RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 CWF19L1Q69YN2 538 aaKnown RBP13.83□□□□□ -0.2
TRIM35-201ENST00000305364 RSAD2Q8WXG1 361 aa13.83□□□□□ -0.2
TRIM35-201ENST00000305364 INPP5DQ92835 1189 aa13.83□□□□□ -0.2
TRIM35-201ENST00000305364 DDX27Q96GQ7 796 aaKnown RBP13.83□□□□□ -0.2
TRIM35-201ENST00000305364 RBM17Q96I25 401 aaKnown RBP13.83□□□□□ -0.2
TRIM35-201ENST00000305364 FAM20AQ96MK3 541 aa13.83□□□□□ -0.2
TRIM35-201ENST00000305364 TTC25Q96NG3 672 aa13.83□□□□□ -0.2
TRIM35-201ENST00000305364 ADAM7Q9H2U9 754 aa13.83□□□□□ -0.2
TRIM35-201ENST00000305364 SENP1Q9P0U3 644 aa13.83□□□□□ -0.2
TRIM35-201ENST00000305364 KCNG1Q9UIX4 513 aa13.83□□□□□ -0.2
TRIM35-201ENST00000305364 HNRNPCL1O60812 293 aaKnown RBP13.82□□□□□ -0.2
TRIM35-201ENST00000305364 KRT4P19013 534 aa13.82□□□□□ -0.2
TRIM35-201ENST00000305364 RFX1P22670 979 aa13.82□□□□□ -0.2
TRIM35-201ENST00000305364 ARSEP51690 589 aa13.82□□□□□ -0.2
TRIM35-201ENST00000305364 RASA3Q14644 834 aa13.82□□□□□ -0.2
TRIM35-201ENST00000305364 C2CD6Q53TS8 623 aa13.82□□□□□ -0.2
TRIM35-201ENST00000305364 SH2D4BQ5SQS7 431 aa13.82□□□□□ -0.2
TRIM35-201ENST00000305364 ARHGAP18Q8N392 663 aa13.82□□□□□ -0.2
TRIM35-201ENST00000305364 MIPOL1Q8TD10 442 aa13.82□□□□□ -0.2
TRIM35-201ENST00000305364 CCDC134Q9H6E4 229 aa13.82□□□□□ -0.2
TRIM35-201ENST00000305364 ACP6Q9NPH0 428 aa13.82□□□□□ -0.2
TRIM35-201ENST00000305364 C1orf112Q9NSG2 853 aa13.82□□□□□ -0.2
TRIM35-201ENST00000305364 UVRAGQ9P2Y5 699 aa13.82□□□□□ -0.2
TRIM35-201ENST00000305364 BAZ2AQ9UIF9 1905 aaKnown RBP13.82□□□□□ -0.2
TRIM35-201ENST00000305364 PI4K2BG5E9Z4 385 aa13.82□□□□□ -0.2
TRIM35-201ENST00000305364 FESP07332 822 aa13.82□□□□□ -0.2
TRIM35-201ENST00000305364 RALAP11233 206 aa13.82□□□□□ -0.2
TRIM35-201ENST00000305364 TAC1P20366 129 aa13.82□□□□□ -0.2
TRIM35-201ENST00000305364 SLC12A3P55017 1021 aa13.82□□□□□ -0.2
TRIM35-201ENST00000305364 YWHAGP61981 247 aaKnown RBP eCLIP13.82□□□□□ -0.2
TRIM35-201ENST00000305364 ARMC3Q5W041 872 aa13.82□□□□□ -0.2
TRIM35-201ENST00000305364 ANO7Q6IWH7 933 aa13.82□□□□□ -0.2
TRIM35-201ENST00000305364 SLC30A10Q6XR72 485 aa13.82□□□□□ -0.2
TRIM35-201ENST00000305364 SYDE1Q6ZW31 735 aaPredicted RBP13.82□□□□□ -0.2
TRIM35-201ENST00000305364 ARHGAP22Q7Z5H3 698 aa13.82□□□□□ -0.2
TRIM35-201ENST00000305364 NSL1Q96IY1 281 aa13.82□□□□□ -0.2
TRIM35-201ENST00000305364 ENO1P06733 434 aaKnown RBP13.82□□□□□ -0.2
TRIM35-201ENST00000305364 LINGO3P0C6S8 592 aa13.82□□□□□ -0.2
TRIM35-201ENST00000305364 KITP10721 976 aa13.82□□□□□ -0.2
TRIM35-201ENST00000305364 HSPA1LP34931 641 aa13.82□□□□□ -0.2
TRIM35-201ENST00000305364 PTGIRP43119 386 aa13.82□□□□□ -0.2
TRIM35-201ENST00000305364 COG7P83436 770 aa13.82□□□□□ -0.2
TRIM35-201ENST00000305364 AP3B2Q13367 1082 aa13.82□□□□□ -0.2
TRIM35-201ENST00000305364 PARP6Q2NL67 630 aa13.82□□□□□ -0.2
TRIM35-201ENST00000305364 ARSHQ5FYA8 562 aa13.82□□□□□ -0.2
TRIM35-201ENST00000305364 UBAP2Q5T6F2 1119 aaKnown RBP13.82□□□□□ -0.2
TRIM35-201ENST00000305364 VSTM1Q6UX27 236 aa13.82□□□□□ -0.2
TRIM35-201ENST00000305364 DDX50Q9BQ39 737 aaKnown RBP13.82□□□□□ -0.2
TRIM35-201ENST00000305364 MKNK1Q9BUB5 465 aa13.82□□□□□ -0.2
TRIM35-201ENST00000305364 TSSK1BQ9BXA7 367 aa13.82□□□□□ -0.2
TRIM35-201ENST00000305364 AGPAT3Q9NRZ7 376 aa13.82□□□□□ -0.2
TRIM35-201ENST00000305364 B2RBV5 119 aa13.82□□□□□ -0.2
TRIM35-201ENST00000305364 KRT1P04264 644 aa13.82□□□□□ -0.2
TRIM35-201ENST00000305364 TPBGLP0DKB5 382 aa13.82□□□□□ -0.2
TRIM35-201ENST00000305364 TNNI1P19237 187 aa13.82□□□□□ -0.2
TRIM35-201ENST00000305364 PPATQ06203 517 aa13.82□□□□□ -0.2
TRIM35-201ENST00000305364 KPNB1Q14974 876 aaKnown RBP13.82□□□□□ -0.2
TRIM35-201ENST00000305364 RINT1Q6NUQ1 792 aa13.82□□□□□ -0.2
TRIM35-201ENST00000305364 PASD1Q8IV76 773 aa13.82□□□□□ -0.2
TRIM35-201ENST00000305364 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.82□□□□□ -0.2
TRIM35-201ENST00000305364 XXYLT1Q8NBI6 393 aa13.82□□□□□ -0.2
TRIM35-201ENST00000305364 ACCSQ96QU6 501 aa13.82□□□□□ -0.2
TRIM35-201ENST00000305364 C11orf70Q9BRQ4 267 aa13.82□□□□□ -0.2
TRIM35-201ENST00000305364 TMEM109Q9BVC6 243 aa13.82□□□□□ -0.2
TRIM35-201ENST00000305364 TMEM117Q9H0C3 514 aa13.82□□□□□ -0.2
TRIM35-201ENST00000305364 LRMDAQ9H2I8 198 aa13.82□□□□□ -0.2
TRIM35-201ENST00000305364 SMYD3Q9H7B4 428 aa13.82□□□□□ -0.2
TRIM35-201ENST00000305364 NMRK1Q9NWW6 199 aa13.82□□□□□ -0.2
TRIM35-201ENST00000305364 SRP68Q9UHB9 627 aaKnown RBP13.82□□□□□ -0.2
TRIM35-201ENST00000305364 WFS1O76024 890 aa13.81□□□□□ -0.2
TRIM35-201ENST00000305364 SH3BGRP55822 239 aaPredicted RBP13.81□□□□□ -0.2
TRIM35-201ENST00000305364 AP2B1P63010 937 aa13.81□□□□□ -0.2
TRIM35-201ENST00000305364 LRRC74BQ6ZQY2 392 aa13.81□□□□□ -0.2
TRIM35-201ENST00000305364 DENND2DQ9H6A0 471 aaPredicted RBP13.81□□□□□ -0.2
TRIM35-201ENST00000305364 PDP2Q9P2J9 529 aa13.81□□□□□ -0.2
TRIM35-201ENST00000305364 KRT36O76013 467 aa13.81□□□□□ -0.2
TRIM35-201ENST00000305364 PKN2Q16513 984 aaKnown RBP13.81□□□□□ -0.2
TRIM35-201ENST00000305364 GRAMD1BQ3KR37 738 aa13.81□□□□□ -0.2
TRIM35-201ENST00000305364 MIER3Q7Z3K6 550 aa13.81□□□□□ -0.2
TRIM35-201ENST00000305364 ASTN1O14525 1302 aa13.81□□□□□ -0.2
TRIM35-201ENST00000305364 H3BRJ5 948 aa13.81□□□□□ -0.2
TRIM35-201ENST00000305364 SETSIPP0DME0 302 aa13.81□□□□□ -0.2
TRIM35-201ENST00000305364 SP100P23497 879 aaPredicted RBP13.81□□□□□ -0.2
TRIM35-201ENST00000305364 SSTR3P32745 418 aaPredicted RBP13.81□□□□□ -0.2
TRIM35-201ENST00000305364 RPS6KA3P51812 740 aa13.81□□□□□ -0.2
TRIM35-201ENST00000305364 CLEC4GQ6UXB4 293 aa13.81□□□□□ -0.2
TRIM35-201ENST00000305364 RASSF3Q86WH2 238 aa13.81□□□□□ -0.2
TRIM35-201ENST00000305364 THTPAQ9BU02 230 aa13.81□□□□□ -0.2
TRIM35-201ENST00000305364 TMEM206Q9H813 350 aa13.81□□□□□ -0.2
TRIM35-201ENST00000305364 STARD13Q9Y3M8 1113 aa13.81□□□□□ -0.2
TRIM35-201ENST00000305364 SPECC1L-ADORA2AF8WAN1 911 aa13.8□□□□□ -0.2
TRIM35-201ENST00000305364 ZBED4O75132 1171 aa13.8□□□□□ -0.2
TRIM35-201ENST00000305364 BMP3P12645 472 aa13.8□□□□□ -0.2
TRIM35-201ENST00000305364 EPHB1P54762 984 aa13.8□□□□□ -0.2
TRIM35-201ENST00000305364 FAM102BQ5T8I3 360 aa13.8□□□□□ -0.2
TRIM35-201ENST00000305364 RIBC1Q8N443 379 aaPredicted RBP13.8□□□□□ -0.2
TRIM35-201ENST00000305364 RAB3IL1Q8TBN0 382 aa13.8□□□□□ -0.2
TRIM35-201ENST00000305364 CPA5Q8WXQ8 436 aa13.8□□□□□ -0.2
TRIM35-201ENST00000305364 SEC14L1Q92503 715 aa13.8□□□□□ -0.2
TRIM35-201ENST00000305364 GTF3C4Q9UKN8 822 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms