RNA–Protein interactions for RNA: ENST00000314358.9

KDM3B-201, Transcript of lysine demethylase 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM3B, Length 6,813 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-201ENST00000314358 KRT7P08729 469 aa22.05■■□□□ 1.12
KDM3B-201ENST00000314358 HSPA9P38646 679 aaKnown RBP22.05■■□□□ 1.12
KDM3B-201ENST00000314358 NECTIN1Q15223 517 aa22.05■■□□□ 1.12
KDM3B-201ENST00000314358 ITPRIPL1Q6GPH6 555 aa22.05■■□□□ 1.12
KDM3B-201ENST00000314358 ANKS3Q6ZW76 656 aa22.05■■□□□ 1.12
KDM3B-201ENST00000314358 C6orf203Q9P0P8 240 aaPredicted RBP22.05■■□□□ 1.12
KDM3B-201ENST00000314358 ABCC3O15438 1527 aa22.05■■□□□ 1.12
KDM3B-201ENST00000314358 CDC42BPGQ6DT37 1551 aa22.05■■□□□ 1.12
KDM3B-201ENST00000314358 PHF20L1A8MW92 1017 aa22.05■■□□□ 1.12
KDM3B-201ENST00000314358 SOAT1P35610 550 aa22.05■■□□□ 1.12
KDM3B-201ENST00000314358 PFKFB3Q16875 520 aaPredicted RBP22.05■■□□□ 1.12
KDM3B-201ENST00000314358 EFHBQ8N7U6 833 aa22.05■■□□□ 1.12
KDM3B-201ENST00000314358 TPI1P60174 286 aa22.04■■□□□ 1.12
KDM3B-201ENST00000314358 TMEM62Q0P6H9 643 aa22.04■■□□□ 1.12
KDM3B-201ENST00000314358 DYNC1I2Q13409 638 aaKnown RBP22.04■■□□□ 1.12
KDM3B-201ENST00000314358 ELMSAN1Q6PJG2 1045 aa22.04■■□□□ 1.12
KDM3B-201ENST00000314358 CCDC81Q6ZN84 652 aa22.04■■□□□ 1.12
KDM3B-201ENST00000314358 ZNF280CQ8ND82 737 aa22.04■■□□□ 1.12
KDM3B-201ENST00000314358 ZC3H15Q8WU90 426 aaKnown RBP22.04■■□□□ 1.12
KDM3B-201ENST00000314358 LIMA1Q9UHB6 759 aaKnown RBP22.04■■□□□ 1.12
KDM3B-201ENST00000314358 RASSF10A6NK89 507 aa22.04■■□□□ 1.12
KDM3B-201ENST00000314358 CHN1P15882 459 aa22.04■■□□□ 1.12
KDM3B-201ENST00000314358 CDC27P30260 824 aa22.04■■□□□ 1.12
KDM3B-201ENST00000314358 GPSM2P81274 684 aa22.04■■□□□ 1.12
KDM3B-201ENST00000314358 DHX40Q8IX18 779 aaKnown RBP22.04■■□□□ 1.12
KDM3B-201ENST00000314358 FAM162AQ96A26 154 aa22.04■■□□□ 1.12
KDM3B-201ENST00000314358 C17orf80Q9BSJ5 609 aa22.04■■□□□ 1.12
KDM3B-201ENST00000314358 FAM96AQ9H5X1 160 aa22.04■■□□□ 1.12
KDM3B-201ENST00000314358 PKD2L2Q9NZM6 624 aa22.04■■□□□ 1.12
KDM3B-201ENST00000314358 ADGRF4Q8IZF3 695 aa22.04■■□□□ 1.12
KDM3B-201ENST00000314358 DCAF4Q8WV16 495 aa22.04■■□□□ 1.12
KDM3B-201ENST00000314358 SHCBP1LQ9BZQ2 653 aa22.04■■□□□ 1.12
KDM3B-201ENST00000314358 PLEKHA5Q9HAU0 1116 aa22.04■■□□□ 1.12
KDM3B-201ENST00000314358 RNF146Q9NTX7 359 aa22.04■■□□□ 1.12
KDM3B-201ENST00000314358 EN1Q05925 392 aaPredicted RBP22.04■■□□□ 1.12
KDM3B-201ENST00000314358 CEP78Q5JTW2 689 aa22.04■■□□□ 1.12
KDM3B-201ENST00000314358 SPATA21Q7Z572 469 aa22.04■■□□□ 1.12
KDM3B-201ENST00000314358 MCPH1Q8NEM0 835 aa22.04■■□□□ 1.12
KDM3B-201ENST00000314358 USP6NLQ92738 828 aa22.04■■□□□ 1.12
KDM3B-201ENST00000314358 OLFM3Q96PB7 478 aa22.04■■□□□ 1.12
KDM3B-201ENST00000314358 SRPK1Q96SB4 655 aaKnown RBP22.04■■□□□ 1.12
KDM3B-201ENST00000314358 THTPAQ9BU02 230 aa22.04■■□□□ 1.12
KDM3B-201ENST00000314358 NMT1P30419 496 aaKnown RBP22.04■■□□□ 1.12
KDM3B-201ENST00000314358 ACTR2P61160 394 aa22.04■■□□□ 1.12
KDM3B-201ENST00000314358 STRBPQ96SI9 672 aaKnown RBP22.04■■□□□ 1.12
KDM3B-201ENST00000314358 MMP19Q99542 508 aa22.04■■□□□ 1.12
KDM3B-201ENST00000314358 WNT8AQ9H1J5 351 aa22.04■■□□□ 1.12
KDM3B-201ENST00000314358 GIMAP4Q9NUV9 329 aa22.04■■□□□ 1.12
KDM3B-201ENST00000314358 ZBTB22O15209 634 aa22.03■■□□□ 1.12
KDM3B-201ENST00000314358 CCDC22O60826 627 aa22.03■■□□□ 1.12
KDM3B-201ENST00000314358 SLC16A1P53985 500 aa22.03■■□□□ 1.12
KDM3B-201ENST00000314358 ARHGAP18Q8N392 663 aa22.03■■□□□ 1.12
KDM3B-201ENST00000314358 DONSONQ9NYP3 566 aa22.03■■□□□ 1.12
KDM3B-201ENST00000314358 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.03■■□□□ 1.12
KDM3B-201ENST00000314358 TRIM10Q9UDY6 481 aa22.03■■□□□ 1.12
KDM3B-201ENST00000314358 SUPT3HB4E1H0 165 aa22.03■■□□□ 1.12
KDM3B-201ENST00000314358 CPA2P48052 419 aa22.03■■□□□ 1.12
KDM3B-201ENST00000314358 DDX42Q86XP3 938 aaKnown RBP eCLIP22.03■■□□□ 1.12
KDM3B-201ENST00000314358 SNX31Q8N9S9 440 aa22.03■■□□□ 1.12
KDM3B-201ENST00000314358 PLOD1Q02809 727 aaPredicted RBP22.03■■□□□ 1.12
KDM3B-201ENST00000314358 EIF2AK1Q9BQI3 630 aaKnown RBP22.03■■□□□ 1.12
KDM3B-201ENST00000314358 MRPL4Q9BYD3 311 aaKnown RBP22.03■■□□□ 1.12
KDM3B-201ENST00000314358 PARVAQ9NVD7 372 aa22.03■■□□□ 1.12
KDM3B-201ENST00000314358 UPP2O95045 317 aa22.03■■□□□ 1.12
KDM3B-201ENST00000314358 PDGFRBP09619 1106 aa22.03■■□□□ 1.12
KDM3B-201ENST00000314358 TRMT2AQ8IZ69 625 aaKnown RBP22.03■■□□□ 1.12
KDM3B-201ENST00000314358 RIN3Q8TB24 985 aa22.03■■□□□ 1.12
KDM3B-201ENST00000314358 OTUD5Q96G74 571 aa22.03■■□□□ 1.12
KDM3B-201ENST00000314358 OSBPL10Q9BXB5 764 aa22.03■■□□□ 1.12
KDM3B-201ENST00000314358 IRX2Q9BZI1 471 aaPredicted RBP22.03■■□□□ 1.12
KDM3B-201ENST00000314358 EPB42P16452 691 aa22.03■■□□□ 1.12
KDM3B-201ENST00000314358 NBPF9Q3BBW0 867 aa22.03■■□□□ 1.12
KDM3B-201ENST00000314358 PGBD3Q8N328 593 aa22.03■■□□□ 1.12
KDM3B-201ENST00000314358 ENAHQ8N8S7 591 aaPredicted RBP22.03■■□□□ 1.12
KDM3B-201ENST00000314358 RNPC3Q96LT9 517 aaKnown RBP22.03■■□□□ 1.12
KDM3B-201ENST00000314358 SLC9A1P19634 815 aa22.03■■□□□ 1.12
KDM3B-201ENST00000314358 KRT87PA6NCN2 255 aa22.02■■□□□ 1.12
KDM3B-201ENST00000314358 ZNF197O14709 1029 aa22.02■■□□□ 1.12
KDM3B-201ENST00000314358 CAPZA2P47755 286 aa22.02■■□□□ 1.12
KDM3B-201ENST00000314358 TASP1Q9H6P5 420 aa22.02■■□□□ 1.12
KDM3B-201ENST00000314358 SH3GLB2Q9NR46 395 aa22.02■■□□□ 1.12
KDM3B-201ENST00000314358 PNMA3Q9UL41 463 aa22.02■■□□□ 1.12
KDM3B-201ENST00000314358 TBXAS1P24557 533 aaPredicted RBP22.02■■□□□ 1.12
KDM3B-201ENST00000314358 LIFRP42702 1097 aa22.02■■□□□ 1.12
KDM3B-201ENST00000314358 TMEM154Q6P9G4 183 aa22.02■■□□□ 1.12
KDM3B-201ENST00000314358 IYDQ6PHW0 289 aa22.02■■□□□ 1.12
KDM3B-201ENST00000314358 DDX56Q9NY93 547 aaKnown RBP22.02■■□□□ 1.12
KDM3B-201ENST00000314358 LOC102724159A0A0B4J2E5 919 aa22.02■■□□□ 1.12
KDM3B-201ENST00000314358 INPP5AQ14642 412 aa22.02■■□□□ 1.12
KDM3B-201ENST00000314358 PWP2Q15269 919 aaKnown RBP22.02■■□□□ 1.12
KDM3B-201ENST00000314358 EME1Q96AY2 570 aa22.02■■□□□ 1.12
KDM3B-201ENST00000314358 AGO2Q9UKV8 859 aaKnown RBP22.02■■□□□ 1.12
KDM3B-201ENST00000314358 POLRMTO00411 1230 aaKnown RBP22.02■■□□□ 1.12
KDM3B-201ENST00000314358 AP3B2Q13367 1082 aa22.02■■□□□ 1.12
KDM3B-201ENST00000314358 APOL5Q9BWW9 433 aa22.02■■□□□ 1.12
KDM3B-201ENST00000314358 TSSK1BQ9BXA7 367 aa22.02■■□□□ 1.12
KDM3B-201ENST00000314358 XPO7Q9UIA9 1087 aaKnown RBP22.02■■□□□ 1.12
KDM3B-201ENST00000314358 FAM32AQ9Y421 112 aaKnown RBP22.02■■□□□ 1.12
KDM3B-201ENST00000314358 TBC1D4O60343 1298 aa22.02■■□□□ 1.11
KDM3B-201ENST00000314358 ETFBP38117 255 aa22.02■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms