RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 MAP1SQ66K74 1059 aaPredicted RBP8.12□□□□□ -1.11
IFT88-201ENST00000319980 EMBQ6PCB8 327 aa8.12□□□□□ -1.11
IFT88-201ENST00000319980 PLPPR4Q7Z2D5 763 aa8.12□□□□□ -1.11
IFT88-201ENST00000319980 ZNF653Q96CK0 615 aa8.12□□□□□ -1.11
IFT88-201ENST00000319980 BTBD6Q96KE9 485 aa8.12□□□□□ -1.11
IFT88-201ENST00000319980 CALR3Q96L12 384 aaKnown RBP8.12□□□□□ -1.11
IFT88-201ENST00000319980 RNPC3Q96LT9 517 aaKnown RBP8.12□□□□□ -1.11
IFT88-201ENST00000319980 NLRP4Q96MN2 994 aa8.12□□□□□ -1.11
IFT88-201ENST00000319980 NUP85Q9BW27 656 aa8.12□□□□□ -1.11
IFT88-201ENST00000319980 MRPL4Q9BYD3 311 aaKnown RBP8.12□□□□□ -1.11
IFT88-201ENST00000319980 NR2E1Q9Y466 385 aa8.12□□□□□ -1.11
IFT88-201ENST00000319980 GOLGA6BA6NDN3 693 aa8.12□□□□□ -1.11
IFT88-201ENST00000319980 LGR5O75473 907 aa8.12□□□□□ -1.11
IFT88-201ENST00000319980 TOM1L1O75674 476 aa8.12□□□□□ -1.11
IFT88-201ENST00000319980 SYF2O95926 243 aaKnown RBP8.12□□□□□ -1.11
IFT88-201ENST00000319980 FAM153BP0C7A2 387 aa8.12□□□□□ -1.11
IFT88-201ENST00000319980 COMTP21964 271 aa8.12□□□□□ -1.11
IFT88-201ENST00000319980 HADHBP55084 474 aaKnown RBP8.12□□□□□ -1.11
IFT88-201ENST00000319980 FAM153CQ494X1 144 aa8.12□□□□□ -1.11
IFT88-201ENST00000319980 SCARA3Q6AZY7 606 aa8.12□□□□□ -1.11
IFT88-201ENST00000319980 ZPBP2Q6X784 338 aa8.12□□□□□ -1.11
IFT88-201ENST00000319980 GPRC5AQ8NFJ5 357 aa8.12□□□□□ -1.11
IFT88-201ENST00000319980 TCP11Q8WWU5 503 aa8.12□□□□□ -1.11
IFT88-201ENST00000319980 KRT35Q92764 455 aa8.12□□□□□ -1.11
IFT88-201ENST00000319980 CARD9Q9H257 536 aa8.12□□□□□ -1.11
IFT88-201ENST00000319980 RNPEPQ9H4A4 650 aa8.12□□□□□ -1.11
IFT88-201ENST00000319980 APOBEC3GQ9HC16 384 aaKnown RBP8.12□□□□□ -1.11
IFT88-201ENST00000319980 MED4Q9NPJ6 270 aa8.12□□□□□ -1.11
IFT88-201ENST00000319980 FAM153AQ9UHL3 310 aa8.12□□□□□ -1.11
IFT88-201ENST00000319980 PCDHB2Q9Y5E7 798 aa8.12□□□□□ -1.11
IFT88-201ENST00000319980 PTPRFP10586 1907 aa8.12□□□□□ -1.11
IFT88-201ENST00000319980 MYH9P35579 1960 aaKnown RBP8.12□□□□□ -1.11
IFT88-201ENST00000319980 CNTNAP2Q9UHC6 1331 aa8.12□□□□□ -1.11
IFT88-201ENST00000319980 CCDC188H7C350 402 aa8.11□□□□□ -1.11
IFT88-201ENST00000319980 INO80B-WBP1J3KQ70 363 aa8.11□□□□□ -1.11
IFT88-201ENST00000319980 TNFRSF8P28908 595 aa8.11□□□□□ -1.11
IFT88-201ENST00000319980 MARCKSL1P49006 195 aa8.11□□□□□ -1.11
IFT88-201ENST00000319980 GUCY2FP51841 1108 aa8.11□□□□□ -1.11
IFT88-201ENST00000319980 IGBP1P78318 339 aa8.11□□□□□ -1.11
IFT88-201ENST00000319980 HLTFQ14527 1009 aaKnown RBP eCLIP8.11□□□□□ -1.11
IFT88-201ENST00000319980 C2CD6Q53TS8 623 aa8.11□□□□□ -1.11
IFT88-201ENST00000319980 ACAD10Q6JQN1 1059 aa8.11□□□□□ -1.11
IFT88-201ENST00000319980 AADACL2Q6P093 401 aa8.11□□□□□ -1.11
IFT88-201ENST00000319980 TMEM270Q6UE05 265 aa8.11□□□□□ -1.11
IFT88-201ENST00000319980 ARMCX2Q7L311 632 aa8.11□□□□□ -1.11
IFT88-201ENST00000319980 CDR2LQ86X02 465 aaPredicted RBP8.11□□□□□ -1.11
IFT88-201ENST00000319980 ZBTB8OSQ8IWT0 167 aa8.11□□□□□ -1.11
IFT88-201ENST00000319980 ZNF564Q8TBZ8 553 aaPredicted RBP8.11□□□□□ -1.11
IFT88-201ENST00000319980 FAM71BQ8TC56 605 aa8.11□□□□□ -1.11
IFT88-201ENST00000319980 CASKIN2Q8WXE0 1202 aa8.11□□□□□ -1.11
IFT88-201ENST00000319980 CPA5Q8WXQ8 436 aa8.11□□□□□ -1.11
IFT88-201ENST00000319980 FAM81BQ96LP2 452 aa8.11□□□□□ -1.11
IFT88-201ENST00000319980 INO80BQ9C086 356 aaPredicted RBP8.11□□□□□ -1.11
IFT88-201ENST00000319980 SMARCAD1Q9H4L7 1026 aa8.11□□□□□ -1.11
IFT88-201ENST00000319980 GTF3C4Q9UKN8 822 aa8.11□□□□□ -1.11
IFT88-201ENST00000319980 PNMA3Q9UL41 463 aa8.11□□□□□ -1.11
IFT88-201ENST00000319980 IGKV6-21A0A0C4DH24 114 aa8.11□□□□□ -1.11
IFT88-201ENST00000319980 IQCA1LA6NCM1 817 aa8.11□□□□□ -1.11
IFT88-201ENST00000319980 ASB14A6NK59 587 aa8.11□□□□□ -1.11
IFT88-201ENST00000319980 AGPSO00116 658 aa8.11□□□□□ -1.11
IFT88-201ENST00000319980 PDHXO00330 501 aa8.11□□□□□ -1.11
IFT88-201ENST00000319980 RNF40O75150 1001 aa8.11□□□□□ -1.11
IFT88-201ENST00000319980 CST3P01034 146 aaPredicted RBP8.11□□□□□ -1.11
IFT88-201ENST00000319980 PRKCBP05771 671 aa8.11□□□□□ -1.11
IFT88-201ENST00000319980 ADORA2AP29274 412 aa8.11□□□□□ -1.11
IFT88-201ENST00000319980 SSTR3P32745 418 aaPredicted RBP8.11□□□□□ -1.11
IFT88-201ENST00000319980 AARSP49588 968 aaKnown RBP eCLIP8.11□□□□□ -1.11
IFT88-201ENST00000319980 CLCN3P51790 818 aa8.11□□□□□ -1.11
IFT88-201ENST00000319980 OSTNP61366 133 aa8.11□□□□□ -1.11
IFT88-201ENST00000319980 NOP14P78316 857 aaKnown RBP8.11□□□□□ -1.11
IFT88-201ENST00000319980 PAK2Q13177 524 aa8.11□□□□□ -1.11
IFT88-201ENST00000319980 CUL2Q13617 745 aa8.11□□□□□ -1.11
IFT88-201ENST00000319980 NCOA4Q13772 614 aa8.11□□□□□ -1.11
IFT88-201ENST00000319980 C11orf63Q6NUN7 778 aa8.11□□□□□ -1.11
IFT88-201ENST00000319980 EFCAB12Q6NXP0 572 aa8.11□□□□□ -1.11
IFT88-201ENST00000319980 PHLDB2Q86SQ0 1253 aa8.11□□□□□ -1.11
IFT88-201ENST00000319980 CPNE8Q86YQ8 564 aa8.11□□□□□ -1.11
IFT88-201ENST00000319980 UBL4BQ8N7F7 174 aa8.11□□□□□ -1.11
IFT88-201ENST00000319980 CGRRF1Q99675 332 aa8.11□□□□□ -1.11
IFT88-201ENST00000319980 ACO2Q99798 780 aaKnown RBP8.11□□□□□ -1.11
IFT88-201ENST00000319980 CCDC113Q9H0I3 377 aa8.11□□□□□ -1.11
IFT88-201ENST00000319980 CNOT8Q9UFF9 292 aaKnown RBP8.11□□□□□ -1.11
IFT88-201ENST00000319980 NUB1Q9Y5A7 615 aa8.11□□□□□ -1.11
IFT88-201ENST00000319980 OTOFQ9HC10 1997 aa8.11□□□□□ -1.11
IFT88-201ENST00000319980 UMODL1Q5DID0 1318 aa8.11□□□□□ -1.11
IFT88-201ENST00000319980 MIF4GDA9UHW6 222 aaKnown RBP8.11□□□□□ -1.11
IFT88-201ENST00000319980 SPOPO43791 374 aa8.11□□□□□ -1.11
IFT88-201ENST00000319980 GAS2O43903 313 aaKnown RBP8.11□□□□□ -1.11
IFT88-201ENST00000319980 CSDE1O75534 798 aaKnown RBP8.11□□□□□ -1.11
IFT88-201ENST00000319980 CYP1A2P05177 515 aa8.11□□□□□ -1.11
IFT88-201ENST00000319980 SLC26A2P50443 739 aa8.11□□□□□ -1.11
IFT88-201ENST00000319980 IRF5Q13568 498 aa8.11□□□□□ -1.11
IFT88-201ENST00000319980 TCEAL1Q15170 157 aa8.11□□□□□ -1.11
IFT88-201ENST00000319980 CLEC16AQ2KHT3 1053 aa8.11□□□□□ -1.11
IFT88-201ENST00000319980 PNMA8AQ86V59 439 aaPredicted RBP8.11□□□□□ -1.11
IFT88-201ENST00000319980 DDX42Q86XP3 938 aaKnown RBP eCLIP8.11□□□□□ -1.11
IFT88-201ENST00000319980 EXOC8Q8IYI6 725 aa8.11□□□□□ -1.11
IFT88-201ENST00000319980 THNSL1Q8IYQ7 743 aa8.11□□□□□ -1.11
IFT88-201ENST00000319980 TSEN2Q8NCE0 465 aaKnown RBP8.11□□□□□ -1.11
IFT88-201ENST00000319980 CELF4Q9BZC1 486 aaKnown RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms