RNA–Protein interactions for RNA: ENST00000316407.8

USF3-201, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 13,708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-201ENST00000316407 XPOTO43592 962 aaKnown RBP9.18□□□□□ -0.94
USF3-201ENST00000316407 FCER1AP12319 257 aa9.18□□□□□ -0.94
USF3-201ENST00000316407 MEI1Q5TIA1 1274 aa9.18□□□□□ -0.94
USF3-201ENST00000316407 PPP1R2P3Q6NXS1 205 aa9.18□□□□□ -0.94
USF3-201ENST00000316407 RRM2BQ7LG56 351 aa9.18□□□□□ -0.94
USF3-201ENST00000316407 SLC30A5Q8TAD4 765 aa9.18□□□□□ -0.94
USF3-201ENST00000316407 SCG3Q8WXD2 468 aaKnown RBP9.18□□□□□ -0.94
USF3-201ENST00000316407 PDZK1P1A8MUH7 402 aa9.17□□□□□ -0.94
USF3-201ENST00000316407 ADARP55265 1226 aaKnown RBP9.17□□□□□ -0.94
USF3-201ENST00000316407 ARF5P84085 180 aa9.17□□□□□ -0.94
USF3-201ENST00000316407 CUL4AQ13619 759 aa9.17□□□□□ -0.94
USF3-201ENST00000316407 ARMC4Q5T2S8 1044 aa9.17□□□□□ -0.94
USF3-201ENST00000316407 OSBPL8Q9BZF1 889 aa9.17□□□□□ -0.94
USF3-201ENST00000316407 LRRC4Q9HBW1 653 aa9.17□□□□□ -0.94
USF3-201ENST00000316407 USP17L3A6NCW0 530 aa9.17□□□□□ -0.94
USF3-201ENST00000316407 USP17L4A6NCW7 530 aa9.17□□□□□ -0.94
USF3-201ENST00000316407 SPDYE5A6NIY4 337 aa9.17□□□□□ -0.94
USF3-201ENST00000316407 OSBPP22059 807 aa9.17□□□□□ -0.94
USF3-201ENST00000316407 COPAP53621 1224 aa9.17□□□□□ -0.94
USF3-201ENST00000316407 NLRP11P59045 1033 aaKnown RBP9.17□□□□□ -0.94
USF3-201ENST00000316407 SPDYE7PQ495Y7 208 aa9.17□□□□□ -0.94
USF3-201ENST00000316407 USP17L1Q7RTZ2 530 aa9.17□□□□□ -0.94
USF3-201ENST00000316407 MTDHQ86UE4 582 aaKnown RBP9.17□□□□□ -0.94
USF3-201ENST00000316407 MSTO1Q9BUK6 570 aa9.17□□□□□ -0.94
USF3-201ENST00000316407 PLEKHA8P1O95397 391 aa9.17□□□□□ -0.94
USF3-201ENST00000316407 USP17L2Q6R6M4 530 aa9.17□□□□□ -0.94
USF3-201ENST00000316407 KRT73Q86Y46 540 aa9.17□□□□□ -0.94
USF3-201ENST00000316407 BBS5Q8N3I7 341 aa9.17□□□□□ -0.94
USF3-201ENST00000316407 CATSPER2Q96P56 530 aa9.17□□□□□ -0.94
USF3-201ENST00000316407 CYP26B1Q9NR63 512 aa9.17□□□□□ -0.94
USF3-201ENST00000316407 MAP2P11137 1827 aaKnown RBP9.17□□□□□ -0.94
USF3-201ENST00000316407 SH2B2O14492 632 aaPredicted RBP9.17□□□□□ -0.94
USF3-201ENST00000316407 USP1O94782 785 aa9.17□□□□□ -0.94
USF3-201ENST00000316407 LCA5LO95447 670 aa9.17□□□□□ -0.94
USF3-201ENST00000316407 RNF19BQ6ZMZ0 732 aa9.17□□□□□ -0.94
USF3-201ENST00000316407 SENP7Q9BQF6 1050 aa9.17□□□□□ -0.94
USF3-201ENST00000316407 PAIP1Q9H074 479 aaKnown RBP9.17□□□□□ -0.94
USF3-201ENST00000316407 IL1RAPL1Q9NZN1 696 aa9.17□□□□□ -0.94
USF3-201ENST00000316407 STX3Q13277 289 aa9.17□□□□□ -0.94
USF3-201ENST00000316407 FMR1NBQ8N0W7 255 aaPredicted RBP9.17□□□□□ -0.94
USF3-201ENST00000316407 SMG5Q9UPR3 1016 aaKnown RBP9.17□□□□□ -0.94
USF3-201ENST00000316407 AHCYL1O43865 530 aa9.17□□□□□ -0.94
USF3-201ENST00000316407 PHKA1P46020 1223 aa9.17□□□□□ -0.94
USF3-201ENST00000316407 NME5P56597 212 aa9.17□□□□□ -0.94
USF3-201ENST00000316407 HDHD2Q9H0R4 259 aa9.17□□□□□ -0.94
USF3-201ENST00000316407 WNT8AQ9H1J5 351 aa9.17□□□□□ -0.94
USF3-201ENST00000316407 C5orf58C9J3I9 102 aa9.17□□□□□ -0.94
USF3-201ENST00000316407 ARL6IP4Q66PJ3 421 aaKnown RBP9.17□□□□□ -0.94
USF3-201ENST00000316407 IMPAD1Q9NX62 359 aa9.17□□□□□ -0.94
USF3-201ENST00000316407 FAM32AQ9Y421 112 aaKnown RBP9.17□□□□□ -0.94
USF3-201ENST00000316407 NUP160Q12769 1436 aa9.17□□□□□ -0.94
USF3-201ENST00000316407 TCP10L2B9ZVM9 353 aa9.17□□□□□ -0.94
USF3-201ENST00000316407 CALB1P05937 261 aa9.17□□□□□ -0.94
USF3-201ENST00000316407 COASYQ13057 564 aa9.17□□□□□ -0.94
USF3-201ENST00000316407 SYTL1Q8IYJ3 562 aa9.17□□□□□ -0.94
USF3-201ENST00000316407 FAM193BQ96PV7 902 aaPredicted RBP9.17□□□□□ -0.94
USF3-201ENST00000316407 POLE3Q9NRF9 147 aa9.17□□□□□ -0.94
USF3-201ENST00000316407 MAST3O60307 1309 aa9.17□□□□□ -0.94
USF3-201ENST00000316407 ZNF263O14978 683 aa9.17□□□□□ -0.94
USF3-201ENST00000316407 PRKAB2O43741 272 aa9.17□□□□□ -0.94
USF3-201ENST00000316407 TCF3P15923 654 aa9.17□□□□□ -0.94
USF3-201ENST00000316407 ATP6V1B2P21281 511 aa9.17□□□□□ -0.94
USF3-201ENST00000316407 TSC22D1Q15714 1073 aa9.17□□□□□ -0.94
USF3-201ENST00000316407 ENTPD7Q9NQZ7 604 aa9.17□□□□□ -0.94
USF3-201ENST00000316407 XPO7Q9UIA9 1087 aaKnown RBP9.17□□□□□ -0.94
USF3-201ENST00000316407 IL12RB1P42701 662 aa9.17□□□□□ -0.94
USF3-201ENST00000316407 CDH6P55285 790 aa9.17□□□□□ -0.94
USF3-201ENST00000316407 CHSY1Q86X52 802 aa9.17□□□□□ -0.94
USF3-201ENST00000316407 DYNLL1P63167 89 aaKnown RBP9.17□□□□□ -0.94
USF3-201ENST00000316407 DRAP1Q14919 205 aaPredicted RBP9.17□□□□□ -0.94
USF3-201ENST00000316407 SLC27A3Q5K4L6 730 aa9.17□□□□□ -0.94
USF3-201ENST00000316407 C19orf18Q8NEA5 215 aa9.17□□□□□ -0.94
USF3-201ENST00000316407 RUBCNQ92622 972 aa9.17□□□□□ -0.94
USF3-201ENST00000316407 PLEKHA8Q96JA3 519 aa9.17□□□□□ -0.94
USF3-201ENST00000316407 MRPL11Q9Y3B7 192 aaKnown RBP9.17□□□□□ -0.94
USF3-201ENST00000316407 HOXC9P31274 260 aa9.16□□□□□ -0.94
USF3-201ENST00000316407 AVPR1AP37288 418 aa9.16□□□□□ -0.94
USF3-201ENST00000316407 ZMYM1Q5SVZ6 1142 aa9.16□□□□□ -0.94
USF3-201ENST00000316407 LMCD1Q9NZU5 365 aa9.16□□□□□ -0.94
USF3-201ENST00000316407 CHORDC1Q9UHD1 332 aaPredicted RBP9.16□□□□□ -0.94
USF3-201ENST00000316407 RBMX2Q9Y388 322 aaKnown RBP9.16□□□□□ -0.94
USF3-201ENST00000316407 CHL1O00533 1208 aa9.16□□□□□ -0.94
USF3-201ENST00000316407 EIF3EP60228 445 aaKnown RBP9.16□□□□□ -0.94
USF3-201ENST00000316407 PTPN12Q05209 780 aaKnown RBP9.16□□□□□ -0.94
USF3-201ENST00000316407 C12orf60Q5U649 245 aa9.16□□□□□ -0.94
USF3-201ENST00000316407 NACC1Q96RE7 527 aa9.16□□□□□ -0.94
USF3-201ENST00000316407 ZC3H7BQ9UGR2 993 aaKnown RBP9.16□□□□□ -0.94
USF3-201ENST00000316407 CDHR2Q9BYE9 1310 aa9.16□□□□□ -0.94
USF3-201ENST00000316407 ATP9BO43861 1147 aa9.16□□□□□ -0.94
USF3-201ENST00000316407 SLC29A2Q14542 456 aa9.16□□□□□ -0.94
USF3-201ENST00000316407 DGKKQ5KSL6 1271 aa9.16□□□□□ -0.94
USF3-201ENST00000316407 MROH9Q5TGP6 573 aa9.16□□□□□ -0.94
USF3-201ENST00000316407 REXO1L1PQ8IX06 675 aa9.16□□□□□ -0.94
USF3-201ENST00000316407 LCORLQ8N3X6 602 aa9.16□□□□□ -0.94
USF3-201ENST00000316407 OXER1Q8TDS5 423 aa9.16□□□□□ -0.94
USF3-201ENST00000316407 CPA5Q8WXQ8 436 aa9.16□□□□□ -0.94
USF3-201ENST00000316407 PUS7LQ9H0K6 701 aaKnown RBP9.16□□□□□ -0.94
USF3-201ENST00000316407 SENP1Q9P0U3 644 aa9.16□□□□□ -0.94
USF3-201ENST00000316407 R3HDM2Q9Y2K5 976 aaKnown RBP9.16□□□□□ -0.94
USF3-201ENST00000316407 FANCAO15360 1455 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms