RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 R3HDM2Q9Y2K5 976 aaKnown RBP13.74□□□□□ -0.21
HMGCS1-201ENST00000325110 L3MBTL1Q9Y468 752 aa13.74□□□□□ -0.21
HMGCS1-201ENST00000325110 EXOC1LA0A1B0GW35 172 aa13.73□□□□□ -0.21
HMGCS1-201ENST00000325110 DRP2Q13474 957 aa13.73□□□□□ -0.21
HMGCS1-201ENST00000325110 BAATQ14032 418 aaPredicted RBP13.73□□□□□ -0.21
HMGCS1-201ENST00000325110 SCARA5Q6ZMJ2 495 aa13.73□□□□□ -0.21
HMGCS1-201ENST00000325110 TMEM143Q96AN5 459 aa13.73□□□□□ -0.21
HMGCS1-201ENST00000325110 ECT2Q9H8V3 914 aa13.73□□□□□ -0.21
HMGCS1-201ENST00000325110 TMEM8AQ9HCN3 771 aa13.73□□□□□ -0.21
HMGCS1-201ENST00000325110 KLHL14Q9P2G3 628 aa13.73□□□□□ -0.21
HMGCS1-201ENST00000325110 PCDHA3Q9Y5H8 950 aa13.73□□□□□ -0.21
HMGCS1-201ENST00000325110 ZBTB48P10074 688 aaPredicted RBP13.73□□□□□ -0.21
HMGCS1-201ENST00000325110 GZMAP12544 262 aa13.73□□□□□ -0.21
HMGCS1-201ENST00000325110 CAP2P40123 477 aa13.73□□□□□ -0.21
HMGCS1-201ENST00000325110 MMP13P45452 471 aa13.73□□□□□ -0.21
HMGCS1-201ENST00000325110 PEX5P50542 639 aa13.73□□□□□ -0.21
HMGCS1-201ENST00000325110 POLGP54098 1239 aaPredicted RBP13.73□□□□□ -0.21
HMGCS1-201ENST00000325110 NEDD9Q14511 834 aa13.73□□□□□ -0.21
HMGCS1-201ENST00000325110 ACAD10Q6JQN1 1059 aa13.73□□□□□ -0.21
HMGCS1-201ENST00000325110 C4orf33Q8N1A6 199 aa13.73□□□□□ -0.21
HMGCS1-201ENST00000325110 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.73□□□□□ -0.21
HMGCS1-201ENST00000325110 LBHD1Q9BQE6 289 aaPredicted RBP13.73□□□□□ -0.21
HMGCS1-201ENST00000325110 IMPG2Q9BZV3 1241 aa13.73□□□□□ -0.21
HMGCS1-201ENST00000325110 EPB41L4BQ9H329 900 aa13.73□□□□□ -0.21
HMGCS1-201ENST00000325110 PCYOX1Q9UHG3 505 aa13.73□□□□□ -0.21
HMGCS1-201ENST00000325110 TLR3O15455 904 aaKnown RBP13.73□□□□□ -0.21
HMGCS1-201ENST00000325110 ZBED4O75132 1171 aa13.73□□□□□ -0.21
HMGCS1-201ENST00000325110 MRPS9P82933 396 aaKnown RBP13.73□□□□□ -0.21
HMGCS1-201ENST00000325110 ATP13A4Q4VNC1 1196 aa13.73□□□□□ -0.21
HMGCS1-201ENST00000325110 SYCP2LQ5T4T6 812 aa13.73□□□□□ -0.21
HMGCS1-201ENST00000325110 SLC9A9Q8IVB4 645 aa13.73□□□□□ -0.21
HMGCS1-201ENST00000325110 SYTL5Q8TDW5 730 aaPredicted RBP13.73□□□□□ -0.21
HMGCS1-201ENST00000325110 GRK7Q8WTQ7 553 aa13.73□□□□□ -0.21
HMGCS1-201ENST00000325110 SHC3Q92529 594 aa13.73□□□□□ -0.21
HMGCS1-201ENST00000325110 TBC1D22BQ9NU19 505 aa13.73□□□□□ -0.21
HMGCS1-201ENST00000325110 NOCTQ9UK39 431 aaKnown RBP13.73□□□□□ -0.21
HMGCS1-201ENST00000325110 ASTN2O75129 1339 aaPredicted RBP13.72□□□□□ -0.21
HMGCS1-201ENST00000325110 KLRG2A4D1S0 409 aaPredicted RBP13.72□□□□□ -0.21
HMGCS1-201ENST00000325110 GGPS1O95749 300 aa13.72□□□□□ -0.21
HMGCS1-201ENST00000325110 ICAM1P05362 532 aa13.72□□□□□ -0.21
HMGCS1-201ENST00000325110 CD19P15391 556 aa13.72□□□□□ -0.21
HMGCS1-201ENST00000325110 SPP2Q13103 211 aa13.72□□□□□ -0.21
HMGCS1-201ENST00000325110 CNGA2Q16280 664 aa13.72□□□□□ -0.21
HMGCS1-201ENST00000325110 P3H1Q32P28 736 aa13.72□□□□□ -0.21
HMGCS1-201ENST00000325110 PRAMEF18Q5VWM3 479 aa13.72□□□□□ -0.21
HMGCS1-201ENST00000325110 FZD1Q9UP38 647 aa13.72□□□□□ -0.21
HMGCS1-201ENST00000325110 KRT1P04264 644 aa13.72□□□□□ -0.21
HMGCS1-201ENST00000325110 ADSSP30520 456 aa13.72□□□□□ -0.21
HMGCS1-201ENST00000325110 MTMR2Q13614 643 aa13.72□□□□□ -0.21
HMGCS1-201ENST00000325110 FAM182AQ5T1J6 154 aa13.72□□□□□ -0.21
HMGCS1-201ENST00000325110 ZNF449Q6P9G9 518 aa13.72□□□□□ -0.21
HMGCS1-201ENST00000325110 ZBTB33Q86T24 672 aa13.72□□□□□ -0.21
HMGCS1-201ENST00000325110 SPIRE2Q8WWL2 714 aa13.72□□□□□ -0.21
HMGCS1-201ENST00000325110 CCT6BQ92526 530 aa13.72□□□□□ -0.21
HMGCS1-201ENST00000325110 VTI1AQ96AJ9 217 aa13.72□□□□□ -0.21
HMGCS1-201ENST00000325110 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.72□□□□□ -0.21
HMGCS1-201ENST00000325110 AGTPBP1Q9UPW5 1226 aa13.72□□□□□ -0.21
HMGCS1-201ENST00000325110 USP15Q9Y4E8 981 aaPredicted RBP13.72□□□□□ -0.21
HMGCS1-201ENST00000325110 LRRD1A4D1F6 860 aa13.72□□□□□ -0.21
HMGCS1-201ENST00000325110 OSTNP61366 133 aa13.72□□□□□ -0.21
HMGCS1-201ENST00000325110 C1orf220Q5T0J3 134 aa13.72□□□□□ -0.21
HMGCS1-201ENST00000325110 GPD1LQ8N335 351 aa13.72□□□□□ -0.21
HMGCS1-201ENST00000325110 DEPTORQ8TB45 409 aa13.72□□□□□ -0.21
HMGCS1-201ENST00000325110 RBM15Q96T37 977 aaKnown RBP eCLIP13.72□□□□□ -0.212e-7■■■■□ 24.7
HMGCS1-201ENST00000325110 SYT11Q9BT88 431 aa13.72□□□□□ -0.21
HMGCS1-201ENST00000325110 NOD2Q9HC29 1040 aa13.72□□□□□ -0.21
HMGCS1-201ENST00000325110 RNF146Q9NTX7 359 aa13.72□□□□□ -0.21
HMGCS1-201ENST00000325110 CEP83Q9Y592 693 aa13.72□□□□□ -0.21
HMGCS1-201ENST00000325110 P4HA2O15460 535 aa13.71□□□□□ -0.21
HMGCS1-201ENST00000325110 HLA-DRAP01903 254 aa13.71□□□□□ -0.21
HMGCS1-201ENST00000325110 ZSCAN5DPP0CG00 497 aa13.71□□□□□ -0.21
HMGCS1-201ENST00000325110 GNA15P30679 374 aa13.71□□□□□ -0.21
HMGCS1-201ENST00000325110 KCNJ2P63252 427 aa13.71□□□□□ -0.21
HMGCS1-201ENST00000325110 KCNV2Q8TDN2 545 aa13.71□□□□□ -0.21
HMGCS1-201ENST00000325110 ATXN2LQ8WWM7 1075 aaKnown RBP13.71□□□□□ -0.21
HMGCS1-201ENST00000325110 BSNDQ8WZ55 320 aa13.71□□□□□ -0.21
HMGCS1-201ENST00000325110 SEC14L1Q92503 715 aa13.71□□□□□ -0.21
HMGCS1-201ENST00000325110 PRCCQ92733 491 aaPredicted RBP13.71□□□□□ -0.21
HMGCS1-201ENST00000325110 PITPNM3Q9BZ71 974 aa13.71□□□□□ -0.21
HMGCS1-201ENST00000325110 OSBPL8Q9BZF1 889 aa13.71□□□□□ -0.21
HMGCS1-201ENST00000325110 POLR3FQ9H1D9 316 aaPredicted RBP13.71□□□□□ -0.21
HMGCS1-201ENST00000325110 CXorf56Q9H5V9 222 aa13.71□□□□□ -0.21
HMGCS1-201ENST00000325110 SYNCQ9H7C4 482 aa13.71□□□□□ -0.21
HMGCS1-201ENST00000325110 TRIM33Q9UPN9 1127 aa13.71□□□□□ -0.21
HMGCS1-201ENST00000325110 SBF2Q86WG5 1849 aa13.71□□□□□ -0.21
HMGCS1-201ENST00000325110 SGK1O00141 431 aa13.71□□□□□ -0.21
HMGCS1-201ENST00000325110 IGF2BP3O00425 579 aaKnown RBP eCLIP13.71□□□□□ -0.21
HMGCS1-201ENST00000325110 RASSF9O75901 435 aa13.71□□□□□ -0.21
HMGCS1-201ENST00000325110 PSMC4P43686 418 aa13.71□□□□□ -0.21
HMGCS1-201ENST00000325110 DNAJC3Q13217 504 aa13.71□□□□□ -0.21
HMGCS1-201ENST00000325110 RSBN1LQ6PCB5 846 aaPredicted RBP13.71□□□□□ -0.21
HMGCS1-201ENST00000325110 TRMT10CQ7L0Y3 403 aaKnown RBP13.71□□□□□ -0.21
HMGCS1-201ENST00000325110 SPATA21Q7Z572 469 aa13.71□□□□□ -0.21
HMGCS1-201ENST00000325110 ANKMY2Q8IV38 441 aa13.71□□□□□ -0.21
HMGCS1-201ENST00000325110 PNMA3Q9UL41 463 aa13.71□□□□□ -0.21
HMGCS1-201ENST00000325110 CCNE2O96020 404 aa13.7□□□□□ -0.22
HMGCS1-201ENST00000325110 CA4P22748 312 aa13.7□□□□□ -0.22
HMGCS1-201ENST00000325110 GPS1Q13098 491 aa13.7□□□□□ -0.22
HMGCS1-201ENST00000325110 EEPD1Q7L9B9 569 aa13.7□□□□□ -0.22
HMGCS1-201ENST00000325110 TMEM161BQ8NDZ6 487 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms