RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 DCLRE1AQ6PJP8 1040 aa21.69■■□□□ 1.06
PDZRN3-202ENST00000308537 DNAJC19Q96DA6 116 aa21.69■■□□□ 1.06
PDZRN3-202ENST00000308537 ACAP3Q96P50 834 aa21.69■■□□□ 1.06
PDZRN3-202ENST00000308537 TOPORSQ9NS56 1045 aaPredicted RBP21.69■■□□□ 1.06
PDZRN3-202ENST00000308537 ANKFY1Q9P2R3 1169 aa21.69■■□□□ 1.06
PDZRN3-202ENST00000308537 TBX20Q9UMR3 447 aa21.69■■□□□ 1.06
PDZRN3-202ENST00000308537 WDFY4Q6ZS81 3184 aa21.69■■□□□ 1.06
PDZRN3-202ENST00000308537 TRAK2O60296 914 aa21.68■■□□□ 1.06
PDZRN3-202ENST00000308537 SPATA31D3P0C874 917 aa21.68■■□□□ 1.06
PDZRN3-202ENST00000308537 ZXDAP98168 799 aa21.68■■□□□ 1.06
PDZRN3-202ENST00000308537 GTF2BQ00403 316 aa21.68■■□□□ 1.06
PDZRN3-202ENST00000308537 ZBTB41Q5SVQ8 909 aa21.68■■□□□ 1.06
PDZRN3-202ENST00000308537 RSPO2Q6UXX9 243 aaPredicted RBP21.68■■□□□ 1.06
PDZRN3-202ENST00000308537 SPATA31D4Q6ZUB0 917 aa21.68■■□□□ 1.06
PDZRN3-202ENST00000308537 PALB2Q86YC2 1186 aa21.68■■□□□ 1.06
PDZRN3-202ENST00000308537 LINC00301Q8NCQ3 95 aa21.68■■□□□ 1.06
PDZRN3-202ENST00000308537 HDAC7Q8WUI4 952 aa21.68■■□□□ 1.06
PDZRN3-202ENST00000308537 C18orf25Q96B23 403 aaPredicted RBP21.68■■□□□ 1.06
PDZRN3-202ENST00000308537 UROC1Q96N76 676 aa21.68■■□□□ 1.06
PDZRN3-202ENST00000308537 TCHPQ9BT92 498 aa21.68■■□□□ 1.06
PDZRN3-202ENST00000308537 STK17AQ9UEE5 414 aa21.68■■□□□ 1.06
PDZRN3-202ENST00000308537 USTQ9Y2C2 406 aa21.68■■□□□ 1.06
PDZRN3-202ENST00000308537 NOTCH4Q99466 2003 aa21.68■■□□□ 1.06
PDZRN3-202ENST00000308537 TTC26A0AVF1 554 aa21.67■■□□□ 1.06
PDZRN3-202ENST00000308537 MYMKA6NI61 221 aa21.67■■□□□ 1.06
PDZRN3-202ENST00000308537 N4BP1O75113 896 aaKnown RBP21.67■■□□□ 1.06
PDZRN3-202ENST00000308537 PPP1R37O75864 691 aa21.67■■□□□ 1.06
PDZRN3-202ENST00000308537 B3GAT3O94766 335 aa21.67■■□□□ 1.06
PDZRN3-202ENST00000308537 FAM13AO94988 1023 aa21.67■■□□□ 1.06
PDZRN3-202ENST00000308537 ADRB2P07550 413 aa21.67■■□□□ 1.06
PDZRN3-202ENST00000308537 MYBP10242 640 aa21.67■■□□□ 1.06
PDZRN3-202ENST00000308537 HARSP12081 509 aaKnown RBP21.67■■□□□ 1.06
PDZRN3-202ENST00000308537 NMT1P30419 496 aaKnown RBP21.67■■□□□ 1.06
PDZRN3-202ENST00000308537 TNFSF9P41273 254 aa21.67■■□□□ 1.06
PDZRN3-202ENST00000308537 BRCC3P46736 316 aa21.67■■□□□ 1.06
PDZRN3-202ENST00000308537 YARSP54577 528 aaKnown RBP21.67■■□□□ 1.06
PDZRN3-202ENST00000308537 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.67■■□□□ 1.06
PDZRN3-202ENST00000308537 HFE2Q6ZVN8 426 aa21.67■■□□□ 1.06
PDZRN3-202ENST00000308537 MAP4K3Q8IVH8 894 aa21.67■■□□□ 1.06
PDZRN3-202ENST00000308537 GLYCTKQ8IVS8 523 aa21.67■■□□□ 1.06
PDZRN3-202ENST00000308537 MYCT1Q8N699 235 aa21.67■■□□□ 1.06
PDZRN3-202ENST00000308537 STRA6Q9BX79 667 aa21.67■■□□□ 1.06
PDZRN3-202ENST00000308537 ST6GALNAC4Q9H4F1 302 aa21.67■■□□□ 1.06
PDZRN3-202ENST00000308537 FBXW11Q9UKB1 542 aa21.67■■□□□ 1.06
PDZRN3-202ENST00000308537 H0YCG3 227 aa21.66■■□□□ 1.06
PDZRN3-202ENST00000308537 I3L4J1 428 aa21.66■■□□□ 1.06
PDZRN3-202ENST00000308537 K7ENM7 598 aa21.66■■□□□ 1.06
PDZRN3-202ENST00000308537 CLDN3O15551 220 aa21.66■■□□□ 1.06
PDZRN3-202ENST00000308537 CXCL8P10145 99 aa21.66■■□□□ 1.06
PDZRN3-202ENST00000308537 ELAVL2Q12926 359 aaKnown RBP21.66■■□□□ 1.06
PDZRN3-202ENST00000308537 ZBTB6Q15916 424 aa21.66■■□□□ 1.06
PDZRN3-202ENST00000308537 PSMD5Q16401 504 aa21.66■■□□□ 1.06
PDZRN3-202ENST00000308537 PTPN21Q16825 1174 aa21.66■■□□□ 1.06
PDZRN3-202ENST00000308537 TRIM67Q6ZTA4 783 aa21.66■■□□□ 1.06
PDZRN3-202ENST00000308537 ZDHHC14Q8IZN3 488 aa21.66■■□□□ 1.06
PDZRN3-202ENST00000308537 DDX27Q96GQ7 796 aaKnown RBP21.66■■□□□ 1.06
PDZRN3-202ENST00000308537 IKZF4Q9H2S9 585 aa21.66■■□□□ 1.06
PDZRN3-202ENST00000308537 PLEKHA4Q9H4M7 779 aa21.66■■□□□ 1.06
PDZRN3-202ENST00000308537 MTRRQ9UBK8 725 aa21.66■■□□□ 1.06
PDZRN3-202ENST00000308537 NR2E1Q9Y466 385 aa21.66■■□□□ 1.06
PDZRN3-202ENST00000308537 TISP43B9A030 160 aa21.65■■□□□ 1.06
PDZRN3-202ENST00000308537 SCP2P22307 547 aa21.65■■□□□ 1.06
PDZRN3-202ENST00000308537 TKTP29401 623 aaKnown RBP21.65■■□□□ 1.06
PDZRN3-202ENST00000308537 CREMQ03060 361 aa21.65■■□□□ 1.06
PDZRN3-202ENST00000308537 PKP1Q13835 747 aa21.65■■□□□ 1.06
PDZRN3-202ENST00000308537 ZC2HC1CQ53FD0 456 aaPredicted RBP21.65■■□□□ 1.06
PDZRN3-202ENST00000308537 KRI1Q8N9T8 703 aaKnown RBP21.65■■□□□ 1.06
PDZRN3-202ENST00000308537 RASSF8Q8NHQ8 419 aa21.65■■□□□ 1.06
PDZRN3-202ENST00000308537 ASIC4Q96FT7 647 aa21.65■■□□□ 1.06
PDZRN3-202ENST00000308537 TSHZ2Q9NRE2 1034 aa21.65■■□□□ 1.06
PDZRN3-202ENST00000308537 SLC38A7Q9NVC3 462 aa21.65■■□□□ 1.06
PDZRN3-202ENST00000308537 TUBGCP4Q9UGJ1 667 aa21.65■■□□□ 1.06
PDZRN3-202ENST00000308537 A0A0B4J269 797 aa21.64■■□□□ 1.05
PDZRN3-202ENST00000308537 CCDC195A0A1B0GUA6 201 aa21.64■■□□□ 1.05
PDZRN3-202ENST00000308537 FRMD3A2A2Y4 597 aa21.64■■□□□ 1.05
PDZRN3-202ENST00000308537 ANKRD63C9JTQ0 380 aa21.64■■□□□ 1.05
PDZRN3-202ENST00000308537 PODXLO00592 558 aa21.64■■□□□ 1.05
PDZRN3-202ENST00000308537 TBC1D4O60343 1298 aa21.64■■□□□ 1.05
PDZRN3-202ENST00000308537 ENOX2Q16206 610 aaKnown RBP21.64■■□□□ 1.05
PDZRN3-202ENST00000308537 DYMQ7RTS9 669 aa21.64■■□□□ 1.05
PDZRN3-202ENST00000308537 ZNF720Q7Z2F6 126 aa21.64■■□□□ 1.05
PDZRN3-202ENST00000308537 BMP8AQ7Z5Y6 402 aa21.64■■□□□ 1.05
PDZRN3-202ENST00000308537 SFR1Q86XK3 245 aa21.64■■□□□ 1.05
PDZRN3-202ENST00000308537 CEP57Q86XR8 500 aa21.64■■□□□ 1.05
PDZRN3-202ENST00000308537 KREMEN2Q8NCW0 462 aa21.64■■□□□ 1.05
PDZRN3-202ENST00000308537 DDX12PQ92771 950 aa21.64■■□□□ 1.05
PDZRN3-202ENST00000308537 SMOC2Q9H3U7 446 aa21.64■■□□□ 1.05
PDZRN3-202ENST00000308537 WDR6Q9NNW5 1121 aaKnown RBP21.64■■□□□ 1.05
PDZRN3-202ENST00000308537 CCDC39Q9UFE4 941 aa21.64■■□□□ 1.05
PDZRN3-202ENST00000308537 STYXL1Q9Y6J8 313 aa21.64■■□□□ 1.05
PDZRN3-202ENST00000308537 KMT2EQ8IZD2 1858 aa21.64■■□□□ 1.05
PDZRN3-202ENST00000308537 HNRNPDLO14979 420 aaKnown RBP21.63■■□□□ 1.05
PDZRN3-202ENST00000308537 TBCAO75347 108 aaKnown RBP21.63■■□□□ 1.05
PDZRN3-202ENST00000308537 ZMYND10O75800 440 aa21.63■■□□□ 1.05
PDZRN3-202ENST00000308537 CLTAP09496 248 aa21.63■■□□□ 1.05
PDZRN3-202ENST00000308537 RAB33AQ14088 237 aa21.63■■□□□ 1.05
PDZRN3-202ENST00000308537 E2F4Q16254 413 aa21.63■■□□□ 1.05
PDZRN3-202ENST00000308537 RRAGBQ5VZM2 374 aa21.63■■□□□ 1.05
PDZRN3-202ENST00000308537 CYP26C1Q6V0L0 522 aa21.63■■□□□ 1.05
PDZRN3-202ENST00000308537 CCDC149Q6ZUS6 474 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms