RNA–Protein interactions for RNA: ENST00000326956.11

SSBP3-201, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 2,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-201ENST00000326956 AHDC1Q5TGY3 1603 aaPredicted RBP15.56■□□□□ 0.08
SSBP3-201ENST00000326956 ADGRA3Q8IWK6 1321 aa15.56■□□□□ 0.08
SSBP3-201ENST00000326956 MAPK13O15264 365 aa15.56■□□□□ 0.08
SSBP3-201ENST00000326956 TCEA3O75764 348 aa15.56■□□□□ 0.08
SSBP3-201ENST00000326956 TBC1D10BQ4KMP7 808 aaPredicted RBP15.56■□□□□ 0.08
SSBP3-201ENST00000326956 ZFYVE27Q5T4F4 411 aa15.56■□□□□ 0.08
SSBP3-201ENST00000326956 KRT39Q6A163 491 aa15.56■□□□□ 0.08
SSBP3-201ENST00000326956 HAUS6Q7Z4H7 955 aa15.56■□□□□ 0.08
SSBP3-201ENST00000326956 ECHDC2Q86YB7 292 aa15.56■□□□□ 0.08
SSBP3-201ENST00000326956 ERP27Q96DN0 273 aa15.56■□□□□ 0.08
SSBP3-201ENST00000326956 LRRC37BQ96QE4 947 aa15.56■□□□□ 0.08
SSBP3-201ENST00000326956 LGALS13Q9UHV8 139 aa15.56■□□□□ 0.08
SSBP3-201ENST00000326956 NRAPQ86VF7 1730 aa15.56■□□□□ 0.08
SSBP3-201ENST00000326956 EXOC1LA0A1B0GW35 172 aa15.55■□□□□ 0.08
SSBP3-201ENST00000326956 TAC1P20366 129 aa15.55■□□□□ 0.08
SSBP3-201ENST00000326956 CDC25CP30307 473 aa15.55■□□□□ 0.08
SSBP3-201ENST00000326956 GJC1P36383 396 aa15.55■□□□□ 0.08
SSBP3-201ENST00000326956 IZUMO3Q5VZ72 239 aa15.55■□□□□ 0.08
SSBP3-201ENST00000326956 EP400NLQ6ZTU2 488 aa15.55■□□□□ 0.08
SSBP3-201ENST00000326956 PHLDB2Q86SQ0 1253 aa15.55■□□□□ 0.08
SSBP3-201ENST00000326956 C7orf43Q8WVR3 580 aa15.55■□□□□ 0.08
SSBP3-201ENST00000326956 IWS1Q96ST2 819 aa15.55■□□□□ 0.08
SSBP3-201ENST00000326956 STRA6Q9BX79 667 aa15.55■□□□□ 0.08
SSBP3-201ENST00000326956 SLC5A4Q9NY91 659 aa15.55■□□□□ 0.08
SSBP3-201ENST00000326956 ACTL7BQ9Y614 415 aa15.55■□□□□ 0.08
SSBP3-201ENST00000326956 SPAG7O75391 227 aa15.55■□□□□ 0.08
SSBP3-201ENST00000326956 CCNB1P14635 433 aa15.55■□□□□ 0.08
SSBP3-201ENST00000326956 KRT15P19012 456 aa15.55■□□□□ 0.08
SSBP3-201ENST00000326956 CCDC15Q0P6D6 951 aa15.55■□□□□ 0.08
SSBP3-201ENST00000326956 ACVR2BQ13705 512 aa15.55■□□□□ 0.08
SSBP3-201ENST00000326956 NGLY1Q96IV0 654 aa15.55■□□□□ 0.08
SSBP3-201ENST00000326956 FAM81BQ96LP2 452 aa15.55■□□□□ 0.08
SSBP3-201ENST00000326956 ZDHHC15Q96MV8 337 aa15.55■□□□□ 0.08
SSBP3-201ENST00000326956 LRRC4BQ9NT99 713 aa15.55■□□□□ 0.08
SSBP3-201ENST00000326956 MRPL11Q9Y3B7 192 aaKnown RBP15.55■□□□□ 0.08
SSBP3-201ENST00000326956 USH1CQ9Y6N9 552 aa15.55■□□□□ 0.08
SSBP3-201ENST00000326956 PLS3P13797 630 aa15.54■□□□□ 0.08
SSBP3-201ENST00000326956 ADRA2BP18089 450 aa15.54■□□□□ 0.08
SSBP3-201ENST00000326956 IVDP26440 423 aa15.54■□□□□ 0.08
SSBP3-201ENST00000326956 CETN2P41208 172 aa15.54■□□□□ 0.08
SSBP3-201ENST00000326956 CENPCQ03188 943 aa15.54■□□□□ 0.08
SSBP3-201ENST00000326956 DNAJC3Q13217 504 aa15.54■□□□□ 0.08
SSBP3-201ENST00000326956 TRIM68Q6AZZ1 485 aa15.54■□□□□ 0.08
SSBP3-201ENST00000326956 TATDN1Q6P1N9 297 aa15.54■□□□□ 0.08
SSBP3-201ENST00000326956 C12orf56Q8IXR9 622 aa15.54■□□□□ 0.08
SSBP3-201ENST00000326956 CFAP57Q96MR6 1250 aa15.54■□□□□ 0.08
SSBP3-201ENST00000326956 FAM167BQ9BTA0 163 aa15.54■□□□□ 0.08
SSBP3-201ENST00000326956 MYLK2Q9H1R3 596 aa15.54■□□□□ 0.08
SSBP3-201ENST00000326956 SPATA31A6Q5VVP1 1343 aa15.54■□□□□ 0.08
SSBP3-201ENST00000326956 TP73O15350 636 aa15.54■□□□□ 0.08
SSBP3-201ENST00000326956 SLC16A4O15374 487 aa15.54■□□□□ 0.08
SSBP3-201ENST00000326956 POTEJP0CG39 1038 aa15.54■□□□□ 0.08
SSBP3-201ENST00000326956 MAPTP10636 758 aaKnown RBP15.54■□□□□ 0.08
SSBP3-201ENST00000326956 GYS1P13807 737 aa15.54■□□□□ 0.08
SSBP3-201ENST00000326956 SLC1A1P43005 524 aa15.54■□□□□ 0.08
SSBP3-201ENST00000326956 RASSF2P50749 326 aa15.54■□□□□ 0.08
SSBP3-201ENST00000326956 POLGP54098 1239 aaPredicted RBP15.54■□□□□ 0.08
SSBP3-201ENST00000326956 NR1H3Q13133 447 aa15.54■□□□□ 0.08
SSBP3-201ENST00000326956 SPARCL1Q14515 664 aa15.54■□□□□ 0.08
SSBP3-201ENST00000326956 C1orf220Q5T0J3 134 aa15.54■□□□□ 0.08
SSBP3-201ENST00000326956 USP37Q86T82 979 aa15.54■□□□□ 0.08
SSBP3-201ENST00000326956 AGGF1Q8N302 714 aaeCLIP15.54■□□□□ 0.082e-6■□□□□ 9.7
SSBP3-201ENST00000326956 RIBC1Q8N443 379 aaPredicted RBP15.54■□□□□ 0.08
SSBP3-201ENST00000326956 ZSWIM2Q8NEG5 633 aa15.54■□□□□ 0.08
SSBP3-201ENST00000326956 ARMC2Q8NEN0 867 aa15.54■□□□□ 0.08
SSBP3-201ENST00000326956 CNKSR1Q969H4 720 aa15.54■□□□□ 0.08
SSBP3-201ENST00000326956 RBM15Q96T37 977 aaKnown RBP eCLIP15.54■□□□□ 0.08
SSBP3-201ENST00000326956 POC1B-GALNT4F8VUJ3 575 aa15.54■□□□□ 0.08
SSBP3-201ENST00000326956 DCTN3O75935 186 aa15.54■□□□□ 0.08
SSBP3-201ENST00000326956 P4HBP07237 508 aaKnown RBP15.54■□□□□ 0.08
SSBP3-201ENST00000326956 PEX19P40855 299 aa15.54■□□□□ 0.08
SSBP3-201ENST00000326956 PEX3P56589 373 aa15.54■□□□□ 0.08
SSBP3-201ENST00000326956 MGAT5Q09328 741 aa15.54■□□□□ 0.08
SSBP3-201ENST00000326956 SNRNP35Q16560 246 aaKnown RBP15.54■□□□□ 0.08
SSBP3-201ENST00000326956 FBXL13Q8NEE6 735 aa15.54■□□□□ 0.08
SSBP3-201ENST00000326956 PLEKHO2Q8TD55 490 aa15.54■□□□□ 0.08
SSBP3-201ENST00000326956 LRRC8CQ8TDW0 803 aa15.54■□□□□ 0.08
SSBP3-201ENST00000326956 SAAL1Q96ER3 474 aa15.54■□□□□ 0.08
SSBP3-201ENST00000326956 FAM118BQ9BPY3 351 aa15.54■□□□□ 0.08
SSBP3-201ENST00000326956 FAM198AQ9UFP1 575 aa15.54■□□□□ 0.08
SSBP3-201ENST00000326956 TCEAL9Q9UHQ7 104 aa15.54■□□□□ 0.08
SSBP3-201ENST00000326956 PHTF1Q9UMS5 762 aa15.54■□□□□ 0.08
SSBP3-201ENST00000326956 EXOC7Q9UPT5 735 aa15.54■□□□□ 0.08
SSBP3-201ENST00000326956 PPP1R12AO14974 1030 aaPredicted RBP15.53■□□□□ 0.08
SSBP3-201ENST00000326956 WFS1O76024 890 aa15.53■□□□□ 0.08
SSBP3-201ENST00000326956 RALAP11233 206 aa15.53■□□□□ 0.08
SSBP3-201ENST00000326956 CETPP11597 493 aa15.53■□□□□ 0.08
SSBP3-201ENST00000326956 RRM1P23921 792 aa15.53■□□□□ 0.08
SSBP3-201ENST00000326956 TARSP26639 723 aaKnown RBP15.53■□□□□ 0.08
SSBP3-201ENST00000326956 FOXN2P32314 431 aa15.53■□□□□ 0.08
SSBP3-201ENST00000326956 MAGEA4P43358 317 aa15.53■□□□□ 0.08
SSBP3-201ENST00000326956 CLEC16AQ2KHT3 1053 aa15.53■□□□□ 0.08
SSBP3-201ENST00000326956 CGB2Q6NT52 195 aa15.53■□□□□ 0.08
SSBP3-201ENST00000326956 CBWD2Q8IUF1 395 aa15.53■□□□□ 0.08
SSBP3-201ENST00000326956 SEMA4DQ92854 862 aa15.53■□□□□ 0.08
SSBP3-201ENST00000326956 SMC6Q96SB8 1091 aa15.53■□□□□ 0.08
SSBP3-201ENST00000326956 ARHGEF10LQ9HCE6 1279 aa15.53■□□□□ 0.08
SSBP3-201ENST00000326956 KCNQ5Q9NR82 932 aa15.53■□□□□ 0.08
SSBP3-201ENST00000326956 PCDHAC2Q9Y5I4 1007 aa15.53■□□□□ 0.08
SSBP3-201ENST00000326956 ADRB2P07550 413 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms