RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 MTMR12Q9C0I1 747 aa11.07□□□□□ -0.64
VIPAS39-201ENST00000327028 GANQ9H2C0 597 aa11.07□□□□□ -0.64
VIPAS39-201ENST00000327028 SIX2Q9NPC8 291 aa11.07□□□□□ -0.64
VIPAS39-201ENST00000327028 RGS18Q9NS28 235 aa11.07□□□□□ -0.64
VIPAS39-201ENST00000327028 DAAM1Q9Y4D1 1078 aa11.07□□□□□ -0.64
VIPAS39-201ENST00000327028 TRIP11Q15643 1979 aa11.07□□□□□ -0.64
VIPAS39-201ENST00000327028 A0A0U1RQF3 1178 aa11.07□□□□□ -0.64
VIPAS39-201ENST00000327028 KIAA0355O15063 1070 aa11.07□□□□□ -0.64
VIPAS39-201ENST00000327028 TNNC2P02585 160 aa11.07□□□□□ -0.64
VIPAS39-201ENST00000327028 ITGA4P13612 1032 aa11.07□□□□□ -0.64
VIPAS39-201ENST00000327028 SLC9A1P19634 815 aa11.07□□□□□ -0.64
VIPAS39-201ENST00000327028 AKAP5P24588 427 aa11.07□□□□□ -0.64
VIPAS39-201ENST00000327028 CYP2C18P33260 490 aa11.07□□□□□ -0.64
VIPAS39-201ENST00000327028 RFC2P35250 354 aa11.07□□□□□ -0.64
VIPAS39-201ENST00000327028 CCL23P55773 120 aa11.07□□□□□ -0.64
VIPAS39-201ENST00000327028 TMEM132DQ14C87 1099 aa11.07□□□□□ -0.64
VIPAS39-201ENST00000327028 XKR4Q5GH76 650 aa11.07□□□□□ -0.64
VIPAS39-201ENST00000327028 CCDC186Q7Z3E2 898 aa11.07□□□□□ -0.64
VIPAS39-201ENST00000327028 TAS1R2Q8TE23 839 aa11.07□□□□□ -0.64
VIPAS39-201ENST00000327028 LINC01599Q8WXQ3 324 aa11.07□□□□□ -0.64
VIPAS39-201ENST00000327028 SCLYQ96I15 445 aa11.07□□□□□ -0.64
VIPAS39-201ENST00000327028 EDEM3Q9BZQ6 932 aa11.07□□□□□ -0.64
VIPAS39-201ENST00000327028 RNF39Q9H2S5 420 aa11.07□□□□□ -0.64
VIPAS39-201ENST00000327028 C1orf112Q9NSG2 853 aa11.07□□□□□ -0.64
VIPAS39-201ENST00000327028 PARP2Q9UGN5 583 aa11.07□□□□□ -0.64
VIPAS39-201ENST00000327028 EPHB6O15197 1021 aa11.06□□□□□ -0.64
VIPAS39-201ENST00000327028 MFAP3LO75121 409 aa11.06□□□□□ -0.64
VIPAS39-201ENST00000327028 NOL4O94818 638 aa11.06□□□□□ -0.64
VIPAS39-201ENST00000327028 VNN1O95497 513 aa11.06□□□□□ -0.64
VIPAS39-201ENST00000327028 HLA-DRAP01903 254 aa11.06□□□□□ -0.64
VIPAS39-201ENST00000327028 ACTN1P12814 892 aa11.06□□□□□ -0.64
VIPAS39-201ENST00000327028 PIK3CAP42336 1068 aa11.06□□□□□ -0.64
VIPAS39-201ENST00000327028 TFAMQ00059 246 aaKnown RBP11.06□□□□□ -0.64
VIPAS39-201ENST00000327028 BIRC3Q13489 604 aa11.06□□□□□ -0.64
VIPAS39-201ENST00000327028 KLHDC7AQ5VTJ3 777 aa11.06□□□□□ -0.64
VIPAS39-201ENST00000327028 CNGA4Q8IV77 575 aa11.06□□□□□ -0.64
VIPAS39-201ENST00000327028 CACTINQ8WUQ7 758 aaKnown RBP11.06□□□□□ -0.64
VIPAS39-201ENST00000327028 TSPYL2Q9H2G4 693 aaPredicted RBP11.06□□□□□ -0.64
VIPAS39-201ENST00000327028 CEP72Q9P209 647 aa11.06□□□□□ -0.64
VIPAS39-201ENST00000327028 FBXL5Q9UKA1 691 aa11.06□□□□□ -0.64
VIPAS39-201ENST00000327028 CAPN11Q9UMQ6 739 aa11.06□□□□□ -0.64
VIPAS39-201ENST00000327028 AKR1B15C9JRZ8 316 aaPredicted RBP11.06□□□□□ -0.64
VIPAS39-201ENST00000327028 KCNE1P15382 129 aa11.06□□□□□ -0.64
VIPAS39-201ENST00000327028 ATF7P17544 494 aaPredicted RBP11.06□□□□□ -0.64
VIPAS39-201ENST00000327028 RFX1P22670 979 aa11.06□□□□□ -0.64
VIPAS39-201ENST00000327028 CASP14P31944 242 aa11.06□□□□□ -0.64
VIPAS39-201ENST00000327028 FXR1P51114 621 aaKnown RBP eCLIP11.06□□□□□ -0.64
VIPAS39-201ENST00000327028 TRAPPC11Q7Z392 1133 aa11.06□□□□□ -0.64
VIPAS39-201ENST00000327028 ECHDC2Q86YB7 292 aa11.06□□□□□ -0.64
VIPAS39-201ENST00000327028 DBF4BQ8NFT6 615 aa11.06□□□□□ -0.64
VIPAS39-201ENST00000327028 SEMA4DQ92854 862 aa11.06□□□□□ -0.64
VIPAS39-201ENST00000327028 PGBD4Q96DM1 585 aa11.06□□□□□ -0.64
VIPAS39-201ENST00000327028 KIF12Q96FN5 646 aa11.06□□□□□ -0.64
VIPAS39-201ENST00000327028 RAB20Q9NX57 234 aa11.06□□□□□ -0.64
VIPAS39-201ENST00000327028 APEX2Q9UBZ4 518 aa11.06□□□□□ -0.64
VIPAS39-201ENST00000327028 GIT1Q9Y2X7 761 aa11.06□□□□□ -0.64
VIPAS39-201ENST00000327028 C9IYK1 514 aa11.05□□□□□ -0.64
VIPAS39-201ENST00000327028 ZC3H11AO75152 810 aaKnown RBP eCLIP11.05□□□□□ -0.64
VIPAS39-201ENST00000327028 PHACTR2O75167 634 aa11.05□□□□□ -0.64
VIPAS39-201ENST00000327028 TIMP1P01033 207 aa11.05□□□□□ -0.64
VIPAS39-201ENST00000327028 APBA1Q02410 837 aa11.05□□□□□ -0.64
VIPAS39-201ENST00000327028 SLC24A5Q71RS6 500 aa11.05□□□□□ -0.64
VIPAS39-201ENST00000327028 ZNF598Q86UK7 904 aaKnown RBP11.05□□□□□ -0.64
VIPAS39-201ENST00000327028 RTN4RL1Q86UN2 441 aaPredicted RBP11.05□□□□□ -0.64
VIPAS39-201ENST00000327028 TC2NQ8N9U0 490 aa11.05□□□□□ -0.64
VIPAS39-201ENST00000327028 CPLX3Q8WVH0 158 aa11.05□□□□□ -0.64
VIPAS39-201ENST00000327028 UBN1Q9NPG3 1134 aa11.05□□□□□ -0.64
VIPAS39-201ENST00000327028 LUC7L2Q9Y383 392 aaKnown RBP11.05□□□□□ -0.64
VIPAS39-201ENST00000327028 TET1Q8NFU7 2136 aa11.05□□□□□ -0.64
VIPAS39-201ENST00000327028 TRIM43BA6NCK2 446 aa11.05□□□□□ -0.64
VIPAS39-201ENST00000327028 UCHL3P15374 230 aa11.05□□□□□ -0.64
VIPAS39-201ENST00000327028 POLR2FP61218 127 aaKnown RBP11.05□□□□□ -0.64
VIPAS39-201ENST00000327028 ZBED6P86452 979 aa11.05□□□□□ -0.64
VIPAS39-201ENST00000327028 NCOA4Q13772 614 aa11.05□□□□□ -0.64
VIPAS39-201ENST00000327028 ARID5BQ14865 1188 aa11.05□□□□□ -0.64
VIPAS39-201ENST00000327028 ZBTB6Q15916 424 aa11.05□□□□□ -0.64
VIPAS39-201ENST00000327028 C1orf127Q8N9H9 656 aa11.05□□□□□ -0.64
VIPAS39-201ENST00000327028 ZNF397Q8NF99 534 aaPredicted RBP11.05□□□□□ -0.64
VIPAS39-201ENST00000327028 TRIM43Q96BQ3 446 aaPredicted RBP11.05□□□□□ -0.64
VIPAS39-201ENST00000327028 ZMAT2Q96NC0 199 aaKnown RBP11.05□□□□□ -0.64
VIPAS39-201ENST00000327028 CXCL16Q9H2A7 254 aa11.05□□□□□ -0.64
VIPAS39-201ENST00000327028 PRDM5Q9NQX1 630 aaPredicted RBP11.05□□□□□ -0.64
VIPAS39-201ENST00000327028 KLK14Q9P0G3 267 aa11.05□□□□□ -0.64
VIPAS39-201ENST00000327028 ITGA11Q9UKX5 1188 aa11.05□□□□□ -0.64
VIPAS39-201ENST00000327028 MICAL3Q7RTP6 2002 aa11.05□□□□□ -0.64
VIPAS39-201ENST00000327028 LTBP2Q14767 1821 aa11.05□□□□□ -0.64
VIPAS39-201ENST00000327028 RNF225M0QZC1 329 aaPredicted RBP11.05□□□□□ -0.64
VIPAS39-201ENST00000327028 FAM189BP81408 668 aa11.05□□□□□ -0.64
VIPAS39-201ENST00000327028 GOLGA8FQ08AF8 430 aa11.05□□□□□ -0.64
VIPAS39-201ENST00000327028 GOLGA8DPQ0D2H9 430 aa11.05□□□□□ -0.64
VIPAS39-201ENST00000327028 TCTN1Q2MV58 587 aa11.05□□□□□ -0.64
VIPAS39-201ENST00000327028 IQCEQ6IPM2 695 aa11.05□□□□□ -0.64
VIPAS39-201ENST00000327028 AGMOQ6ZNB7 445 aa11.05□□□□□ -0.64
VIPAS39-201ENST00000327028 CACNA2D4Q7Z3S7 1137 aa11.05□□□□□ -0.64
VIPAS39-201ENST00000327028 BAP1Q92560 729 aa11.05□□□□□ -0.64
VIPAS39-201ENST00000327028 LPPQ93052 612 aa11.05□□□□□ -0.64
VIPAS39-201ENST00000327028 NT5C1BQ96P26 610 aa11.05□□□□□ -0.64
VIPAS39-201ENST00000327028 PANX2Q96RD6 677 aa11.05□□□□□ -0.64
VIPAS39-201ENST00000327028 DNAJC7Q99615 494 aa11.05□□□□□ -0.64
VIPAS39-201ENST00000327028 NAA15Q9BXJ9 866 aaKnown RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms