RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 ZBED6P86452 979 aa13.78□□□□□ -0.2
DDX39A-202ENST00000324340 CETN1Q12798 172 aa13.78□□□□□ -0.2
DDX39A-202ENST00000324340 TUBB2AQ13885 445 aa13.78□□□□□ -0.2
DDX39A-202ENST00000324340 BRD3Q15059 726 aa13.78□□□□□ -0.2
DDX39A-202ENST00000324340 SEZ6Q53EL9 994 aa13.78□□□□□ -0.2
DDX39A-202ENST00000324340 KLHDC7AQ5VTJ3 777 aa13.78□□□□□ -0.2
DDX39A-202ENST00000324340 SLC27A1Q6PCB7 646 aa13.78□□□□□ -0.2
DDX39A-202ENST00000324340 SYT10Q6XYQ8 523 aa13.78□□□□□ -0.2
DDX39A-202ENST00000324340 CDR2LQ86X02 465 aaPredicted RBP13.78□□□□□ -0.2
DDX39A-202ENST00000324340 SUGP1Q8IWZ8 645 aaKnown RBP13.78□□□□□ -0.2
DDX39A-202ENST00000324340 ZNF516Q92618 1163 aa13.78□□□□□ -0.2
DDX39A-202ENST00000324340 FNBP1Q96RU3 617 aa13.78□□□□□ -0.2
DDX39A-202ENST00000324340 POP1Q99575 1024 aaKnown RBP13.78□□□□□ -0.2
DDX39A-202ENST00000324340 TUBB2BQ9BVA1 445 aa13.78□□□□□ -0.2
DDX39A-202ENST00000324340 LSM14BQ9BX40 385 aaKnown RBP13.78□□□□□ -0.2
DDX39A-202ENST00000324340 FAM107BQ9H098 131 aa13.78□□□□□ -0.2
DDX39A-202ENST00000324340 PDE11AQ9HCR9 933 aa13.78□□□□□ -0.2
DDX39A-202ENST00000324340 ABHD10Q9NUJ1 306 aa13.78□□□□□ -0.2
DDX39A-202ENST00000324340 CEP72Q9P209 647 aa13.78□□□□□ -0.2
DDX39A-202ENST00000324340 SQORQ9Y6N5 450 aa13.78□□□□□ -0.2
DDX39A-202ENST00000324340 IL18RAPO95256 599 aa13.77□□□□□ -0.21
DDX39A-202ENST00000324340 SGPL1O95470 568 aa13.77□□□□□ -0.21
DDX39A-202ENST00000324340 CLTAP09496 248 aa13.77□□□□□ -0.21
DDX39A-202ENST00000324340 DLATP10515 647 aaKnown RBP13.77□□□□□ -0.21
DDX39A-202ENST00000324340 HNRNPH3P31942 346 aaKnown RBP13.77□□□□□ -0.21
DDX39A-202ENST00000324340 KRT9P35527 623 aa13.77□□□□□ -0.21
DDX39A-202ENST00000324340 THPOP40225 353 aa13.77□□□□□ -0.21
DDX39A-202ENST00000324340 GRM5P41594 1212 aa13.77□□□□□ -0.21
DDX39A-202ENST00000324340 MNX1P50219 401 aaPredicted RBP13.77□□□□□ -0.21
DDX39A-202ENST00000324340 AP3M2P53677 418 aa13.77□□□□□ -0.21
DDX39A-202ENST00000324340 GOLGA8FQ08AF8 430 aa13.77□□□□□ -0.21
DDX39A-202ENST00000324340 GOLGA8DPQ0D2H9 430 aa13.77□□□□□ -0.21
DDX39A-202ENST00000324340 ENOX2Q16206 610 aaKnown RBP13.77□□□□□ -0.21
DDX39A-202ENST00000324340 ZACNQ401N2 412 aa13.77□□□□□ -0.21
DDX39A-202ENST00000324340 SWT1Q5T5J6 900 aaKnown RBP13.77□□□□□ -0.21
DDX39A-202ENST00000324340 SV2AQ7L0J3 742 aa13.77□□□□□ -0.21
DDX39A-202ENST00000324340 FAM228AQ86W67 206 aa13.77□□□□□ -0.21
DDX39A-202ENST00000324340 WDR49Q8IV35 697 aa13.77□□□□□ -0.21
DDX39A-202ENST00000324340 THNSL1Q8IYQ7 743 aa13.77□□□□□ -0.21
DDX39A-202ENST00000324340 CEP120Q8N960 986 aa13.77□□□□□ -0.21
DDX39A-202ENST00000324340 EHBP1Q8NDI1 1231 aa13.77□□□□□ -0.21
DDX39A-202ENST00000324340 MNS1Q8NEH6 495 aa13.77□□□□□ -0.21
DDX39A-202ENST00000324340 OR8K1Q8NGG5 319 aa13.77□□□□□ -0.21
DDX39A-202ENST00000324340 HNRNPLLQ8WVV9 542 aaKnown RBP13.77□□□□□ -0.21
DDX39A-202ENST00000324340 BAP1Q92560 729 aa13.77□□□□□ -0.21
DDX39A-202ENST00000324340 RABGGTAQ92696 567 aa13.77□□□□□ -0.21
DDX39A-202ENST00000324340 NAA15Q9BXJ9 866 aaKnown RBP13.77□□□□□ -0.21
DDX39A-202ENST00000324340 NOC2LQ9Y3T9 749 aaKnown RBP13.77□□□□□ -0.21
DDX39A-202ENST00000324340 RALGAPA2Q2PPJ7 1873 aa13.76□□□□□ -0.21
DDX39A-202ENST00000324340 MEFVO15553 781 aaPredicted RBP13.76□□□□□ -0.21
DDX39A-202ENST00000324340 CPP00450 1065 aa13.76□□□□□ -0.21
DDX39A-202ENST00000324340 C4BPAP04003 597 aaKnown RBP13.76□□□□□ -0.21
DDX39A-202ENST00000324340 STAG3L1P0CL83 205 aa13.76□□□□□ -0.21
DDX39A-202ENST00000324340 ACTN1P12814 892 aa13.76□□□□□ -0.21
DDX39A-202ENST00000324340 UCHL3P15374 230 aa13.76□□□□□ -0.21
DDX39A-202ENST00000324340 RFX1P22670 979 aa13.76□□□□□ -0.21
DDX39A-202ENST00000324340 SMC1AQ14683 1233 aaKnown RBP13.76□□□□□ -0.21
DDX39A-202ENST00000324340 MEA1Q16626 185 aa13.76□□□□□ -0.21
DDX39A-202ENST00000324340 E4F1Q66K89 784 aaPredicted RBP13.76□□□□□ -0.21
DDX39A-202ENST00000324340 LEKR1Q6ZMV7 388 aa13.76□□□□□ -0.21
DDX39A-202ENST00000324340 FAM126BQ8IXS8 530 aa13.76□□□□□ -0.21
DDX39A-202ENST00000324340 FBXL13Q8NEE6 735 aa13.76□□□□□ -0.21
DDX39A-202ENST00000324340 U2AF1L4Q8WU68 220 aaKnown RBP13.76□□□□□ -0.21
DDX39A-202ENST00000324340 PPM1EQ8WY54 764 aa13.76□□□□□ -0.21
DDX39A-202ENST00000324340 BAG1Q99933 345 aaPredicted RBP13.76□□□□□ -0.21
DDX39A-202ENST00000324340 INTS2Q9H0H0 1204 aaKnown RBP13.76□□□□□ -0.21
DDX39A-202ENST00000324340 TRPV6Q9H1D0 765 aa13.76□□□□□ -0.21
DDX39A-202ENST00000324340 NUCKS1Q9H1E3 243 aaKnown RBP13.76□□□□□ -0.21
DDX39A-202ENST00000324340 ASB7Q9H672 318 aa13.76□□□□□ -0.21
DDX39A-202ENST00000324340 RPF1Q9H9Y2 349 aaKnown RBP13.76□□□□□ -0.21
DDX39A-202ENST00000324340 ARFGAP3Q9NP61 516 aa13.76□□□□□ -0.21
DDX39A-202ENST00000324340 CHST12Q9NRB3 414 aa13.76□□□□□ -0.21
DDX39A-202ENST00000324340 TOPORSQ9NS56 1045 aaPredicted RBP13.76□□□□□ -0.21
DDX39A-202ENST00000324340 MYO6Q9UM54 1294 aa13.76□□□□□ -0.21
DDX39A-202ENST00000324340 NOD1Q9Y239 953 aa13.76□□□□□ -0.21
DDX39A-202ENST00000324340 RRP15Q9Y3B9 282 aaKnown RBP13.76□□□□□ -0.21
DDX39A-202ENST00000324340 PTPRJQ12913 1337 aa13.76□□□□□ -0.21
DDX39A-202ENST00000324340 ZSCAN12O43309 604 aa13.75□□□□□ -0.21
DDX39A-202ENST00000324340 ZC3H11AO75152 810 aaKnown RBP eCLIP13.75□□□□□ -0.21
DDX39A-202ENST00000324340 MYCP01106 439 aaPredicted RBP13.75□□□□□ -0.21
DDX39A-202ENST00000324340 CD4P01730 458 aa13.75□□□□□ -0.21
DDX39A-202ENST00000324340 CKBP12277 381 aa13.75□□□□□ -0.21
DDX39A-202ENST00000324340 TNNI1P19237 187 aa13.75□□□□□ -0.21
DDX39A-202ENST00000324340 OAS2P29728 719 aaKnown RBP13.75□□□□□ -0.21
DDX39A-202ENST00000324340 APBA1Q02410 837 aa13.75□□□□□ -0.21
DDX39A-202ENST00000324340 SLC10A6Q3KNW5 377 aa13.75□□□□□ -0.21
DDX39A-202ENST00000324340 FBXO47Q5MNV8 452 aa13.75□□□□□ -0.21
DDX39A-202ENST00000324340 UBXN11Q5T124 520 aa13.75□□□□□ -0.21
DDX39A-202ENST00000324340 C1orf53Q5VUE5 145 aa13.75□□□□□ -0.21
DDX39A-202ENST00000324340 CC2D1AQ6P1N0 951 aaPredicted RBP13.75□□□□□ -0.21
DDX39A-202ENST00000324340 TRAF7Q6Q0C0 670 aa13.75□□□□□ -0.21
DDX39A-202ENST00000324340 CD302Q8IX05 232 aa13.75□□□□□ -0.21
DDX39A-202ENST00000324340 TMEM192Q8IY95 271 aa13.75□□□□□ -0.21
DDX39A-202ENST00000324340 USP38Q8NB14 1042 aa13.75□□□□□ -0.21
DDX39A-202ENST00000324340 CAGE1Q8TC20 777 aa13.75□□□□□ -0.21
DDX39A-202ENST00000324340 SYN2Q92777 582 aaPredicted RBP13.75□□□□□ -0.21
DDX39A-202ENST00000324340 ERVK-5Q9HDB9 667 aa13.75□□□□□ -0.21
DDX39A-202ENST00000324340 ST7Q9NRC1 585 aa13.75□□□□□ -0.21
DDX39A-202ENST00000324340 APEX2Q9UBZ4 518 aa13.75□□□□□ -0.21
DDX39A-202ENST00000324340 ST3GAL5Q9UNP4 418 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms