RNA–Protein interactions for RNA: ENST00000317840.9

COL3A1-202, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2 BASIC

Gene COL3A1, Length 3,873 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-202ENST00000317840 PPP2R5CQ13362 524 aa11.21□□□□□ -0.61
COL3A1-202ENST00000317840 DPY19L2P1Q6NXN4 242 aa11.21□□□□□ -0.61
COL3A1-202ENST00000317840 EXOC3L1Q86VI1 746 aa11.21□□□□□ -0.61
COL3A1-202ENST00000317840 TAS1R2Q8TE23 839 aa11.21□□□□□ -0.61
COL3A1-202ENST00000317840 HAUS1Q96CS2 278 aa11.21□□□□□ -0.61
COL3A1-202ENST00000317840 ZNF668Q96K58 619 aaPredicted RBP11.21□□□□□ -0.61
COL3A1-202ENST00000317840 KCND2Q9NZV8 630 aa11.21□□□□□ -0.61
COL3A1-202ENST00000317840 PCYOX1Q9UHG3 505 aa11.21□□□□□ -0.61
COL3A1-202ENST00000317840 LAMB1P07942 1786 aa11.21□□□□□ -0.61
COL3A1-202ENST00000317840 ATP6V1G2O95670 118 aa11.21□□□□□ -0.62
COL3A1-202ENST00000317840 PLS3P13797 630 aa11.21□□□□□ -0.62
COL3A1-202ENST00000317840 CAP2P40123 477 aa11.21□□□□□ -0.62
COL3A1-202ENST00000317840 SLC5A5Q92911 643 aa11.21□□□□□ -0.62
COL3A1-202ENST00000317840 CENPTQ96BT3 561 aa11.21□□□□□ -0.62
COL3A1-202ENST00000317840 STAMBPL1Q96FJ0 436 aa11.21□□□□□ -0.62
COL3A1-202ENST00000317840 BORCS6Q96GS4 357 aa11.21□□□□□ -0.62
COL3A1-202ENST00000317840 FAM213AQ9BRX8 229 aa11.21□□□□□ -0.62
COL3A1-202ENST00000317840 IDI2Q9BXS1 227 aa11.21□□□□□ -0.62
COL3A1-202ENST00000317840 MTFR1LQ9H019 292 aa11.21□□□□□ -0.62
COL3A1-202ENST00000317840 ETNK1Q9HBU6 452 aa11.21□□□□□ -0.62
COL3A1-202ENST00000317840 UVRAGQ9P2Y5 699 aa11.21□□□□□ -0.62
COL3A1-202ENST00000317840 CEP83Q9Y592 693 aa11.21□□□□□ -0.62
COL3A1-202ENST00000317840 MYH7BA7E2Y1 1941 aa11.21□□□□□ -0.62
COL3A1-202ENST00000317840 UBE4BO95155 1302 aa11.21□□□□□ -0.62
COL3A1-202ENST00000317840 NAV1Q8NEY1 1877 aa11.21□□□□□ -0.62
COL3A1-202ENST00000317840 COL22A1Q8NFW1 1626 aaPredicted RBP11.2□□□□□ -0.62
COL3A1-202ENST00000317840 EGFRP00533 1210 aa11.2□□□□□ -0.62
COL3A1-202ENST00000317840 CYP3A4P08684 503 aa11.2□□□□□ -0.62
COL3A1-202ENST00000317840 CD58P19256 250 aa11.2□□□□□ -0.62
COL3A1-202ENST00000317840 ALDH3A1P30838 453 aa11.2□□□□□ -0.62
COL3A1-202ENST00000317840 JAG1P78504 1218 aa11.2□□□□□ -0.62
COL3A1-202ENST00000317840 IL9RQ01113 521 aa11.2□□□□□ -0.62
COL3A1-202ENST00000317840 ITIH4Q14624 930 aa11.2□□□□□ -0.62
COL3A1-202ENST00000317840 CNGA2Q16280 664 aa11.2□□□□□ -0.62
COL3A1-202ENST00000317840 PREPLQ4J6C6 727 aaPredicted RBP11.2□□□□□ -0.62
COL3A1-202ENST00000317840 ZNF449Q6P9G9 518 aa11.2□□□□□ -0.62
COL3A1-202ENST00000317840 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.2□□□□□ -0.62
COL3A1-202ENST00000317840 MORC4Q8TE76 937 aa11.2□□□□□ -0.62
COL3A1-202ENST00000317840 CEP170P1Q96L14 293 aa11.2□□□□□ -0.62
COL3A1-202ENST00000317840 AS3MTQ9HBK9 375 aa11.2□□□□□ -0.62
COL3A1-202ENST00000317840 C5orf60A6NFR6 353 aa11.2□□□□□ -0.62
COL3A1-202ENST00000317840 ATP2A1O14983 1001 aa11.2□□□□□ -0.62
COL3A1-202ENST00000317840 NEBLO76041 1014 aa11.2□□□□□ -0.62
COL3A1-202ENST00000317840 GHRP10912 638 aa11.2□□□□□ -0.62
COL3A1-202ENST00000317840 GZMAP12544 262 aa11.2□□□□□ -0.62
COL3A1-202ENST00000317840 CNGA1P29973 690 aa11.2□□□□□ -0.62
COL3A1-202ENST00000317840 PTGIRP43119 386 aa11.2□□□□□ -0.62
COL3A1-202ENST00000317840 KCNJ2P63252 427 aa11.2□□□□□ -0.62
COL3A1-202ENST00000317840 ALCAMQ13740 583 aa11.2□□□□□ -0.62
COL3A1-202ENST00000317840 TRIM68Q6AZZ1 485 aa11.2□□□□□ -0.62
COL3A1-202ENST00000317840 BTNL9Q6UXG8 535 aa11.2□□□□□ -0.62
COL3A1-202ENST00000317840 CYFIP1Q7L576 1253 aa11.2□□□□□ -0.62
COL3A1-202ENST00000317840 NSMCE1Q8WV22 266 aa11.2□□□□□ -0.62
COL3A1-202ENST00000317840 SEC14L1Q92503 715 aa11.2□□□□□ -0.62
COL3A1-202ENST00000317840 ATG4CQ96DT6 458 aa11.2□□□□□ -0.62
COL3A1-202ENST00000317840 MXRA8Q9BRK3 442 aa11.2□□□□□ -0.62
COL3A1-202ENST00000317840 SAYSD1Q9NPB0 183 aa11.2□□□□□ -0.62
COL3A1-202ENST00000317840 RNF146Q9NTX7 359 aa11.2□□□□□ -0.62
COL3A1-202ENST00000317840 RAB20Q9NX57 234 aa11.2□□□□□ -0.62
COL3A1-202ENST00000317840 DLEC1Q9Y238 1755 aa11.2□□□□□ -0.62
COL3A1-202ENST00000317840 CFAP73A6NFT4 308 aa11.2□□□□□ -0.62
COL3A1-202ENST00000317840 PI4K2BG5E9Z4 385 aa11.2□□□□□ -0.62
COL3A1-202ENST00000317840 NFIBO00712 420 aa11.2□□□□□ -0.62
COL3A1-202ENST00000317840 SNX3O60493 162 aa11.2□□□□□ -0.62
COL3A1-202ENST00000317840 RALAP11233 206 aa11.2□□□□□ -0.62
COL3A1-202ENST00000317840 ITIH2P19823 946 aa11.2□□□□□ -0.62
COL3A1-202ENST00000317840 CHKAP35790 457 aa11.2□□□□□ -0.62
COL3A1-202ENST00000317840 STRN3Q13033 797 aa11.2□□□□□ -0.62
COL3A1-202ENST00000317840 XRCC4Q13426 336 aa11.2□□□□□ -0.62
COL3A1-202ENST00000317840 MTM1Q13496 603 aa11.2□□□□□ -0.62
COL3A1-202ENST00000317840 HHATQ5VTY9 493 aa11.2□□□□□ -0.62
COL3A1-202ENST00000317840 DCUN1D2Q6PH85 259 aa11.2□□□□□ -0.62
COL3A1-202ENST00000317840 FAM160B2Q86V87 743 aa11.2□□□□□ -0.62
COL3A1-202ENST00000317840 GBP7Q8N8V2 638 aaPredicted RBP11.2□□□□□ -0.62
COL3A1-202ENST00000317840 CCDC89Q8N998 374 aa11.2□□□□□ -0.62
COL3A1-202ENST00000317840 KCNV2Q8TDN2 545 aa11.2□□□□□ -0.62
COL3A1-202ENST00000317840 OTUD5Q96G74 571 aa11.2□□□□□ -0.62
COL3A1-202ENST00000317840 ROPN1BQ9BZX4 212 aaPredicted RBP11.2□□□□□ -0.62
COL3A1-202ENST00000317840 ROPN1Q9HAT0 212 aaPredicted RBP11.2□□□□□ -0.62
COL3A1-202ENST00000317840 EP400Q96L91 3159 aa11.19□□□□□ -0.62
COL3A1-202ENST00000317840 DIAPH2O60879 1101 aa11.19□□□□□ -0.62
COL3A1-202ENST00000317840 RRM1P23921 792 aa11.19□□□□□ -0.62
COL3A1-202ENST00000317840 MAN1A1P33908 653 aa11.19□□□□□ -0.62
COL3A1-202ENST00000317840 RARRES1P49788 294 aa11.19□□□□□ -0.62
COL3A1-202ENST00000317840 BAATQ14032 418 aaPredicted RBP11.19□□□□□ -0.62
COL3A1-202ENST00000317840 IZUMO3Q5VZ72 239 aa11.19□□□□□ -0.62
COL3A1-202ENST00000317840 MCF2L2Q86YR7 1114 aa11.19□□□□□ -0.62
COL3A1-202ENST00000317840 KCTD17Q8N5Z5 321 aa11.19□□□□□ -0.62
COL3A1-202ENST00000317840 ZNF317Q96PQ6 595 aaPredicted RBP11.19□□□□□ -0.62
COL3A1-202ENST00000317840 GPR88Q9GZN0 384 aa11.19□□□□□ -0.62
COL3A1-202ENST00000317840 ARL2BPQ9Y2Y0 163 aa11.19□□□□□ -0.62
COL3A1-202ENST00000317840 PCDHA3Q9Y5H8 950 aa11.19□□□□□ -0.62
COL3A1-202ENST00000317840 WDR91A4D1P6 747 aa11.19□□□□□ -0.62
COL3A1-202ENST00000317840 DNAJC8O75937 253 aaPredicted RBP11.19□□□□□ -0.62
COL3A1-202ENST00000317840 DDNO94850 711 aaPredicted RBP11.19□□□□□ -0.62
COL3A1-202ENST00000317840 GH1P01241 217 aa11.19□□□□□ -0.62
COL3A1-202ENST00000317840 CA4P22748 312 aa11.19□□□□□ -0.62
COL3A1-202ENST00000317840 LIG4P49917 911 aa11.19□□□□□ -0.62
COL3A1-202ENST00000317840 SOX10P56693 466 aa11.19□□□□□ -0.62
COL3A1-202ENST00000317840 CDR2Q01850 454 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms