RNA–Protein interactions for RNA: ENST00000316673.8

HNF4A-202, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best) BASIC

Gene HNF4A, Length 1,470 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-202ENST00000316673 RAD9AQ99638 391 aa16.71■□□□□ 0.27
HNF4A-202ENST00000316673 NAA15Q9BXJ9 866 aaKnown RBP16.71■□□□□ 0.27
HNF4A-202ENST00000316673 MRPL9Q9BYD2 267 aaKnown RBP16.71■□□□□ 0.27
HNF4A-202ENST00000316673 TMEM117Q9H0C3 514 aa16.71■□□□□ 0.27
HNF4A-202ENST00000316673 RSAD1Q9HA92 442 aa16.71■□□□□ 0.27
HNF4A-202ENST00000316673 PLEKHA5Q9HAU0 1116 aa16.71■□□□□ 0.27
HNF4A-202ENST00000316673 KANSL3Q9P2N6 904 aa16.71■□□□□ 0.27
HNF4A-202ENST00000316673 ZKSCAN5Q9Y2L8 839 aa16.71■□□□□ 0.27
HNF4A-202ENST00000316673 DAAM1Q9Y4D1 1078 aa16.71■□□□□ 0.27
HNF4A-202ENST00000316673 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.71■□□□□ 0.27
HNF4A-202ENST00000316673 GTPBP10A4D1E9 387 aaKnown RBP16.7■□□□□ 0.26
HNF4A-202ENST00000316673 EXTL3O43909 919 aa16.7■□□□□ 0.26
HNF4A-202ENST00000316673 DGKIO75912 1065 aa16.7■□□□□ 0.26
HNF4A-202ENST00000316673 UPP2O95045 317 aa16.7■□□□□ 0.26
HNF4A-202ENST00000316673 KCNH2Q12809 1159 aa16.7■□□□□ 0.26
HNF4A-202ENST00000316673 TBX2Q13207 712 aaPredicted RBP16.7■□□□□ 0.26
HNF4A-202ENST00000316673 GPD1LQ8N335 351 aa16.7■□□□□ 0.26
HNF4A-202ENST00000316673 URGCPQ8TCY9 931 aa16.7■□□□□ 0.26
HNF4A-202ENST00000316673 YME1L1Q96TA2 773 aa16.7■□□□□ 0.26
HNF4A-202ENST00000316673 CBWD1Q9BRT8 395 aa16.7■□□□□ 0.26
HNF4A-202ENST00000316673 EDEM3Q9BZQ6 932 aa16.7■□□□□ 0.26
HNF4A-202ENST00000316673 NUCKS1Q9H1E3 243 aaKnown RBP16.7■□□□□ 0.26
HNF4A-202ENST00000316673 PARP2Q9UGN5 583 aa16.7■□□□□ 0.26
HNF4A-202ENST00000316673 CARNS1A5YM72 827 aa16.69■□□□□ 0.26
HNF4A-202ENST00000316673 TISP43B9A030 160 aa16.69■□□□□ 0.26
HNF4A-202ENST00000316673 INPPL1O15357 1258 aa16.69■□□□□ 0.26
HNF4A-202ENST00000316673 P4HA2O15460 535 aa16.69■□□□□ 0.26
HNF4A-202ENST00000316673 FAM189A1O60320 539 aa16.69■□□□□ 0.26
HNF4A-202ENST00000316673 IBSPP21815 317 aaPredicted RBP16.69■□□□□ 0.26
HNF4A-202ENST00000316673 HTRA4P83105 476 aaPredicted RBP16.69■□□□□ 0.26
HNF4A-202ENST00000316673 BFSP1Q12934 665 aa16.69■□□□□ 0.26
HNF4A-202ENST00000316673 AGMOQ6ZNB7 445 aa16.69■□□□□ 0.26
HNF4A-202ENST00000316673 FMNL3Q8IVF7 1028 aa16.69■□□□□ 0.26
HNF4A-202ENST00000316673 NEK11Q8NG66 645 aa16.69■□□□□ 0.26
HNF4A-202ENST00000316673 PANX2Q96RD6 677 aa16.69■□□□□ 0.26
HNF4A-202ENST00000316673 RPS6KC1Q96S38 1066 aa16.69■□□□□ 0.26
HNF4A-202ENST00000316673 APOL6Q9BWW8 343 aa16.69■□□□□ 0.26
HNF4A-202ENST00000316673 HAPLN2Q9GZV7 340 aa16.69■□□□□ 0.26
HNF4A-202ENST00000316673 RPF1Q9H9Y2 349 aaKnown RBP16.69■□□□□ 0.26
HNF4A-202ENST00000316673 ZNHIT6Q9NWK9 470 aaKnown RBP16.69■□□□□ 0.26
HNF4A-202ENST00000316673 SNTG2Q9NY99 539 aa16.69■□□□□ 0.26
HNF4A-202ENST00000316673 CPSF3Q9UKF6 684 aaKnown RBP16.69■□□□□ 0.26
HNF4A-202ENST00000316673 LUC7L2Q9Y383 392 aaKnown RBP16.69■□□□□ 0.26
HNF4A-202ENST00000316673 HES2Q9Y543 173 aa16.69■□□□□ 0.26
HNF4A-202ENST00000316673 A0A1W2PQJ5 194 aa16.68■□□□□ 0.26
HNF4A-202ENST00000316673 ZNF233A6NK53 670 aa16.68■□□□□ 0.26
HNF4A-202ENST00000316673 TLL1O43897 1013 aa16.68■□□□□ 0.26
HNF4A-202ENST00000316673 RECQL4O94761 1208 aa16.68■□□□□ 0.26
HNF4A-202ENST00000316673 SYCP1Q15431 976 aa16.68■□□□□ 0.26
HNF4A-202ENST00000316673 RAB30Q15771 203 aa16.68■□□□□ 0.26
HNF4A-202ENST00000316673 GBP6Q6ZN66 633 aa16.68■□□□□ 0.26
HNF4A-202ENST00000316673 CMTR2Q8IYT2 770 aaKnown RBP16.68■□□□□ 0.26
HNF4A-202ENST00000316673 ZNF689Q96CS4 500 aaPredicted RBP16.68■□□□□ 0.26
HNF4A-202ENST00000316673 FBXL18Q96ME1 805 aa16.68■□□□□ 0.26
HNF4A-202ENST00000316673 IKZF4Q9H2S9 585 aa16.68■□□□□ 0.26
HNF4A-202ENST00000316673 PCIF1Q9H4Z3 704 aa16.68■□□□□ 0.26
HNF4A-202ENST00000316673 PCDHA11Q9Y5I1 949 aa16.68■□□□□ 0.26
HNF4A-202ENST00000316673 ARL5CA6NH57 179 aa16.67■□□□□ 0.26
HNF4A-202ENST00000316673 OFD1O75665 1012 aa16.67■□□□□ 0.26
HNF4A-202ENST00000316673 IL18RAPO95256 599 aa16.67■□□□□ 0.26
HNF4A-202ENST00000316673 AKAP5P24588 427 aa16.67■□□□□ 0.26
HNF4A-202ENST00000316673 CASP4P49662 377 aa16.67■□□□□ 0.26
HNF4A-202ENST00000316673 VAMP7P51809 220 aa16.67■□□□□ 0.26
HNF4A-202ENST00000316673 OSTNP61366 133 aa16.67■□□□□ 0.26
HNF4A-202ENST00000316673 SURF1Q15526 300 aa16.67■□□□□ 0.26
HNF4A-202ENST00000316673 SNRNP35Q16560 246 aaKnown RBP16.67■□□□□ 0.26
HNF4A-202ENST00000316673 NOMO2Q5JPE7 1267 aa16.67■□□□□ 0.26
HNF4A-202ENST00000316673 CEP120Q8N960 986 aa16.67■□□□□ 0.26
HNF4A-202ENST00000316673 HELQQ8TDG4 1101 aa16.67■□□□□ 0.26
HNF4A-202ENST00000316673 TMC2Q8TDI7 906 aa16.67■□□□□ 0.26
HNF4A-202ENST00000316673 LPPQ93052 612 aa16.67■□□□□ 0.26
HNF4A-202ENST00000316673 FAM213AQ9BRX8 229 aa16.67■□□□□ 0.26
HNF4A-202ENST00000316673 RNF39Q9H2S5 420 aa16.67■□□□□ 0.26
HNF4A-202ENST00000316673 ASB7Q9H672 318 aa16.67■□□□□ 0.26
HNF4A-202ENST00000316673 MMRN2Q9H8L6 949 aa16.67■□□□□ 0.26
HNF4A-202ENST00000316673 RC3H2Q9HBD1 1191 aaKnown RBP16.67■□□□□ 0.26
HNF4A-202ENST00000316673 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.67■□□□□ 0.26
HNF4A-202ENST00000316673 CITO14578 2027 aa16.67■□□□□ 0.26
HNF4A-202ENST00000316673 COL4A6Q14031 1691 aa16.67■□□□□ 0.26
HNF4A-202ENST00000316673 CCP110O43303 1012 aa16.67■□□□□ 0.26
HNF4A-202ENST00000316673 ADRB2P07550 413 aa16.67■□□□□ 0.26
HNF4A-202ENST00000316673 FGFR1P11362 822 aa16.67■□□□□ 0.26
HNF4A-202ENST00000316673 GTF2H1P32780 548 aa16.67■□□□□ 0.26
HNF4A-202ENST00000316673 ACOT2P49753 483 aa16.67■□□□□ 0.26
HNF4A-202ENST00000316673 SMAD3P84022 425 aaKnown RBP16.67■□□□□ 0.26
HNF4A-202ENST00000316673 EXOC3L4Q17RC7 722 aa16.67■□□□□ 0.26
HNF4A-202ENST00000316673 LRIT3Q3SXY7 679 aa16.67■□□□□ 0.26
HNF4A-202ENST00000316673 XKR4Q5GH76 650 aa16.67■□□□□ 0.26
HNF4A-202ENST00000316673 CLLU1OSQ5K130 101 aa16.67■□□□□ 0.26
HNF4A-202ENST00000316673 FAM117BQ6P1L5 589 aa16.67■□□□□ 0.26
HNF4A-202ENST00000316673 CACNA2D4Q7Z3S7 1137 aa16.67■□□□□ 0.26
HNF4A-202ENST00000316673 NT5DC4Q86YG4 428 aa16.67■□□□□ 0.26
HNF4A-202ENST00000316673 LRRC43Q8N309 656 aa16.67■□□□□ 0.26
HNF4A-202ENST00000316673 SLC35C1Q96A29 364 aa16.67■□□□□ 0.26
HNF4A-202ENST00000316673 SAAL1Q96ER3 474 aa16.67■□□□□ 0.26
HNF4A-202ENST00000316673 BORCS6Q96GS4 357 aa16.67■□□□□ 0.26
HNF4A-202ENST00000316673 SNX27Q96L92 541 aa16.67■□□□□ 0.26
HNF4A-202ENST00000316673 GAD1Q99259 594 aa16.67■□□□□ 0.26
HNF4A-202ENST00000316673 SLC38A7Q9NVC3 462 aa16.67■□□□□ 0.26
HNF4A-202ENST00000316673 MSRAQ9UJ68 235 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms