RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 SKOR1P84550 965 aa12.35□□□□□ -0.43
PTPN2-201ENST00000309660 LRRC71Q8N4P6 559 aa12.35□□□□□ -0.43
PTPN2-201ENST00000309660 MDM1Q8TC05 714 aa12.35□□□□□ -0.43
PTPN2-201ENST00000309660 BBXQ8WY36 941 aaPredicted RBP12.35□□□□□ -0.43
PTPN2-201ENST00000309660 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.35□□□□□ -0.43
PTPN2-201ENST00000309660 RPS6KC1Q96S38 1066 aa12.35□□□□□ -0.43
PTPN2-201ENST00000309660 SEMA4AQ9H3S1 761 aa12.35□□□□□ -0.43
PTPN2-201ENST00000309660 GINM1Q9NU53 330 aa12.35□□□□□ -0.43
PTPN2-201ENST00000309660 MTRF1LQ9UGC7 380 aaKnown RBP12.35□□□□□ -0.43
PTPN2-201ENST00000309660 COQ4Q9Y3A0 265 aa12.35□□□□□ -0.43
PTPN2-201ENST00000309660 FAM169AQ9Y6X4 670 aa12.35□□□□□ -0.43
PTPN2-201ENST00000309660 UMODL1Q5DID0 1318 aa12.34□□□□□ -0.43
PTPN2-201ENST00000309660 H0YGN5 161 aa12.34□□□□□ -0.43
PTPN2-201ENST00000309660 THAP12O43422 761 aa12.34□□□□□ -0.43
PTPN2-201ENST00000309660 GARTP22102 1010 aa12.34□□□□□ -0.43
PTPN2-201ENST00000309660 DHX34Q14147 1143 aaKnown RBP12.34□□□□□ -0.43
PTPN2-201ENST00000309660 SLC29A2Q14542 456 aa12.34□□□□□ -0.43
PTPN2-201ENST00000309660 PPP2R5EQ16537 467 aa12.34□□□□□ -0.43
PTPN2-201ENST00000309660 CLEC16AQ2KHT3 1053 aa12.34□□□□□ -0.43
PTPN2-201ENST00000309660 RNF187Q5TA31 235 aaPredicted RBP12.34□□□□□ -0.43
PTPN2-201ENST00000309660 CD302Q8IX05 232 aa12.34□□□□□ -0.43
PTPN2-201ENST00000309660 MICALL1Q8N3F8 863 aa12.34□□□□□ -0.43
PTPN2-201ENST00000309660 ARFGAP2Q8N6H7 521 aa12.34□□□□□ -0.43
PTPN2-201ENST00000309660 OR5B17Q8NGF7 314 aa12.34□□□□□ -0.43
PTPN2-201ENST00000309660 FBXL18Q96ME1 805 aa12.34□□□□□ -0.43
PTPN2-201ENST00000309660 NFS1Q9Y697 457 aa12.34□□□□□ -0.43
PTPN2-201ENST00000309660 PSME4Q14997 1843 aa12.34□□□□□ -0.43
PTPN2-201ENST00000309660 O00370 1275 aa12.34□□□□□ -0.43
PTPN2-201ENST00000309660 CAND2O75155 1236 aa12.34□□□□□ -0.43
PTPN2-201ENST00000309660 PGK2P07205 417 aa12.34□□□□□ -0.43
PTPN2-201ENST00000309660 CALCOCO2Q13137 446 aa12.34□□□□□ -0.43
PTPN2-201ENST00000309660 TTLL12Q14166 644 aaPredicted RBP12.34□□□□□ -0.43
PTPN2-201ENST00000309660 SCARA5Q6ZMJ2 495 aa12.34□□□□□ -0.43
PTPN2-201ENST00000309660 DDX1Q92499 740 aaKnown RBP12.34□□□□□ -0.43
PTPN2-201ENST00000309660 OTUD5Q96G74 571 aa12.34□□□□□ -0.43
PTPN2-201ENST00000309660 PPP1R16BQ96T49 567 aa12.34□□□□□ -0.43
PTPN2-201ENST00000309660 UVRAGQ9P2Y5 699 aa12.34□□□□□ -0.43
PTPN2-201ENST00000309660 DOCK5Q9H7D0 1870 aa12.34□□□□□ -0.43
PTPN2-201ENST00000309660 KIF13BQ9NQT8 1826 aa12.34□□□□□ -0.43
PTPN2-201ENST00000309660 FAM187AA6NFU0 413 aa12.34□□□□□ -0.43
PTPN2-201ENST00000309660 TTLL13PA6NNM8 815 aa12.34□□□□□ -0.43
PTPN2-201ENST00000309660 GGPS1O95749 300 aa12.34□□□□□ -0.43
PTPN2-201ENST00000309660 CYP1A2P05177 515 aa12.34□□□□□ -0.43
PTPN2-201ENST00000309660 UBA1P22314 1058 aaKnown RBP12.34□□□□□ -0.43
PTPN2-201ENST00000309660 GNA15P30679 374 aa12.34□□□□□ -0.43
PTPN2-201ENST00000309660 VGLL4Q14135 290 aa12.34□□□□□ -0.43
PTPN2-201ENST00000309660 LY6KQ17RY6 165 aa12.34□□□□□ -0.43
PTPN2-201ENST00000309660 LRIG3Q6UXM1 1119 aa12.34□□□□□ -0.43
PTPN2-201ENST00000309660 ZBTB10Q96DT7 871 aa12.34□□□□□ -0.43
PTPN2-201ENST00000309660 HAPLN2Q9GZV7 340 aa12.34□□□□□ -0.43
PTPN2-201ENST00000309660 ADAM22Q9P0K1 906 aa12.34□□□□□ -0.43
PTPN2-201ENST00000309660 PCDHB2Q9Y5E7 798 aa12.34□□□□□ -0.43
PTPN2-201ENST00000309660 ECEL1O95672 775 aa12.33□□□□□ -0.44
PTPN2-201ENST00000309660 COILP38432 576 aaPredicted RBP12.33□□□□□ -0.44
PTPN2-201ENST00000309660 HIRAP54198 1017 aaPredicted RBP12.33□□□□□ -0.44
PTPN2-201ENST00000309660 KAZNQ674X7 775 aa12.33□□□□□ -0.44
PTPN2-201ENST00000309660 MMS22LQ6ZRQ5 1243 aa12.33□□□□□ -0.44
PTPN2-201ENST00000309660 NLGN2Q8NFZ4 835 aa12.33□□□□□ -0.44
PTPN2-201ENST00000309660 PSPC1Q8WXF1 523 aaKnown RBP12.33□□□□□ -0.44
PTPN2-201ENST00000309660 SENP7Q9BQF6 1050 aa12.33□□□□□ -0.44
PTPN2-201ENST00000309660 PLVAPQ9BX97 442 aa12.33□□□□□ -0.44
PTPN2-201ENST00000309660 IMPG2Q9BZV3 1241 aa12.33□□□□□ -0.44
PTPN2-201ENST00000309660 R3HDMLQ9H3Y0 253 aa12.33□□□□□ -0.44
PTPN2-201ENST00000309660 PCDHA3Q9Y5H8 950 aa12.33□□□□□ -0.44
PTPN2-201ENST00000309660 FZD9O00144 591 aa12.33□□□□□ -0.44
PTPN2-201ENST00000309660 TULP2O00295 520 aa12.33□□□□□ -0.44
PTPN2-201ENST00000309660 KIAA0754O94854 1291 aa12.33□□□□□ -0.44
PTPN2-201ENST00000309660 ACSL3O95573 720 aa12.33□□□□□ -0.44
PTPN2-201ENST00000309660 TNFSF9P41273 254 aa12.33□□□□□ -0.44
PTPN2-201ENST00000309660 STAT5BP51692 787 aa12.33□□□□□ -0.44
PTPN2-201ENST00000309660 OAZ1P54368 228 aa12.33□□□□□ -0.44
PTPN2-201ENST00000309660 IRX3P78415 501 aaPredicted RBP12.33□□□□□ -0.44
PTPN2-201ENST00000309660 GCNT1Q02742 428 aa12.33□□□□□ -0.44
PTPN2-201ENST00000309660 PTGISQ16647 500 aa12.33□□□□□ -0.44
PTPN2-201ENST00000309660 ZACNQ401N2 412 aa12.33□□□□□ -0.44
PTPN2-201ENST00000309660 CCDC38Q502W7 563 aa12.33□□□□□ -0.44
PTPN2-201ENST00000309660 MCOLN2Q8IZK6 566 aa12.33□□□□□ -0.44
PTPN2-201ENST00000309660 APOBEC3GQ9HC16 384 aaKnown RBP12.33□□□□□ -0.44
PTPN2-201ENST00000309660 CHST7Q9NS84 486 aa12.33□□□□□ -0.44
PTPN2-201ENST00000309660 BTBD7Q9P203 1132 aa12.33□□□□□ -0.44
PTPN2-201ENST00000309660 PASKQ96RG2 1323 aa12.33□□□□□ -0.44
PTPN2-201ENST00000309660 H0YCG3 227 aa12.32□□□□□ -0.44
PTPN2-201ENST00000309660 NOP56O00567 594 aaKnown RBP12.32□□□□□ -0.44
PTPN2-201ENST00000309660 GRIN3BO60391 1043 aa12.32□□□□□ -0.44
PTPN2-201ENST00000309660 EDN1P05305 212 aa12.32□□□□□ -0.44
PTPN2-201ENST00000309660 HSPA6P17066 643 aa12.32□□□□□ -0.44
PTPN2-201ENST00000309660 TCF7P36402 384 aaPredicted RBP12.32□□□□□ -0.44
PTPN2-201ENST00000309660 HADHBP55084 474 aaKnown RBP12.32□□□□□ -0.44
PTPN2-201ENST00000309660 NOP14P78316 857 aaKnown RBP12.32□□□□□ -0.44
PTPN2-201ENST00000309660 KRT17Q04695 432 aa12.32□□□□□ -0.44
PTPN2-201ENST00000309660 ZDHHC24Q6UX98 284 aa12.32□□□□□ -0.44
PTPN2-201ENST00000309660 EIF1ADQ8N9N8 165 aaKnown RBP12.32□□□□□ -0.44
PTPN2-201ENST00000309660 CCT8L2Q96SF2 557 aa12.32□□□□□ -0.44
PTPN2-201ENST00000309660 PORCNQ9H237 461 aa12.32□□□□□ -0.44
PTPN2-201ENST00000309660 AZI2Q9H6S1 392 aa12.32□□□□□ -0.44
PTPN2-201ENST00000309660 ZDHHC18Q9NUE0 388 aa12.32□□□□□ -0.44
PTPN2-201ENST00000309660 ZNF112Q9UJU3 913 aa12.32□□□□□ -0.44
PTPN2-201ENST00000309660 PI4K2BG5E9Z4 385 aa12.32□□□□□ -0.44
PTPN2-201ENST00000309660 ATP2C2O75185 946 aa12.32□□□□□ -0.44
PTPN2-201ENST00000309660 GJB1P08034 283 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms