RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 ALKAL1Q6UXT8 129 aa11.95□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 TMC7Q7Z402 723 aa11.95□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 BRSK2Q8IWQ3 736 aa11.95□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 BEST2Q8NFU1 509 aa11.95□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 PPM1EQ8WY54 764 aa11.95□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 ERCC4Q92889 916 aaPredicted RBP11.95□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 DDX27Q96GQ7 796 aaKnown RBP11.95□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 TCF25Q9BQ70 676 aa11.95□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 HSPBP1Q9NZL4 362 aa11.95□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 ADAM28Q9UKQ2 775 aa11.95□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 UBQLN1Q9UMX0 589 aaKnown RBP11.95□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 PCDHA5Q9Y5H7 936 aa11.95□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 GOLGA8IPA6NC78 632 aa11.94□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 ZNF233A6NK53 670 aa11.94□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 GOLGA8JA6NMD2 632 aa11.94□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 LACTBL1A8MY62 500 aa11.94□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 TGFB1I1O43294 461 aa11.94□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 URODP06132 367 aa11.94□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 HOXD13P35453 343 aa11.94□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 PPP1R2P41236 205 aa11.94□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 SPAG1Q07617 926 aa11.94□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 SMC1AQ14683 1233 aaKnown RBP11.94□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 CCDC85BQ15834 202 aaPredicted RBP11.94□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 JADE1Q6IE81 842 aa11.94□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 FUT10Q6P4F1 479 aa11.94□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 DDX53Q86TM3 631 aaKnown RBP11.94□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 TMEM173Q86WV6 379 aaPredicted RBP11.94□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 NT5DC4Q86YG4 428 aa11.94□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 VPS52Q8N1B4 723 aa11.94□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 GUF1Q8N442 669 aaKnown RBP11.94□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 XXYLT1Q8NBI6 393 aa11.94□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 ZMAT2Q96NC0 199 aaKnown RBP11.94□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 TSG101Q99816 390 aa11.94□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 HERC2P3Q9BVR0 1158 aa11.94□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 CXCL16Q9H2A7 254 aa11.94□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 ASB7Q9H672 318 aa11.94□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 GOLGA2P5Q9HBQ8 144 aa11.94□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 NGRNQ9NPE2 291 aaKnown RBP11.94□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 LMBRD1Q9NUN5 540 aa11.94□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 MARCH5Q9NX47 278 aa11.94□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 CACNG4Q9UBN1 327 aa11.94□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 MAPK8IP1Q9UQF2 711 aa11.94□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 DERAQ9Y315 318 aa11.94□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 SCN1AP35498 2009 aa11.93□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 SZT2Q5T011 3432 aa11.93□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 CDH23Q9H251 3354 aa11.93□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 FSD2A1L4K1 749 aa11.93□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 PODXLO00592 558 aa11.93□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 PDXKO00764 312 aa11.93□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 TRAPPC3O43617 180 aa11.93□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 EXOC3O60645 756 aa11.93□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 B3GAT3O94766 335 aa11.93□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 KIF4AO95239 1232 aa11.93□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 SOD2P04179 222 aa11.93□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 TMEM191BP0C7N4 346 aa11.93□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 CYP3A5P20815 502 aa11.93□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 DNAJB1P25685 340 aa11.93□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 RPL9P32969 192 aaKnown RBP11.93□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 CLCNKBP51801 687 aa11.93□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 ELAVL2Q12926 359 aaKnown RBP11.93□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 SURF1Q15526 300 aa11.93□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 NAB2Q15742 525 aa11.93□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 CAMK4Q16566 473 aa11.93□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 KIAA1841Q6NSI8 718 aa11.93□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 C12orf56Q8IXR9 622 aa11.93□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 SMYD4Q8IYR2 804 aaPredicted RBP11.93□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 HASPINQ8TF76 798 aa11.93□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 BCL7CQ8WUZ0 217 aaPredicted RBP11.93□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 RABGGTAQ92696 567 aa11.93□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 C18orf25Q96B23 403 aaPredicted RBP11.93□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 NUP62CLQ9H1M0 184 aa11.93□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 KCTD10Q9H3F6 313 aa11.93□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 TUBGCP4Q9UGJ1 667 aa11.93□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 SSX2IPQ9Y2D8 614 aa11.93□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 FRMD4BQ9Y2L6 1034 aa11.93□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 C2CD2Q9Y426 696 aa11.93□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 NUB1Q9Y5A7 615 aa11.93□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 MTCL1Q9Y4B5 1905 aaKnown RBP11.93□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 TSC2P49815 1807 aa11.93□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 MYO7AQ13402 2215 aa11.92□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 PLXNA3P51805 1871 aa11.92□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.92□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 TMEM189-UBE2V1I3L0A0 370 aa11.92□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 BIN1O00499 593 aa11.92□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 FSCN2O14926 492 aa11.92□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 MBD3O95983 291 aa11.92□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 NR3C1P04150 777 aa11.92□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 ADRB2P07550 413 aa11.92□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 NFICP08651 508 aa11.92□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 CTSAP10619 480 aa11.92□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 MCM4P33991 863 aa11.92□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 IRS1P35568 1242 aa11.92□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 GLUD2P49448 558 aa11.92□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 ERVFC1P60507 584 aa11.92□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 SOX4Q06945 474 aaPredicted RBP11.92□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 SNRNP35Q16560 246 aaKnown RBP11.92□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 UPP1Q16831 310 aa11.92□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 TCEAL5Q5H9L2 206 aa11.92□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 ISM2Q6H9L7 571 aa11.92□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 DCLRE1AQ6PJP8 1040 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms