RNA–Protein interactions for RNA: ENST00000319420.3

SHISA2-201, Transcript of shisa family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA2, Length 2,860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA2-201ENST00000319420 ZBTB48P10074 688 aaPredicted RBP17.1■□□□□ 0.33
SHISA2-201ENST00000319420 RFX1P22670 979 aa17.1■□□□□ 0.33
SHISA2-201ENST00000319420 ORC1Q13415 861 aa17.1■□□□□ 0.33
SHISA2-201ENST00000319420 ZACNQ401N2 412 aa17.1■□□□□ 0.33
SHISA2-201ENST00000319420 CPB2Q96IY4 423 aa17.1■□□□□ 0.33
SHISA2-201ENST00000319420 NUP85Q9BW27 656 aa17.1■□□□□ 0.33
SHISA2-201ENST00000319420 CELF4Q9BZC1 486 aaKnown RBP17.1■□□□□ 0.33
SHISA2-201ENST00000319420 NUB1Q9Y5A7 615 aa17.1■□□□□ 0.33
SHISA2-201ENST00000319420 GJB6O95452 261 aa17.1■□□□□ 0.33
SHISA2-201ENST00000319420 CETPP11597 493 aa17.1■□□□□ 0.33
SHISA2-201ENST00000319420 GGCXP38435 758 aa17.1■□□□□ 0.33
SHISA2-201ENST00000319420 GPC5P78333 572 aa17.1■□□□□ 0.33
SHISA2-201ENST00000319420 CCNA1P78396 465 aa17.1■□□□□ 0.33
SHISA2-201ENST00000319420 NCOA4Q13772 614 aa17.1■□□□□ 0.33
SHISA2-201ENST00000319420 HLTFQ14527 1009 aaKnown RBP eCLIP17.1■□□□□ 0.33
SHISA2-201ENST00000319420 PSMD6Q15008 389 aa17.1■□□□□ 0.33
SHISA2-201ENST00000319420 ALG3Q92685 438 aa17.1■□□□□ 0.33
SHISA2-201ENST00000319420 PTPN18Q99952 460 aa17.1■□□□□ 0.33
SHISA2-201ENST00000319420 MRPL4Q9BYD3 311 aaKnown RBP17.1■□□□□ 0.33
SHISA2-201ENST00000319420 SMARCAD1Q9H4L7 1026 aa17.1■□□□□ 0.33
SHISA2-201ENST00000319420 NXF1Q9UBU9 619 aaKnown RBP17.1■□□□□ 0.33
SHISA2-201ENST00000319420 AMACRQ9UHK6 382 aa17.1■□□□□ 0.33
SHISA2-201ENST00000319420 COQ4Q9Y3A0 265 aa17.1■□□□□ 0.33
SHISA2-201ENST00000319420 C4BPAP04003 597 aaKnown RBP17.09■□□□□ 0.33
SHISA2-201ENST00000319420 WEE2P0C1S8 567 aa17.09■□□□□ 0.33
SHISA2-201ENST00000319420 GJC1P36383 396 aa17.09■□□□□ 0.33
SHISA2-201ENST00000319420 NOP14P78316 857 aaKnown RBP17.09■□□□□ 0.33
SHISA2-201ENST00000319420 SLFN12LQ6IEE8 588 aa17.09■□□□□ 0.33
SHISA2-201ENST00000319420 FAM167AQ96KS9 214 aa17.09■□□□□ 0.33
SHISA2-201ENST00000319420 A0A087WZ62 844 aa17.09■□□□□ 0.33
SHISA2-201ENST00000319420 SPOPO43791 374 aa17.09■□□□□ 0.33
SHISA2-201ENST00000319420 LGALS2P05162 132 aa17.09■□□□□ 0.33
SHISA2-201ENST00000319420 FAM153BP0C7A2 387 aa17.09■□□□□ 0.33
SHISA2-201ENST00000319420 GPS2Q13227 327 aa17.09■□□□□ 0.33
SHISA2-201ENST00000319420 FAM153CQ494X1 144 aa17.09■□□□□ 0.33
SHISA2-201ENST00000319420 DCAF12L1Q5VU92 463 aa17.09■□□□□ 0.33
SHISA2-201ENST00000319420 IER5Q5VY09 327 aa17.09■□□□□ 0.33
SHISA2-201ENST00000319420 SYCE1Q8N0S2 351 aa17.09■□□□□ 0.33
SHISA2-201ENST00000319420 MSL3Q8N5Y2 521 aaKnown RBP17.09■□□□□ 0.33
SHISA2-201ENST00000319420 TSEN2Q8NCE0 465 aaKnown RBP17.09■□□□□ 0.33
SHISA2-201ENST00000319420 AFAP1L1Q8TED9 768 aa17.09■□□□□ 0.33
SHISA2-201ENST00000319420 CYFIP2Q96F07 1278 aa17.09■□□□□ 0.33
SHISA2-201ENST00000319420 FDXACB1Q9BRP7 624 aaPredicted RBP17.09■□□□□ 0.33
SHISA2-201ENST00000319420 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.09■□□□□ 0.33
SHISA2-201ENST00000319420 FAM153AQ9UHL3 310 aa17.09■□□□□ 0.33
SHISA2-201ENST00000319420 STXBP5LQ9Y2K9 1186 aa17.09■□□□□ 0.33
SHISA2-201ENST00000319420 ASB14A6NK59 587 aa17.08■□□□□ 0.33
SHISA2-201ENST00000319420 PGRMC1O00264 195 aaKnown RBP17.08■□□□□ 0.33
SHISA2-201ENST00000319420 COMTP21964 271 aa17.08■□□□□ 0.33
SHISA2-201ENST00000319420 CDR1P51861 262 aa17.08■□□□□ 0.33
SHISA2-201ENST00000319420 MYL6P60660 151 aa17.08■□□□□ 0.33
SHISA2-201ENST00000319420 CDR2Q01850 454 aa17.08■□□□□ 0.33
SHISA2-201ENST00000319420 FAM49AQ9H0Q0 323 aaPredicted RBP17.08■□□□□ 0.33
SHISA2-201ENST00000319420 ERAP1Q9NZ08 941 aa17.08■□□□□ 0.33
SHISA2-201ENST00000319420 RTN2O75298 545 aa17.08■□□□□ 0.32
SHISA2-201ENST00000319420 TOM1L1O75674 476 aa17.08■□□□□ 0.32
SHISA2-201ENST00000319420 SSR1P43307 286 aaKnown RBP17.08■□□□□ 0.32
SHISA2-201ENST00000319420 ARHGAP1Q07960 439 aa17.08■□□□□ 0.32
SHISA2-201ENST00000319420 DPH6Q7L8W6 267 aa17.08■□□□□ 0.32
SHISA2-201ENST00000319420 GPR142Q7Z601 462 aa17.08■□□□□ 0.32
SHISA2-201ENST00000319420 SLFN11Q7Z7L1 901 aa17.08■□□□□ 0.32
SHISA2-201ENST00000319420 CNOT8Q9UFF9 292 aaKnown RBP17.08■□□□□ 0.32
SHISA2-201ENST00000319420 EVPLQ92817 2033 aa17.08■□□□□ 0.32
SHISA2-201ENST00000319420 CXCL8P10145 99 aa17.07■□□□□ 0.32
SHISA2-201ENST00000319420 TAPT1Q6NXT6 567 aa17.07■□□□□ 0.32
SHISA2-201ENST00000319420 ZNF564Q8TBZ8 553 aaPredicted RBP17.07■□□□□ 0.32
SHISA2-201ENST00000319420 ACO2Q99798 780 aaKnown RBP17.07■□□□□ 0.32
SHISA2-201ENST00000319420 C11orf70Q9BRQ4 267 aa17.07■□□□□ 0.32
SHISA2-201ENST00000319420 KIAA1586Q9HCI6 787 aa17.07■□□□□ 0.32
SHISA2-201ENST00000319420 RNF14Q9UBS8 474 aa17.07■□□□□ 0.32
SHISA2-201ENST00000319420 GTF2A2P52657 109 aa17.07■□□□□ 0.32
SHISA2-201ENST00000319420 HSP90B2PQ58FF3 399 aa17.07■□□□□ 0.32
SHISA2-201ENST00000319420 ATF7IP2Q5U623 682 aa17.07■□□□□ 0.32
SHISA2-201ENST00000319420 C2orf69Q8N8R5 385 aa17.07■□□□□ 0.32
SHISA2-201ENST00000319420 NLRP7Q8WX94 980 aa17.07■□□□□ 0.32
SHISA2-201ENST00000319420 RNPC3Q96LT9 517 aaKnown RBP17.07■□□□□ 0.32
SHISA2-201ENST00000319420 DPH5Q9H2P9 285 aa17.07■□□□□ 0.32
SHISA2-201ENST00000319420 VIPAS39Q9H9C1 493 aa17.07■□□□□ 0.32
SHISA2-201ENST00000319420 SART1O43290 800 aaKnown RBP17.07■□□□□ 0.32
SHISA2-201ENST00000319420 THAP12O43422 761 aa17.07■□□□□ 0.32
SHISA2-201ENST00000319420 RNF40O75150 1001 aa17.07■□□□□ 0.32
SHISA2-201ENST00000319420 ANXA13P27216 316 aa17.07■□□□□ 0.32
SHISA2-201ENST00000319420 LMAN1P49257 510 aa17.07■□□□□ 0.32
SHISA2-201ENST00000319420 CUL2Q13617 745 aa17.07■□□□□ 0.32
SHISA2-201ENST00000319420 MXD4Q14582 209 aaPredicted RBP17.07■□□□□ 0.32
SHISA2-201ENST00000319420 SKIDA1Q1XH10 827 aa17.07■□□□□ 0.32
SHISA2-201ENST00000319420 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.07■□□□□ 0.32
SHISA2-201ENST00000319420 IMPG2Q9BZV3 1241 aa17.07■□□□□ 0.32
SHISA2-201ENST00000319420 ISCUQ9H1K1 167 aa17.07■□□□□ 0.32
SHISA2-201ENST00000319420 TMEM59LQ9UK28 342 aa17.07■□□□□ 0.32
SHISA2-201ENST00000319420 INTUQ9ULD6 942 aa17.07■□□□□ 0.32
SHISA2-201ENST00000319420 HTTP42858 3142 aa17.06■□□□□ 0.32
SHISA2-201ENST00000319420 CNTNAP2Q9UHC6 1331 aa17.06■□□□□ 0.32
SHISA2-201ENST00000319420 A0A0A6YYK5 440 aaPredicted RBP17.06■□□□□ 0.32
SHISA2-201ENST00000319420 SNAI1O95863 264 aaPredicted RBP17.06■□□□□ 0.32
SHISA2-201ENST00000319420 RRM1P23921 792 aa17.06■□□□□ 0.32
SHISA2-201ENST00000319420 HUNKP57058 714 aa17.06■□□□□ 0.32
SHISA2-201ENST00000319420 TRPC3Q13507 836 aa17.06■□□□□ 0.32
SHISA2-201ENST00000319420 KCNV1Q6PIU1 500 aa17.06■□□□□ 0.32
SHISA2-201ENST00000319420 FMNL3Q8IVF7 1028 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms