RNA–Protein interactions for RNA: ENST00000303904.7

COPS6-201, Transcript of COP9 signalosome subunit 6, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COPS6, Length 1,432 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6-201ENST00000303904 SCFD1Q8WVM8 642 aa31.13■■■□□ 2.57
COPS6-201ENST00000303904 KIF12Q96FN5 646 aa31.13■■■□□ 2.57
COPS6-201ENST00000303904 MRPL17Q9NRX2 175 aaKnown RBP31.13■■■□□ 2.57
COPS6-201ENST00000303904 RMND1Q9NWS8 449 aa31.13■■■□□ 2.57
COPS6-201ENST00000303904 UBQLN1Q9UMX0 589 aaKnown RBP31.13■■■□□ 2.57
COPS6-201ENST00000303904 IRAK3Q9Y616 596 aa31.13■■■□□ 2.57
COPS6-201ENST00000303904 TRAPPC3O43617 180 aa31.12■■■□□ 2.57
COPS6-201ENST00000303904 B3GAT3O94766 335 aa31.12■■■□□ 2.57
COPS6-201ENST00000303904 SMC2O95347 1197 aa31.12■■■□□ 2.57
COPS6-201ENST00000303904 SRGAP2BP0DMP2 458 aa31.12■■■□□ 2.57
COPS6-201ENST00000303904 UBE2HP62256 183 aa31.12■■■□□ 2.57
COPS6-201ENST00000303904 KCNB1Q14721 858 aa31.12■■■□□ 2.57
COPS6-201ENST00000303904 FUT10Q6P4F1 479 aa31.12■■■□□ 2.57
COPS6-201ENST00000303904 PABPC5Q96DU9 382 aaKnown RBP31.12■■■□□ 2.57
COPS6-201ENST00000303904 ZMAT2Q96NC0 199 aaKnown RBP31.12■■■□□ 2.57
COPS6-201ENST00000303904 HERC2P3Q9BVR0 1158 aa31.12■■■□□ 2.57
COPS6-201ENST00000303904 CXCL16Q9H2A7 254 aa31.12■■■□□ 2.57
COPS6-201ENST00000303904 KIAA1586Q9HCI6 787 aa31.12■■■□□ 2.57
COPS6-201ENST00000303904 MYO7AQ13402 2215 aa31.12■■■□□ 2.57
COPS6-201ENST00000303904 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP31.11■■■□□ 2.57
COPS6-201ENST00000303904 TMEM189-UBE2V1I3L0A0 370 aa31.11■■■□□ 2.57
COPS6-201ENST00000303904 RHOBTB3O94955 611 aa31.11■■■□□ 2.57
COPS6-201ENST00000303904 IL18RAPO95256 599 aa31.11■■■□□ 2.57
COPS6-201ENST00000303904 NRIP1P48552 1158 aa31.11■■■□□ 2.57
COPS6-201ENST00000303904 KNOP1Q1ED39 458 aaKnown RBP31.11■■■□□ 2.57
COPS6-201ENST00000303904 EP400NLQ6ZTU2 488 aa31.11■■■□□ 2.57
COPS6-201ENST00000303904 RBM23Q86U06 439 aaKnown RBP31.11■■■□□ 2.57
COPS6-201ENST00000303904 NELFCDQ8IXH7 590 aa31.11■■■□□ 2.57
COPS6-201ENST00000303904 FAM213AQ9BRX8 229 aa31.11■■■□□ 2.57
COPS6-201ENST00000303904 IGFLR1Q9H665 355 aa31.11■■■□□ 2.57
COPS6-201ENST00000303904 TSHZ2Q9NRE2 1034 aa31.11■■■□□ 2.57
COPS6-201ENST00000303904 DERAQ9Y315 318 aa31.11■■■□□ 2.57
COPS6-201ENST00000303904 LACTBL1A8MY62 500 aa31.1■■■□□ 2.57
COPS6-201ENST00000303904 EXTL3O43909 919 aa31.1■■■□□ 2.57
COPS6-201ENST00000303904 ADRB2P07550 413 aa31.1■■■□□ 2.57
COPS6-201ENST00000303904 CYP3A5P20815 502 aa31.1■■■□□ 2.57
COPS6-201ENST00000303904 CLCNKBP51801 687 aa31.1■■■□□ 2.57
COPS6-201ENST00000303904 HYAL1Q12794 435 aa31.1■■■□□ 2.57
COPS6-201ENST00000303904 STK4Q13043 487 aa31.1■■■□□ 2.57
COPS6-201ENST00000303904 UPP1Q16831 310 aa31.1■■■□□ 2.57
COPS6-201ENST00000303904 USP41Q3LFD5 358 aa31.1■■■□□ 2.57
COPS6-201ENST00000303904 ZBTB41Q5SVQ8 909 aa31.1■■■□□ 2.57
COPS6-201ENST00000303904 PHF6Q8IWS0 365 aaKnown RBP eCLIP31.1■■■□□ 2.57
COPS6-201ENST00000303904 GPD1LQ8N335 351 aa31.1■■■□□ 2.57
COPS6-201ENST00000303904 ATXN2LQ8WWM7 1075 aaKnown RBP31.1■■■□□ 2.57
COPS6-201ENST00000303904 EMILIN2Q9BXX0 1053 aa31.1■■■□□ 2.57
COPS6-201ENST00000303904 GTPBP4Q9BZE4 634 aaKnown RBP31.1■■■□□ 2.57
COPS6-201ENST00000303904 IKZF4Q9H2S9 585 aa31.1■■■□□ 2.57
COPS6-201ENST00000303904 EYSQ5T1H1 3165 aa31.09■■■□□ 2.57
COPS6-201ENST00000303904 KIF4AO95239 1232 aa31.09■■■□□ 2.57
COPS6-201ENST00000303904 PRR29P0C7W0 189 aa31.09■■■□□ 2.57
COPS6-201ENST00000303904 GLUD2P49448 558 aa31.09■■■□□ 2.57
COPS6-201ENST00000303904 NT5DC4Q86YG4 428 aa31.09■■■□□ 2.57
COPS6-201ENST00000303904 ELOA2Q8IYF1 753 aaPredicted RBP31.09■■■□□ 2.57
COPS6-201ENST00000303904 BEST2Q8NFU1 509 aa31.09■■■□□ 2.57
COPS6-201ENST00000303904 NOC3LQ8WTT2 800 aaKnown RBP31.09■■■□□ 2.57
COPS6-201ENST00000303904 PAAF1Q9BRP4 392 aa31.09■■■□□ 2.57
COPS6-201ENST00000303904 CBWD1Q9BRT8 395 aa31.09■■■□□ 2.57
COPS6-201ENST00000303904 UBE2ZQ9H832 354 aaPredicted RBP31.09■■■□□ 2.57
COPS6-201ENST00000303904 CLDND1Q9NY35 253 aa31.09■■■□□ 2.57
COPS6-201ENST00000303904 C2orf71A6NGG8 1288 aa31.08■■■□□ 2.57
COPS6-201ENST00000303904 CREMQ03060 361 aa31.08■■■□□ 2.57
COPS6-201ENST00000303904 ADGRD2Q7Z7M1 963 aa31.08■■■□□ 2.57
COPS6-201ENST00000303904 GPR65Q8IYL9 337 aa31.08■■■□□ 2.57
COPS6-201ENST00000303904 EFHBQ8N7U6 833 aa31.08■■■□□ 2.57
COPS6-201ENST00000303904 RABGGTAQ92696 567 aa31.08■■■□□ 2.57
COPS6-201ENST00000303904 SAAL1Q96ER3 474 aa31.08■■■□□ 2.57
COPS6-201ENST00000303904 GOLGA2P5Q9HBQ8 144 aa31.08■■■□□ 2.57
COPS6-201ENST00000303904 AGPAT3Q9NRZ7 376 aa31.08■■■□□ 2.57
COPS6-201ENST00000303904 RBAKQ9NYW8 714 aaPredicted RBP31.08■■■□□ 2.57
COPS6-201ENST00000303904 C2CD2Q9Y426 696 aa31.08■■■□□ 2.57
COPS6-201ENST00000303904 NUB1Q9Y5A7 615 aa31.08■■■□□ 2.57
COPS6-201ENST00000303904 PCDHGC5Q9Y5F6 944 aa31.08■■■□□ 2.57
COPS6-201ENST00000303904 HIDE1A8MVS5 230 aa31.07■■■□□ 2.57
COPS6-201ENST00000303904 PODXLO00592 558 aa31.07■■■□□ 2.57
COPS6-201ENST00000303904 TMEM132DQ14C87 1099 aa31.07■■■□□ 2.57
COPS6-201ENST00000303904 DUSP6Q16828 381 aa31.07■■■□□ 2.57
COPS6-201ENST00000303904 PDXDC1Q6P996 788 aa31.07■■■□□ 2.57
COPS6-201ENST00000303904 KIAA0895Q8NCT3 520 aa31.07■■■□□ 2.57
COPS6-201ENST00000303904 HASPINQ8TF76 798 aa31.07■■■□□ 2.57
COPS6-201ENST00000303904 GBP4Q96PP9 640 aa31.07■■■□□ 2.57
COPS6-201ENST00000303904 GSDMAQ96QA5 445 aa31.07■■■□□ 2.57
COPS6-201ENST00000303904 PCIF1Q9H4Z3 704 aa31.07■■■□□ 2.57
COPS6-201ENST00000303904 PTPN14Q15678 1187 aa31.07■■■□□ 2.56
COPS6-201ENST00000303904 PPFIBP1Q86W92 1011 aa31.07■■■□□ 2.56
COPS6-201ENST00000303904 RNF168Q8IYW5 571 aaPredicted RBP31.07■■■□□ 2.56
COPS6-201ENST00000303904 C18orf25Q96B23 403 aaPredicted RBP31.07■■■□□ 2.56
COPS6-201ENST00000303904 VN1R3Q9BXE9 311 aa31.07■■■□□ 2.56
COPS6-201ENST00000303904 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP31.07■■■□□ 2.563e-6■■■□□ 14.9
COPS6-201ENST00000303904 HSPBP1Q9NZL4 362 aa31.07■■■□□ 2.56
COPS6-201ENST00000303904 CACNG4Q9UBN1 327 aa31.07■■■□□ 2.56
COPS6-201ENST00000303904 TRIP11Q15643 1979 aa31.06■■■□□ 2.56
COPS6-201ENST00000303904 ZNF233A6NK53 670 aa31.06■■■□□ 2.56
COPS6-201ENST00000303904 F8W810 466 aa31.06■■■□□ 2.56
COPS6-201ENST00000303904 TULP1O00294 542 aaPredicted RBP31.06■■■□□ 2.56
COPS6-201ENST00000303904 MEFVO15553 781 aaPredicted RBP31.06■■■□□ 2.56
COPS6-201ENST00000303904 GADD45BO75293 160 aaPredicted RBP31.06■■■□□ 2.56
COPS6-201ENST00000303904 HOXD13P35453 343 aa31.06■■■□□ 2.56
COPS6-201ENST00000303904 NDUFV1P49821 464 aa31.06■■■□□ 2.56
COPS6-201ENST00000303904 MRPS5P82675 430 aaKnown RBP31.06■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms