RNA–Protein interactions for RNA: ENST00000328020.10

CMTM1-201, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 981 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-201ENST00000328020 TIFAQ96CG3 184 aa15.27■□□□□ 0.04
CMTM1-201ENST00000328020 ANKRD36BP1Q96IX9 119 aa15.27■□□□□ 0.04
CMTM1-201ENST00000328020 MFSD14AQ96MC6 490 aa15.27■□□□□ 0.04
CMTM1-201ENST00000328020 ZNF558Q96NG5 402 aa15.27■□□□□ 0.04
CMTM1-201ENST00000328020 PPP1R10Q96QC0 940 aaKnown RBP15.27■□□□□ 0.04
CMTM1-201ENST00000328020 TGS1Q96RS0 853 aaKnown RBP15.27■□□□□ 0.04
CMTM1-201ENST00000328020 MAGEC2Q9UBF1 373 aaPredicted RBP15.27■□□□□ 0.04
CMTM1-201ENST00000328020 STK39Q9UEW8 545 aa15.27■□□□□ 0.04
CMTM1-201ENST00000328020 MYO9BQ13459 2157 aa15.26■□□□□ 0.03
CMTM1-201ENST00000328020 TMEM265A0A087WTH1 108 aa15.26■□□□□ 0.03
CMTM1-201ENST00000328020 PTGESO14684 152 aa15.26■□□□□ 0.03
CMTM1-201ENST00000328020 ZC3H11AO75152 810 aaKnown RBP eCLIP15.26■□□□□ 0.03
CMTM1-201ENST00000328020 AKAP3O75969 853 aa15.26■□□□□ 0.03
CMTM1-201ENST00000328020 TNNC2P02585 160 aa15.26■□□□□ 0.03
CMTM1-201ENST00000328020 TMEM191BP0C7N4 346 aa15.26■□□□□ 0.03
CMTM1-201ENST00000328020 TNNI1P19237 187 aa15.26■□□□□ 0.03
CMTM1-201ENST00000328020 DNAJB2P25686 324 aa15.26■□□□□ 0.03
CMTM1-201ENST00000328020 RPL9P32969 192 aaKnown RBP15.26■□□□□ 0.03
CMTM1-201ENST00000328020 DUOXA2Q1HG44 320 aa15.26■□□□□ 0.03
CMTM1-201ENST00000328020 CCDC40Q4G0X9 1142 aa15.26■□□□□ 0.03
CMTM1-201ENST00000328020 GLRA4Q5JXX5 417 aa15.26■□□□□ 0.03
CMTM1-201ENST00000328020 SPATA1Q5VX52 437 aa15.26■□□□□ 0.03
CMTM1-201ENST00000328020 FRMD5Q7Z6J6 570 aa15.26■□□□□ 0.03
CMTM1-201ENST00000328020 WDR49Q8IV35 697 aa15.26■□□□□ 0.03
CMTM1-201ENST00000328020 ZC3H3Q8IXZ2 948 aaKnown RBP15.26■□□□□ 0.03
CMTM1-201ENST00000328020 GSTCDQ8NEC7 633 aa15.26■□□□□ 0.03
CMTM1-201ENST00000328020 ENOX1Q8TC92 643 aaKnown RBP15.26■□□□□ 0.03
CMTM1-201ENST00000328020 TMC2Q8TDI7 906 aa15.26■□□□□ 0.03
CMTM1-201ENST00000328020 CLP1Q92989 425 aaKnown RBP15.26■□□□□ 0.03
CMTM1-201ENST00000328020 CCDC127Q96BQ5 260 aa15.26■□□□□ 0.03
CMTM1-201ENST00000328020 COLEC11Q9BWP8 271 aa15.26■□□□□ 0.03
CMTM1-201ENST00000328020 PLVAPQ9BX97 442 aa15.26■□□□□ 0.03
CMTM1-201ENST00000328020 SRRTQ9BXP5 876 aaKnown RBP15.26■□□□□ 0.03
CMTM1-201ENST00000328020 ARMCX3Q9UH62 379 aaPredicted RBP15.26■□□□□ 0.03
CMTM1-201ENST00000328020 MRPL42Q9Y6G3 142 aaKnown RBP15.26■□□□□ 0.03
CMTM1-201ENST00000328020 GBF1Q92538 1859 aa15.25■□□□□ 0.03
CMTM1-201ENST00000328020 LINC01553A4QN01 128 aa15.25■□□□□ 0.03
CMTM1-201ENST00000328020 SMTNL1A8MU46 457 aa15.25■□□□□ 0.03
CMTM1-201ENST00000328020 IKBKBO14920 756 aa15.25■□□□□ 0.03
CMTM1-201ENST00000328020 RB1P06400 928 aa15.25■□□□□ 0.03
CMTM1-201ENST00000328020 DLATP10515 647 aaKnown RBP15.25■□□□□ 0.03
CMTM1-201ENST00000328020 PAX3P23760 479 aa15.25■□□□□ 0.03
CMTM1-201ENST00000328020 OR1G1P47890 313 aa15.25■□□□□ 0.03
CMTM1-201ENST00000328020 CASP4P49662 377 aa15.25■□□□□ 0.03
CMTM1-201ENST00000328020 VAMP7P51809 220 aa15.25■□□□□ 0.03
CMTM1-201ENST00000328020 TFAMQ00059 246 aaKnown RBP15.25■□□□□ 0.03
CMTM1-201ENST00000328020 MYL5Q02045 173 aa15.25■□□□□ 0.03
CMTM1-201ENST00000328020 ANO6Q4KMQ2 910 aa15.25■□□□□ 0.03
CMTM1-201ENST00000328020 JADE1Q6IE81 842 aa15.25■□□□□ 0.03
CMTM1-201ENST00000328020 LRRC55Q6ZSA7 311 aa15.25■□□□□ 0.03
CMTM1-201ENST00000328020 DUSP9Q99956 384 aaKnown RBP15.25■□□□□ 0.03
CMTM1-201ENST00000328020 BPIFA3Q9BQP9 254 aa15.25■□□□□ 0.03
CMTM1-201ENST00000328020 DNAJC25Q9H1X3 360 aa15.25■□□□□ 0.03
CMTM1-201ENST00000328020 NKX2-4Q9H2Z4 354 aa15.25■□□□□ 0.03
CMTM1-201ENST00000328020 THAP9Q9H5L6 903 aa15.25■□□□□ 0.03
CMTM1-201ENST00000328020 PDE11AQ9HCR9 933 aa15.25■□□□□ 0.03
CMTM1-201ENST00000328020 FAN1Q9Y2M0 1017 aa15.25■□□□□ 0.03
CMTM1-201ENST00000328020 LCHNA4D1U4 455 aa15.24■□□□□ 0.03
CMTM1-201ENST00000328020 BECN2A8MW95 431 aa15.24■□□□□ 0.03
CMTM1-201ENST00000328020 MYOGP15173 224 aa15.24■□□□□ 0.03
CMTM1-201ENST00000328020 CTNNB1P35222 781 aa15.24■□□□□ 0.03
CMTM1-201ENST00000328020 PBX2P40425 430 aa15.24■□□□□ 0.03
CMTM1-201ENST00000328020 AFF1P51825 1210 aaKnown RBP15.24■□□□□ 0.03
CMTM1-201ENST00000328020 BCAR1P56945 870 aa15.24■□□□□ 0.03
CMTM1-201ENST00000328020 TPM4P67936 248 aa15.24■□□□□ 0.03
CMTM1-201ENST00000328020 KRT17Q04695 432 aa15.24■□□□□ 0.03
CMTM1-201ENST00000328020 DSC1Q08554 894 aa15.24■□□□□ 0.03
CMTM1-201ENST00000328020 BFSP1Q12934 665 aa15.24■□□□□ 0.03
CMTM1-201ENST00000328020 KCNT2Q6UVM3 1135 aa15.24■□□□□ 0.03
CMTM1-201ENST00000328020 ZNF280BQ86YH2 543 aa15.24■□□□□ 0.03
CMTM1-201ENST00000328020 COLGALT2Q8IYK4 626 aa15.24■□□□□ 0.03
CMTM1-201ENST00000328020 ZSWIM2Q8NEG5 633 aa15.24■□□□□ 0.03
CMTM1-201ENST00000328020 ANKRD20A12PQ8NF67 263 aa15.24■□□□□ 0.03
CMTM1-201ENST00000328020 PARD3BQ8TEW8 1205 aa15.24■□□□□ 0.03
CMTM1-201ENST00000328020 ZMAT2Q96NC0 199 aaKnown RBP15.24■□□□□ 0.03
CMTM1-201ENST00000328020 CGRRF1Q99675 332 aa15.24■□□□□ 0.03
CMTM1-201ENST00000328020 C11orf84Q9BUA3 381 aaPredicted RBP15.24■□□□□ 0.03
CMTM1-201ENST00000328020 GZF1Q9H116 711 aaPredicted RBP15.24■□□□□ 0.03
CMTM1-201ENST00000328020 CWH43Q9H720 699 aa15.24■□□□□ 0.03
CMTM1-201ENST00000328020 NRDE2Q9H7Z3 1164 aa15.24■□□□□ 0.03
CMTM1-201ENST00000328020 MIOSQ9NXC5 875 aa15.24■□□□□ 0.03
CMTM1-201ENST00000328020 SPG21Q9NZD8 308 aa15.24■□□□□ 0.03
CMTM1-201ENST00000328020 PUF60Q9UHX1 559 aaKnown RBP15.24■□□□□ 0.03
CMTM1-201ENST00000328020 ITGA11Q9UKX5 1188 aa15.24■□□□□ 0.03
CMTM1-201ENST00000328020 YBX2Q9Y2T7 364 aaKnown RBP15.24■□□□□ 0.03
CMTM1-201ENST00000328020 PDCD11Q14690 1871 aaKnown RBP15.24■□□□□ 0.03
CMTM1-201ENST00000328020 ANK1P16157 1881 aa15.23■□□□□ 0.03
CMTM1-201ENST00000328020 TRAPPC3O43617 180 aa15.23■□□□□ 0.03
CMTM1-201ENST00000328020 PHACTR2O75167 634 aa15.23■□□□□ 0.03
CMTM1-201ENST00000328020 DDHD2O94830 711 aa15.23■□□□□ 0.03
CMTM1-201ENST00000328020 GALTP07902 379 aa15.23■□□□□ 0.03
CMTM1-201ENST00000328020 TPM2P07951 284 aa15.23■□□□□ 0.03
CMTM1-201ENST00000328020 NFICP08651 508 aa15.23■□□□□ 0.03
CMTM1-201ENST00000328020 PRKCSHP14314 528 aaPredicted RBP15.23■□□□□ 0.03
CMTM1-201ENST00000328020 GTF2H1P32780 548 aa15.23■□□□□ 0.03
CMTM1-201ENST00000328020 BMPR1AP36894 532 aa15.23■□□□□ 0.03
CMTM1-201ENST00000328020 ZNF165P49910 485 aa15.23■□□□□ 0.03
CMTM1-201ENST00000328020 ERVK-21P61565 698 aa15.23■□□□□ 0.03
CMTM1-201ENST00000328020 TAP1Q03518 808 aa15.23■□□□□ 0.03
CMTM1-201ENST00000328020 SPAG1Q07617 926 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms