RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 MXI1P50539 228 aa16.67■□□□□ 0.26
PDLIM5-202ENST00000318007 IKBKEQ14164 716 aa16.67■□□□□ 0.26
PDLIM5-202ENST00000318007 FKBP15Q5T1M5 1219 aa16.67■□□□□ 0.26
PDLIM5-202ENST00000318007 TDRD10Q5VZ19 366 aaKnown RBP16.67■□□□□ 0.26
PDLIM5-202ENST00000318007 SARM1Q6SZW1 724 aa16.67■□□□□ 0.26
PDLIM5-202ENST00000318007 RPS6KC1Q96S38 1066 aa16.67■□□□□ 0.26
PDLIM5-202ENST00000318007 RSAD1Q9HA92 442 aa16.67■□□□□ 0.26
PDLIM5-202ENST00000318007 FAM207AQ9NSI2 230 aaPredicted RBP16.67■□□□□ 0.26
PDLIM5-202ENST00000318007 GCNT4Q9P109 453 aa16.67■□□□□ 0.26
PDLIM5-202ENST00000318007 ANK1P16157 1881 aa16.67■□□□□ 0.26
PDLIM5-202ENST00000318007 PHACTR2O75167 634 aa16.66■□□□□ 0.26
PDLIM5-202ENST00000318007 DEFB103AP81534 67 aa16.66■□□□□ 0.26
PDLIM5-202ENST00000318007 FPGSQ05932 587 aa16.66■□□□□ 0.26
PDLIM5-202ENST00000318007 NR1I3Q14994 352 aa16.66■□□□□ 0.26
PDLIM5-202ENST00000318007 TMEM132DQ14C87 1099 aa16.66■□□□□ 0.26
PDLIM5-202ENST00000318007 SYCP1Q15431 976 aa16.66■□□□□ 0.26
PDLIM5-202ENST00000318007 CNKSR3Q6P9H4 555 aa16.66■□□□□ 0.26
PDLIM5-202ENST00000318007 SV2AQ7L0J3 742 aa16.66■□□□□ 0.26
PDLIM5-202ENST00000318007 TAS1R2Q8TE23 839 aa16.66■□□□□ 0.26
PDLIM5-202ENST00000318007 APBB2Q92870 758 aa16.66■□□□□ 0.26
PDLIM5-202ENST00000318007 CGRRF1Q99675 332 aa16.66■□□□□ 0.26
PDLIM5-202ENST00000318007 MIOSQ9NXC5 875 aa16.66■□□□□ 0.26
PDLIM5-202ENST00000318007 LRRC10BA6NIK2 292 aa16.66■□□□□ 0.26
PDLIM5-202ENST00000318007 MAPK13O15264 365 aa16.66■□□□□ 0.26
PDLIM5-202ENST00000318007 SLC9A1P19634 815 aa16.66■□□□□ 0.26
PDLIM5-202ENST00000318007 RAB27AP51159 221 aa16.66■□□□□ 0.26
PDLIM5-202ENST00000318007 PAN2Q504Q3 1202 aaKnown RBP16.66■□□□□ 0.26
PDLIM5-202ENST00000318007 C16orf59Q7L2K0 433 aa16.66■□□□□ 0.26
PDLIM5-202ENST00000318007 TMC6Q7Z403 805 aa16.66■□□□□ 0.26
PDLIM5-202ENST00000318007 USP37Q86T82 979 aa16.66■□□□□ 0.26
PDLIM5-202ENST00000318007 HACE1Q8IYU2 909 aa16.66■□□□□ 0.26
PDLIM5-202ENST00000318007 HCSTQ9UBK5 93 aa16.66■□□□□ 0.26
PDLIM5-202ENST00000318007 LRFN2Q9ULH4 789 aa16.66■□□□□ 0.26
PDLIM5-202ENST00000318007 PCDHB7Q9Y5E2 793 aa16.66■□□□□ 0.26
PDLIM5-202ENST00000318007 SMIM28A0A1B0GU29 152 aa16.65■□□□□ 0.26
PDLIM5-202ENST00000318007 PTGESO14684 152 aa16.65■□□□□ 0.26
PDLIM5-202ENST00000318007 CBFA2T2O43439 604 aa16.65■□□□□ 0.26
PDLIM5-202ENST00000318007 ITGB3P05106 788 aa16.65■□□□□ 0.26
PDLIM5-202ENST00000318007 TPM3P06753 285 aa16.65■□□□□ 0.26
PDLIM5-202ENST00000318007 PIK3CAP42336 1068 aa16.65■□□□□ 0.26
PDLIM5-202ENST00000318007 GOLGA8FQ08AF8 430 aa16.65■□□□□ 0.26
PDLIM5-202ENST00000318007 GOLGA8DPQ0D2H9 430 aa16.65■□□□□ 0.26
PDLIM5-202ENST00000318007 ZNF365Q70YC5 407 aa16.65■□□□□ 0.26
PDLIM5-202ENST00000318007 TMC2Q8TDI7 906 aa16.65■□□□□ 0.26
PDLIM5-202ENST00000318007 CPLX3Q8WVH0 158 aa16.65■□□□□ 0.26
PDLIM5-202ENST00000318007 ANP32BQ92688 251 aaKnown RBP16.65■□□□□ 0.26
PDLIM5-202ENST00000318007 IL18RAPO95256 599 aa16.64■□□□□ 0.25
PDLIM5-202ENST00000318007 PARNO95453 639 aaKnown RBP16.64■□□□□ 0.25
PDLIM5-202ENST00000318007 CST3P01034 146 aaPredicted RBP16.64■□□□□ 0.25
PDLIM5-202ENST00000318007 CLLU1OSQ5K130 101 aa16.64■□□□□ 0.25
PDLIM5-202ENST00000318007 KRT39Q6A163 491 aa16.64■□□□□ 0.25
PDLIM5-202ENST00000318007 SPOPLQ6IQ16 392 aa16.64■□□□□ 0.25
PDLIM5-202ENST00000318007 GJB7Q6PEY0 223 aa16.64■□□□□ 0.25
PDLIM5-202ENST00000318007 WDR49Q8IV35 697 aa16.64■□□□□ 0.25
PDLIM5-202ENST00000318007 GSTCDQ8NEC7 633 aa16.64■□□□□ 0.25
PDLIM5-202ENST00000318007 SEMA4DQ92854 862 aa16.64■□□□□ 0.25
PDLIM5-202ENST00000318007 ANKRD36BP1Q96IX9 119 aa16.64■□□□□ 0.25
PDLIM5-202ENST00000318007 IL23AQ9NPF7 189 aa16.64■□□□□ 0.25
PDLIM5-202ENST00000318007 MICAL3Q7RTP6 2002 aa16.64■□□□□ 0.25
PDLIM5-202ENST00000318007 CASTOR2A6NHX0 329 aa16.64■□□□□ 0.25
PDLIM5-202ENST00000318007 EPHB6O15197 1021 aa16.64■□□□□ 0.25
PDLIM5-202ENST00000318007 RFC2P35250 354 aa16.64■□□□□ 0.25
PDLIM5-202ENST00000318007 SOX4Q06945 474 aaPredicted RBP16.64■□□□□ 0.25
PDLIM5-202ENST00000318007 KCNMA1Q12791 1236 aa16.64■□□□□ 0.25
PDLIM5-202ENST00000318007 KYAT1Q16773 422 aa16.64■□□□□ 0.25
PDLIM5-202ENST00000318007 EXOC3L4Q17RC7 722 aa16.64■□□□□ 0.25
PDLIM5-202ENST00000318007 DUOXA2Q1HG44 320 aa16.64■□□□□ 0.25
PDLIM5-202ENST00000318007 TRAPPC11Q7Z392 1133 aa16.64■□□□□ 0.25
PDLIM5-202ENST00000318007 RPUSD2Q8IZ73 545 aaKnown RBP16.64■□□□□ 0.25
PDLIM5-202ENST00000318007 ABI1Q8IZP0 508 aa16.64■□□□□ 0.25
PDLIM5-202ENST00000318007 C1orf127Q8N9H9 656 aa16.64■□□□□ 0.25
PDLIM5-202ENST00000318007 PGBD4Q96DM1 585 aa16.64■□□□□ 0.25
PDLIM5-202ENST00000318007 LBHD1Q9BQE6 289 aaPredicted RBP16.64■□□□□ 0.25
PDLIM5-202ENST00000318007 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.64■□□□□ 0.259e-7■□□□□ 10.7
PDLIM5-202ENST00000318007 LSM14BQ9BX40 385 aaKnown RBP16.64■□□□□ 0.25
PDLIM5-202ENST00000318007 TMEM8AQ9HCN3 771 aa16.64■□□□□ 0.25
PDLIM5-202ENST00000318007 CXXC1Q9P0U4 656 aaPredicted RBP16.64■□□□□ 0.25
PDLIM5-202ENST00000318007 CNTN3Q9P232 1028 aa16.64■□□□□ 0.25
PDLIM5-202ENST00000318007 PPEF2O14830 753 aa16.63■□□□□ 0.25
PDLIM5-202ENST00000318007 TNNC2P02585 160 aa16.63■□□□□ 0.25
PDLIM5-202ENST00000318007 IGFBP6P24592 240 aaPredicted RBP16.63■□□□□ 0.25
PDLIM5-202ENST00000318007 POLR2BP30876 1174 aaKnown RBP16.63■□□□□ 0.25
PDLIM5-202ENST00000318007 ALKAL1Q6UXT8 129 aa16.63■□□□□ 0.25
PDLIM5-202ENST00000318007 ZNF598Q86UK7 904 aaKnown RBP16.63■□□□□ 0.25
PDLIM5-202ENST00000318007 HASPINQ8TF76 798 aa16.63■□□□□ 0.25
PDLIM5-202ENST00000318007 PAAF1Q9BRP4 392 aa16.63■□□□□ 0.25
PDLIM5-202ENST00000318007 ASB7Q9H672 318 aa16.63■□□□□ 0.25
PDLIM5-202ENST00000318007 C1orf112Q9NSG2 853 aa16.63■□□□□ 0.25
PDLIM5-202ENST00000318007 LTBP2Q14767 1821 aa16.62■□□□□ 0.25
PDLIM5-202ENST00000318007 ZNF623O75123 536 aa16.62■□□□□ 0.25
PDLIM5-202ENST00000318007 VNN1O95497 513 aa16.62■□□□□ 0.25
PDLIM5-202ENST00000318007 C4BPAP04003 597 aaKnown RBP16.62■□□□□ 0.25
PDLIM5-202ENST00000318007 TRIM21P19474 475 aaKnown RBP16.62■□□□□ 0.25
PDLIM5-202ENST00000318007 WDR5P61964 334 aaKnown RBP16.62■□□□□ 0.25
PDLIM5-202ENST00000318007 PPIGQ13427 754 aaKnown RBP eCLIP16.62■□□□□ 0.25
PDLIM5-202ENST00000318007 GLB1LQ6UWU2 654 aa16.62■□□□□ 0.25
PDLIM5-202ENST00000318007 MRPL10Q7Z7H8 261 aaKnown RBP16.62■□□□□ 0.25
PDLIM5-202ENST00000318007 TRAIPQ9BWF2 469 aa16.62■□□□□ 0.25
PDLIM5-202ENST00000318007 TMEM161AQ9NX61 479 aa16.62■□□□□ 0.25
PDLIM5-202ENST00000318007 DPP3Q9NY33 737 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms