RNA–Protein interactions for RNA: ENST00000318607.9

PABPC1-201, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC1, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-201ENST00000318607 TTC4O95801 387 aa15.1■□□□□ 0.01
PABPC1-201ENST00000318607 KRT4P19013 534 aa15.1■□□□□ 0.01
PABPC1-201ENST00000318607 WDR4P57081 412 aaKnown RBP15.1■□□□□ 0.01
PABPC1-201ENST00000318607 IRX1P78414 480 aaPredicted RBP15.1■□□□□ 0.01
PABPC1-201ENST00000318607 BBS9Q3SYG4 887 aa15.1■□□□□ 0.01
PABPC1-201ENST00000318607 CERKLQ49MI3 558 aaPredicted RBP15.1■□□□□ 0.01
PABPC1-201ENST00000318607 SEZ6Q53EL9 994 aa15.1■□□□□ 0.01
PABPC1-201ENST00000318607 SLFN11Q7Z7L1 901 aa15.1■□□□□ 0.01
PABPC1-201ENST00000318607 PRR11Q96HE9 360 aaPredicted RBP15.1■□□□□ 0.01
PABPC1-201ENST00000318607 CHKBQ9Y259 395 aa15.1■□□□□ 0.01
PABPC1-201ENST00000318607 NUP188Q5SRE5 1749 aa15.1■□□□□ 0.01
PABPC1-201ENST00000318607 COL4A1P02462 1669 aa15.1■□□□□ 0.01
PABPC1-201ENST00000318607 MAPK13O15264 365 aa15.1■□□□□ 0.01
PABPC1-201ENST00000318607 SMNDC1O75940 238 aaKnown RBP eCLIP15.1■□□□□ 0.018e-8■■■■■ 27.3
PABPC1-201ENST00000318607 RPA1P27694 616 aa15.1■□□□□ 0.01
PABPC1-201ENST00000318607 VAMP7P51809 220 aa15.1■□□□□ 0.01
PABPC1-201ENST00000318607 NPEPPSP55786 919 aa15.1■□□□□ 0.01
PABPC1-201ENST00000318607 SLC8A3P57103 927 aa15.1■□□□□ 0.01
PABPC1-201ENST00000318607 CDR2Q01850 454 aa15.1■□□□□ 0.01
PABPC1-201ENST00000318607 KPNB1Q14974 876 aaKnown RBP15.1■□□□□ 0.01
PABPC1-201ENST00000318607 SPOPLQ6IQ16 392 aa15.1■□□□□ 0.01
PABPC1-201ENST00000318607 PPP4R3CPQ6ZMV5 832 aa15.1■□□□□ 0.01
PABPC1-201ENST00000318607 RHOT2Q8IXI1 618 aa15.1■□□□□ 0.01
PABPC1-201ENST00000318607 CCDC33Q8N5R6 958 aa15.1■□□□□ 0.01
PABPC1-201ENST00000318607 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.1■□□□□ 0.012e-6■■■■■ 54.4
PABPC1-201ENST00000318607 FHDC1Q9C0D6 1143 aaPredicted RBP15.1■□□□□ 0.01
PABPC1-201ENST00000318607 F5H6K3 240 aa15.09■□□□□ 0.01
PABPC1-201ENST00000318607 MYCLP12524 364 aaPredicted RBP15.09■□□□□ 0.01
PABPC1-201ENST00000318607 TAC1P20366 129 aa15.09■□□□□ 0.01
PABPC1-201ENST00000318607 ADRA1DP25100 572 aa15.09■□□□□ 0.01
PABPC1-201ENST00000318607 PRKCIP41743 596 aa15.09■□□□□ 0.01
PABPC1-201ENST00000318607 ARHGEF1Q92888 912 aaKnown RBP15.09■□□□□ 0.01
PABPC1-201ENST00000318607 CLPTM1LQ96KA5 538 aa15.09■□□□□ 0.01
PABPC1-201ENST00000318607 FAM161BQ96MY7 647 aa15.09■□□□□ 0.01
PABPC1-201ENST00000318607 ZC3H12CQ9C0D7 883 aaKnown RBP15.09■□□□□ 0.01
PABPC1-201ENST00000318607 TXLNGQ9NUQ3 528 aa15.09■□□□□ 0.01
PABPC1-201ENST00000318607 CCNL1Q9UK58 526 aaPredicted RBP15.09■□□□□ 0.01
PABPC1-201ENST00000318607 PACSIN3Q9UKS6 424 aa15.09■□□□□ 0.01
PABPC1-201ENST00000318607 TRAF3IP3Q9Y228 551 aa15.09■□□□□ 0.01
PABPC1-201ENST00000318607 RAD17O75943 681 aa15.09■□□□□ 0.01
PABPC1-201ENST00000318607 UNC5CO95185 931 aa15.09■□□□□ 0.01
PABPC1-201ENST00000318607 SSTR1P30872 391 aa15.09■□□□□ 0.01
PABPC1-201ENST00000318607 GAD2Q05329 585 aa15.09■□□□□ 0.01
PABPC1-201ENST00000318607 PDIA2Q13087 525 aaKnown RBP15.09■□□□□ 0.01
PABPC1-201ENST00000318607 USP4Q13107 963 aa15.09■□□□□ 0.01
PABPC1-201ENST00000318607 SMTNL2Q2TAL5 461 aa15.09■□□□□ 0.01
PABPC1-201ENST00000318607 ANO7Q6IWH7 933 aa15.09■□□□□ 0.01
PABPC1-201ENST00000318607 TTC7BQ86TV6 843 aa15.09■□□□□ 0.01
PABPC1-201ENST00000318607 LRRC6Q86X45 466 aa15.09■□□□□ 0.01
PABPC1-201ENST00000318607 CCHCR1Q8TD31 782 aa15.09■□□□□ 0.01
PABPC1-201ENST00000318607 CKAP2Q8WWK9 683 aa15.09■□□□□ 0.01
PABPC1-201ENST00000318607 POMGNT1Q8WZA1 660 aa15.09■□□□□ 0.01
PABPC1-201ENST00000318607 AMNQ9BXJ7 453 aa15.09■□□□□ 0.01
PABPC1-201ENST00000318607 BCORQ6W2J9 1755 aa15.09■□□□□ 0.01
PABPC1-201ENST00000318607 FAM47DPA6NHR8 397 aa15.09■□□□□ 0.01
PABPC1-201ENST00000318607 SLC1A5Q15758 541 aa15.09■□□□□ 0.01
PABPC1-201ENST00000318607 ZNF668Q96K58 619 aaPredicted RBP15.09■□□□□ 0.01
PABPC1-201ENST00000318607 SH3GL3Q99963 347 aa15.09■□□□□ 0.01
PABPC1-201ENST00000318607 ZNF577Q9BSK1 485 aa15.09■□□□□ 0.01
PABPC1-201ENST00000318607 GINM1Q9NU53 330 aa15.09■□□□□ 0.01
PABPC1-201ENST00000318607 ARHGAP42A6NI28 874 aa15.08■□□□□ 0.01
PABPC1-201ENST00000318607 OPHN1O60890 802 aa15.08■□□□□ 0.01
PABPC1-201ENST00000318607 GSTA1P08263 222 aa15.08■□□□□ 0.01
PABPC1-201ENST00000318607 KCNA3P22001 575 aa15.08■□□□□ 0.01
PABPC1-201ENST00000318607 ATP5DP30049 168 aa15.08■□□□□ 0.01
PABPC1-201ENST00000318607 MAGEA4P43358 317 aa15.08■□□□□ 0.01
PABPC1-201ENST00000318607 JAM2P57087 298 aa15.08■□□□□ 0.01
PABPC1-201ENST00000318607 RHBDL3P58872 404 aa15.08■□□□□ 0.01
PABPC1-201ENST00000318607 KLC1Q07866 573 aa15.08■□□□□ 0.01
PABPC1-201ENST00000318607 THOC5Q13769 683 aaKnown RBP15.08■□□□□ 0.01
PABPC1-201ENST00000318607 EMC10Q5UCC4 262 aa15.08■□□□□ 0.01
PABPC1-201ENST00000318607 PLA2G4FQ68DD2 849 aa15.08■□□□□ 0.01
PABPC1-201ENST00000318607 CGB2Q6NT52 195 aa15.08■□□□□ 0.01
PABPC1-201ENST00000318607 ANKRD35Q8N283 1001 aa15.08■□□□□ 0.01
PABPC1-201ENST00000318607 SNF8Q96H20 258 aa15.08■□□□□ 0.01
PABPC1-201ENST00000318607 GBP5Q96PP8 586 aa15.08■□□□□ 0.01
PABPC1-201ENST00000318607 LXNQ9BS40 222 aa15.08■□□□□ 0.01
PABPC1-201ENST00000318607 AAASQ9NRG9 546 aa15.08■□□□□ 0.01
PABPC1-201ENST00000318607 WRAP73Q9P2S5 460 aaPredicted RBP15.08■□□□□ 0.01
PABPC1-201ENST00000318607 HEY2Q9UBP5 337 aa15.08■□□□□ 0.01
PABPC1-201ENST00000318607 EP400Q96L91 3159 aa15.08■□□□□ 0
PABPC1-201ENST00000318607 MEIS2O14770 477 aa15.08■□□□□ 0
PABPC1-201ENST00000318607 GH2P01242 217 aa15.08■□□□□ 0
PABPC1-201ENST00000318607 ARP10275 920 aa15.08■□□□□ 0
PABPC1-201ENST00000318607 TNNI1P19237 187 aa15.08■□□□□ 0
PABPC1-201ENST00000318607 PCNX4Q63HM2 1172 aa15.08■□□□□ 0
PABPC1-201ENST00000318607 RILPQ96NA2 401 aa15.08■□□□□ 0
PABPC1-201ENST00000318607 USP1O94782 785 aa15.08■□□□□ 0
PABPC1-201ENST00000318607 ENO1P06733 434 aaKnown RBP15.08■□□□□ 0
PABPC1-201ENST00000318607 PAPOLAP51003 745 aaKnown RBP15.08■□□□□ 0
PABPC1-201ENST00000318607 ARSEP51690 589 aa15.08■□□□□ 0
PABPC1-201ENST00000318607 NLRP9Q7RTR0 991 aa15.08■□□□□ 0
PABPC1-201ENST00000318607 C3orf20Q8ND61 904 aa15.08■□□□□ 0
PABPC1-201ENST00000318607 TBC1D16Q8TBP0 767 aa15.08■□□□□ 0
PABPC1-201ENST00000318607 TAS1R2Q8TE23 839 aa15.08■□□□□ 0
PABPC1-201ENST00000318607 SLC13A1Q9BZW2 595 aa15.08■□□□□ 0
PABPC1-201ENST00000318607 NYXQ9GZU5 481 aa15.08■□□□□ 0
PABPC1-201ENST00000318607 RNPEPL1Q9HAU8 725 aa15.08■□□□□ 0
PABPC1-201ENST00000318607 WASF2Q9Y6W5 498 aa15.08■□□□□ 0
PABPC1-201ENST00000318607 PITPNM2Q9BZ72 1349 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms