RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 GPC5P78333 572 aa13.33□□□□□ -0.28
RNF4-201ENST00000314289 PPARDQ03181 441 aa13.33□□□□□ -0.28
RNF4-201ENST00000314289 ZNF394Q53GI3 561 aa13.33□□□□□ -0.28
RNF4-201ENST00000314289 USP37Q86T82 979 aa13.33□□□□□ -0.28
RNF4-201ENST00000314289 SYCE1Q8N0S2 351 aa13.33□□□□□ -0.28
RNF4-201ENST00000314289 AENQ8WTP8 325 aaKnown RBP13.33□□□□□ -0.28
RNF4-201ENST00000314289 CASKIN2Q8WXE0 1202 aa13.33□□□□□ -0.28
RNF4-201ENST00000314289 INO80BQ9C086 356 aaPredicted RBP13.33□□□□□ -0.28
RNF4-201ENST00000314289 ISCUQ9H1K1 167 aa13.33□□□□□ -0.28
RNF4-201ENST00000314289 GOLGA6AQ9NYA3 693 aa13.33□□□□□ -0.28
RNF4-201ENST00000314289 SUCLA2Q9P2R7 463 aaPredicted RBP13.33□□□□□ -0.28
RNF4-201ENST00000314289 NCANO14594 1321 aa13.33□□□□□ -0.28
RNF4-201ENST00000314289 A0A0B4J269 797 aa13.32□□□□□ -0.28
RNF4-201ENST00000314289 DDX3YO15523 660 aaKnown RBP13.32□□□□□ -0.28
RNF4-201ENST00000314289 SART1O43290 800 aaKnown RBP13.32□□□□□ -0.28
RNF4-201ENST00000314289 CST3P01034 146 aaPredicted RBP13.32□□□□□ -0.28
RNF4-201ENST00000314289 C4BPAP04003 597 aaKnown RBP13.32□□□□□ -0.28
RNF4-201ENST00000314289 MCM3P25205 808 aa13.32□□□□□ -0.28
RNF4-201ENST00000314289 LIG3P49916 1009 aa13.32□□□□□ -0.28
RNF4-201ENST00000314289 PLCB4Q15147 1175 aa13.32□□□□□ -0.28
RNF4-201ENST00000314289 ZACNQ401N2 412 aa13.32□□□□□ -0.28
RNF4-201ENST00000314289 FASTKD5Q7L8L6 764 aaKnown RBP13.32□□□□□ -0.28
RNF4-201ENST00000314289 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.32□□□□□ -0.287e-7■■■□□ 16.9
RNF4-201ENST00000314289 NUP85Q9BW27 656 aa13.32□□□□□ -0.28
RNF4-201ENST00000314289 DNAJC25-GNG10A0A024R161 153 aa13.32□□□□□ -0.28
RNF4-201ENST00000314289 GOLGA6BA6NDN3 693 aa13.32□□□□□ -0.28
RNF4-201ENST00000314289 PDHXO00330 501 aa13.32□□□□□ -0.28
RNF4-201ENST00000314289 RTN2O75298 545 aa13.32□□□□□ -0.28
RNF4-201ENST00000314289 ZNF286BP0CG31 522 aa13.32□□□□□ -0.28
RNF4-201ENST00000314289 COMTP21964 271 aa13.32□□□□□ -0.28
RNF4-201ENST00000314289 SNAPC2Q13487 334 aa13.32□□□□□ -0.28
RNF4-201ENST00000314289 PSMD6Q15008 389 aa13.32□□□□□ -0.28
RNF4-201ENST00000314289 WDR44Q5JSH3 913 aa13.32□□□□□ -0.28
RNF4-201ENST00000314289 TMEM270Q6UE05 265 aa13.32□□□□□ -0.28
RNF4-201ENST00000314289 ARMCX2Q7L311 632 aa13.32□□□□□ -0.28
RNF4-201ENST00000314289 DDX1Q92499 740 aaKnown RBP13.32□□□□□ -0.28
RNF4-201ENST00000314289 PBKQ96KB5 322 aa13.32□□□□□ -0.28
RNF4-201ENST00000314289 MINDY3Q9H8M7 445 aa13.32□□□□□ -0.28
RNF4-201ENST00000314289 RNF14Q9UBS8 474 aa13.32□□□□□ -0.28
RNF4-201ENST00000314289 CD58P19256 250 aa13.31□□□□□ -0.28
RNF4-201ENST00000314289 CDR2Q01850 454 aa13.31□□□□□ -0.28
RNF4-201ENST00000314289 HLTFQ14527 1009 aaKnown RBP eCLIP13.31□□□□□ -0.28
RNF4-201ENST00000314289 TADA2BQ86TJ2 420 aa13.31□□□□□ -0.28
RNF4-201ENST00000314289 RNPC3Q96LT9 517 aaKnown RBP13.31□□□□□ -0.28
RNF4-201ENST00000314289 MTMR12Q9C0I1 747 aa13.31□□□□□ -0.28
RNF4-201ENST00000314289 ERVK-5Q9HDB9 667 aa13.31□□□□□ -0.28
RNF4-201ENST00000314289 NUB1Q9Y5A7 615 aa13.31□□□□□ -0.28
RNF4-201ENST00000314289 ZC3H4Q9UPT8 1303 aaKnown RBP13.31□□□□□ -0.28
RNF4-201ENST00000314289 A0A0G2JMZ2 1700 aa13.31□□□□□ -0.28
RNF4-201ENST00000314289 GLTPD2A6NH11 291 aa13.31□□□□□ -0.28
RNF4-201ENST00000314289 H0YCG3 227 aa13.31□□□□□ -0.28
RNF4-201ENST00000314289 MSCO60682 206 aa13.31□□□□□ -0.28
RNF4-201ENST00000314289 ADORA2AP29274 412 aa13.31□□□□□ -0.28
RNF4-201ENST00000314289 RFC5P40937 340 aa13.31□□□□□ -0.28
RNF4-201ENST00000314289 CCDC62Q6P9F0 684 aa13.31□□□□□ -0.28
RNF4-201ENST00000314289 C15orf39Q6ZRI6 1047 aa13.31□□□□□ -0.28
RNF4-201ENST00000314289 EFCAB13Q8IY85 973 aa13.31□□□□□ -0.28
RNF4-201ENST00000314289 TMEM192Q8IY95 271 aa13.31□□□□□ -0.28
RNF4-201ENST00000314289 AGPSO00116 658 aa13.31□□□□□ -0.28
RNF4-201ENST00000314289 TTI1O43156 1089 aa13.31□□□□□ -0.28
RNF4-201ENST00000314289 GRIN3BO60391 1043 aa13.31□□□□□ -0.28
RNF4-201ENST00000314289 GJB6O95452 261 aa13.31□□□□□ -0.28
RNF4-201ENST00000314289 ADCYAP1R1P41586 468 aa13.31□□□□□ -0.28
RNF4-201ENST00000314289 TNNC1P63316 161 aa13.31□□□□□ -0.28
RNF4-201ENST00000314289 EFCAB12Q6NXP0 572 aa13.31□□□□□ -0.28
RNF4-201ENST00000314289 SCARA5Q6ZMJ2 495 aa13.31□□□□□ -0.28
RNF4-201ENST00000314289 ZNF564Q8TBZ8 553 aaPredicted RBP13.31□□□□□ -0.28
RNF4-201ENST00000314289 ACTRT1Q8TDG2 376 aa13.31□□□□□ -0.28
RNF4-201ENST00000314289 SCFD2Q8WU76 684 aa13.31□□□□□ -0.28
RNF4-201ENST00000314289 CYFIP2Q96F07 1278 aa13.31□□□□□ -0.28
RNF4-201ENST00000314289 L3MBTL3Q96JM7 780 aaPredicted RBP13.31□□□□□ -0.28
RNF4-201ENST00000314289 DPH5Q9H2P9 285 aa13.31□□□□□ -0.28
RNF4-201ENST00000314289 TMEM59LQ9UK28 342 aa13.31□□□□□ -0.28
RNF4-201ENST00000314289 PCDHB4Q9Y5E5 795 aa13.31□□□□□ -0.28
RNF4-201ENST00000314289 LOC285556D6RIA3 1793 aa13.3□□□□□ -0.28
RNF4-201ENST00000314289 CNTNAP2Q9UHC6 1331 aa13.3□□□□□ -0.28
RNF4-201ENST00000314289 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.3□□□□□ -0.28
RNF4-201ENST00000314289 PRKCBP05771 671 aa13.3□□□□□ -0.28
RNF4-201ENST00000314289 IQCF3P0C7M6 154 aa13.3□□□□□ -0.28
RNF4-201ENST00000314289 IFT20Q8IY31 132 aa13.3□□□□□ -0.28
RNF4-201ENST00000314289 ATP8B4Q8TF62 1192 aa13.3□□□□□ -0.28
RNF4-201ENST00000314289 CNOT8Q9UFF9 292 aaKnown RBP13.3□□□□□ -0.28
RNF4-201ENST00000314289 STYXL1Q9Y6J8 313 aa13.3□□□□□ -0.28
RNF4-201ENST00000314289 ADGRA2Q96PE1 1338 aa13.3□□□□□ -0.28
RNF4-201ENST00000314289 CCL15-CCL14A0A0B4J2E2 113 aa13.3□□□□□ -0.28
RNF4-201ENST00000314289 BTBD19C9JJ37 291 aa13.3□□□□□ -0.28
RNF4-201ENST00000314289 PMM2O15305 246 aa13.3□□□□□ -0.28
RNF4-201ENST00000314289 TFAMQ00059 246 aaKnown RBP13.3□□□□□ -0.28
RNF4-201ENST00000314289 CCL15Q16663 113 aa13.3□□□□□ -0.28
RNF4-201ENST00000314289 EEF1DP3Q658K8 133 aa13.3□□□□□ -0.28
RNF4-201ENST00000314289 SLFN12LQ6IEE8 588 aa13.3□□□□□ -0.28
RNF4-201ENST00000314289 FMNL3Q8IVF7 1028 aa13.3□□□□□ -0.28
RNF4-201ENST00000314289 ZC3H15Q8WU90 426 aaKnown RBP13.3□□□□□ -0.28
RNF4-201ENST00000314289 TRIM51Q9BSJ1 452 aa13.3□□□□□ -0.28
RNF4-201ENST00000314289 TCRBV7S2A1N4TA0A589 114 aa13.29□□□□□ -0.28
RNF4-201ENST00000314289 SPOPO43791 374 aa13.29□□□□□ -0.28
RNF4-201ENST00000314289 GTF2H1P32780 548 aa13.29□□□□□ -0.28
RNF4-201ENST00000314289 NOP14P78316 857 aaKnown RBP13.29□□□□□ -0.28
RNF4-201ENST00000314289 NCOA4Q13772 614 aa13.29□□□□□ -0.28
RNF4-201ENST00000314289 MAPK6Q16659 721 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms