQ9Y6F7 541 aa17.01■□□□□ 0.31
PDGFB-201ENST00000331163 UMODL1Q5DID0 1318 aa17■□□□□ 0.31
PDGFB-201ENST00000331163 LRRC10BA6NIK2 292 aa17■□□□□ 0.31
PDGFB-201ENST00000331163 LACTBL1A8MY62 500 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms