RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 FIZ1Q96SL8 496 aa11.05□□□□□ -0.64
APOBEC3F-201ENST00000308521 GOLPH3Q9H4A6 298 aa11.05□□□□□ -0.64
APOBEC3F-201ENST00000308521 FBXO40Q9UH90 709 aa11.05□□□□□ -0.64
APOBEC3F-201ENST00000308521 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.05□□□□□ -0.64
APOBEC3F-201ENST00000308521 LCTP09848 1927 aa11.05□□□□□ -0.64
APOBEC3F-201ENST00000308521 NCANO14594 1321 aa11.05□□□□□ -0.64
APOBEC3F-201ENST00000308521 FAM187AA6NFU0 413 aa11.05□□□□□ -0.64
APOBEC3F-201ENST00000308521 DCDC2CA8MYV0 355 aa11.05□□□□□ -0.64
APOBEC3F-201ENST00000308521 TISP43B9A030 160 aa11.05□□□□□ -0.64
APOBEC3F-201ENST00000308521 SMNDC1O75940 238 aaKnown RBP eCLIP11.05□□□□□ -0.64
APOBEC3F-201ENST00000308521 LUC7L3O95232 432 aaKnown RBP11.05□□□□□ -0.64
APOBEC3F-201ENST00000308521 CASP4P49662 377 aa11.05□□□□□ -0.64
APOBEC3F-201ENST00000308521 DRG2P55039 364 aaKnown RBP11.05□□□□□ -0.64
APOBEC3F-201ENST00000308521 PTENP60484 403 aa11.05□□□□□ -0.64
APOBEC3F-201ENST00000308521 MAPK7Q13164 816 aa11.05□□□□□ -0.64
APOBEC3F-201ENST00000308521 FAM102BQ5T8I3 360 aa11.05□□□□□ -0.64
APOBEC3F-201ENST00000308521 XRRA1Q6P2D8 792 aa11.05□□□□□ -0.64
APOBEC3F-201ENST00000308521 SLC30A9Q6PML9 568 aa11.05□□□□□ -0.64
APOBEC3F-201ENST00000308521 EPM2AIP1Q7L775 607 aaPredicted RBP11.05□□□□□ -0.64
APOBEC3F-201ENST00000308521 ZNF513Q8N8E2 541 aaPredicted RBP11.05□□□□□ -0.64
APOBEC3F-201ENST00000308521 C2orf69Q8N8R5 385 aa11.05□□□□□ -0.64
APOBEC3F-201ENST00000308521 DNERQ8NFT8 737 aa11.05□□□□□ -0.64
APOBEC3F-201ENST00000308521 ZNF317Q96PQ6 595 aaPredicted RBP11.05□□□□□ -0.64
APOBEC3F-201ENST00000308521 FMO2Q99518 471 aa11.05□□□□□ -0.64
APOBEC3F-201ENST00000308521 MMP19Q99542 508 aa11.05□□□□□ -0.64
APOBEC3F-201ENST00000308521 KIFC3Q9BVG8 833 aa11.05□□□□□ -0.64
APOBEC3F-201ENST00000308521 METTL14Q9HCE5 456 aaKnown RBP11.05□□□□□ -0.64
APOBEC3F-201ENST00000308521 SIX2Q9NPC8 291 aa11.05□□□□□ -0.64
APOBEC3F-201ENST00000308521 TRPC6Q9Y210 931 aa11.05□□□□□ -0.64
APOBEC3F-201ENST00000308521 PFASO15067 1338 aa11.04□□□□□ -0.64
APOBEC3F-201ENST00000308521 GTPBP10A4D1E9 387 aaKnown RBP11.04□□□□□ -0.64
APOBEC3F-201ENST00000308521 PDXKO00764 312 aa11.04□□□□□ -0.64
APOBEC3F-201ENST00000308521 ABLIM1O14639 778 aa11.04□□□□□ -0.64
APOBEC3F-201ENST00000308521 SLC16A3O15427 465 aaKnown RBP11.04□□□□□ -0.64
APOBEC3F-201ENST00000308521 CALUO43852 315 aaPredicted RBP11.04□□□□□ -0.64
APOBEC3F-201ENST00000308521 JAK3P52333 1124 aa11.04□□□□□ -0.64
APOBEC3F-201ENST00000308521 KCTD2Q14681 263 aa11.04□□□□□ -0.64
APOBEC3F-201ENST00000308521 DUPD1Q68J44 220 aa11.04□□□□□ -0.64
APOBEC3F-201ENST00000308521 CWF19L1Q69YN2 538 aaKnown RBP11.04□□□□□ -0.64
APOBEC3F-201ENST00000308521 ZNF720Q7Z2F6 126 aa11.04□□□□□ -0.64
APOBEC3F-201ENST00000308521 PIGWQ7Z7B1 504 aa11.04□□□□□ -0.64
APOBEC3F-201ENST00000308521 RDH13Q8NBN7 331 aa11.04□□□□□ -0.64
APOBEC3F-201ENST00000308521 SPDYE1Q8NFV5 336 aaPredicted RBP11.04□□□□□ -0.64
APOBEC3F-201ENST00000308521 DTNBP1Q96EV8 351 aa11.04□□□□□ -0.64
APOBEC3F-201ENST00000308521 THOC1Q96FV9 657 aaKnown RBP11.04□□□□□ -0.64
APOBEC3F-201ENST00000308521 CEP170P1Q96L14 293 aa11.04□□□□□ -0.64
APOBEC3F-201ENST00000308521 IWS1Q96ST2 819 aa11.04□□□□□ -0.64
APOBEC3F-201ENST00000308521 NAP1L3Q99457 506 aaPredicted RBP11.04□□□□□ -0.64
APOBEC3F-201ENST00000308521 PTPN18Q99952 460 aa11.04□□□□□ -0.64
APOBEC3F-201ENST00000308521 CCDC134Q9H6E4 229 aa11.04□□□□□ -0.64
APOBEC3F-201ENST00000308521 ZDHHC18Q9NUE0 388 aa11.04□□□□□ -0.64
APOBEC3F-201ENST00000308521 PCDHB13Q9Y5F0 798 aa11.04□□□□□ -0.64
APOBEC3F-201ENST00000308521 DDX3XO00571 662 aaKnown RBP eCLIP11.04□□□□□ -0.64
APOBEC3F-201ENST00000308521 MAFGO15525 162 aa11.04□□□□□ -0.64
APOBEC3F-201ENST00000308521 TGFB1I1O43294 461 aa11.04□□□□□ -0.64
APOBEC3F-201ENST00000308521 ARIH2O95376 493 aa11.04□□□□□ -0.64
APOBEC3F-201ENST00000308521 UBA1P22314 1058 aaKnown RBP11.04□□□□□ -0.64
APOBEC3F-201ENST00000308521 MMP13P45452 471 aa11.04□□□□□ -0.64
APOBEC3F-201ENST00000308521 LMNB2Q03252 620 aa11.04□□□□□ -0.64
APOBEC3F-201ENST00000308521 ZNF746Q6NUN9 644 aaPredicted RBP11.04□□□□□ -0.64
APOBEC3F-201ENST00000308521 DAAM2Q86T65 1068 aa11.04□□□□□ -0.64
APOBEC3F-201ENST00000308521 TRIM74Q86UV6 250 aa11.04□□□□□ -0.64
APOBEC3F-201ENST00000308521 TRIM73Q86UV7 250 aa11.04□□□□□ -0.64
APOBEC3F-201ENST00000308521 FBXO16Q8IX29 292 aaPredicted RBP11.04□□□□□ -0.64
APOBEC3F-201ENST00000308521 C4orf19Q8IY42 314 aa11.04□□□□□ -0.64
APOBEC3F-201ENST00000308521 ANKS4BQ8N8V4 417 aa11.04□□□□□ -0.64
APOBEC3F-201ENST00000308521 SLC30A5Q8TAD4 765 aa11.04□□□□□ -0.64
APOBEC3F-201ENST00000308521 NEK9Q8TD19 979 aa11.04□□□□□ -0.64
APOBEC3F-201ENST00000308521 FGD4Q96M96 766 aa11.04□□□□□ -0.64
APOBEC3F-201ENST00000308521 MCM3APO60318 1980 aa11.03□□□□□ -0.64
APOBEC3F-201ENST00000308521 CCDC169A6NNP5 214 aa11.03□□□□□ -0.64
APOBEC3F-201ENST00000308521 K7ENM7 598 aa11.03□□□□□ -0.64
APOBEC3F-201ENST00000308521 DDX3YO15523 660 aaKnown RBP11.03□□□□□ -0.64
APOBEC3F-201ENST00000308521 XRCC5P13010 732 aaKnown RBP11.03□□□□□ -0.64
APOBEC3F-201ENST00000308521 SFNP31947 248 aa11.03□□□□□ -0.64
APOBEC3F-201ENST00000308521 PEX3P56589 373 aa11.03□□□□□ -0.64
APOBEC3F-201ENST00000308521 HUNKP57058 714 aa11.03□□□□□ -0.64
APOBEC3F-201ENST00000308521 ELF3P78545 371 aaPredicted RBP11.03□□□□□ -0.64
APOBEC3F-201ENST00000308521 DHX34Q14147 1143 aaKnown RBP11.03□□□□□ -0.64
APOBEC3F-201ENST00000308521 BZW1Q7L1Q6 419 aaKnown RBP11.03□□□□□ -0.64
APOBEC3F-201ENST00000308521 COPS5Q92905 334 aa11.03□□□□□ -0.64
APOBEC3F-201ENST00000308521 ERP44Q9BS26 406 aa11.03□□□□□ -0.64
APOBEC3F-201ENST00000308521 TMEM109Q9BVC6 243 aa11.03□□□□□ -0.64
APOBEC3F-201ENST00000308521 CELF4Q9BZC1 486 aaKnown RBP11.03□□□□□ -0.64
APOBEC3F-201ENST00000308521 CARD9Q9H257 536 aa11.03□□□□□ -0.64
APOBEC3F-201ENST00000308521 EPB41L4BQ9H329 900 aa11.03□□□□□ -0.64
APOBEC3F-201ENST00000308521 PABPC3Q9H361 631 aaKnown RBP11.03□□□□□ -0.64
APOBEC3F-201ENST00000308521 PDGFCQ9NRA1 345 aa11.03□□□□□ -0.64
APOBEC3F-201ENST00000308521 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.03□□□□□ -0.64
APOBEC3F-201ENST00000308521 SEPT9Q9UHD8 586 aaPredicted RBP11.03□□□□□ -0.64
APOBEC3F-201ENST00000308521 SLC12A4Q9UP95 1085 aa11.03□□□□□ -0.64
APOBEC3F-201ENST00000308521 SOCS7O14512 581 aa11.03□□□□□ -0.64
APOBEC3F-201ENST00000308521 SLC16A4O15374 487 aa11.03□□□□□ -0.64
APOBEC3F-201ENST00000308521 AKAP3O75969 853 aa11.03□□□□□ -0.64
APOBEC3F-201ENST00000308521 SLC25A27O95847 323 aa11.03□□□□□ -0.64
APOBEC3F-201ENST00000308521 PSAPP07602 524 aa11.03□□□□□ -0.64
APOBEC3F-201ENST00000308521 TMEM253P0C7T8 217 aa11.03□□□□□ -0.64
APOBEC3F-201ENST00000308521 GAP43P17677 238 aa11.03□□□□□ -0.64
APOBEC3F-201ENST00000308521 MUTP22033 750 aa11.03□□□□□ -0.64
APOBEC3F-201ENST00000308521 PRKCEQ02156 737 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms