RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 PPRC1Q5VV67 1664 aaKnown RBP8.04□□□□□ -1.12
SF3B3-201ENST00000302516 SORBS3O60504 671 aa8.04□□□□□ -1.12
SF3B3-201ENST00000302516 PRR29P0C7W0 189 aa8.04□□□□□ -1.12
SF3B3-201ENST00000302516 PSMA4P25789 261 aaKnown RBP8.04□□□□□ -1.12
SF3B3-201ENST00000302516 QARSP47897 775 aaKnown RBP8.04□□□□□ -1.12
SF3B3-201ENST00000302516 WDR93Q6P2C0 686 aa8.04□□□□□ -1.12
SF3B3-201ENST00000302516 RAPGEF5Q92565 580 aa8.04□□□□□ -1.12
SF3B3-201ENST00000302516 BEGAINQ9BUH8 593 aa8.04□□□□□ -1.12
SF3B3-201ENST00000302516 SLAIN2Q9P270 581 aa8.04□□□□□ -1.12
SF3B3-201ENST00000302516 ZC3H7BQ9UGR2 993 aaKnown RBP8.04□□□□□ -1.12
SF3B3-201ENST00000302516 ZNF711Q9Y462 761 aa8.04□□□□□ -1.12
SF3B3-201ENST00000302516 MTSS1O43312 755 aa8.04□□□□□ -1.12
SF3B3-201ENST00000302516 SLC16A2P36021 539 aa8.04□□□□□ -1.12
SF3B3-201ENST00000302516 PRAMEP78395 509 aa8.04□□□□□ -1.12
SF3B3-201ENST00000302516 ZNF200P98182 395 aaPredicted RBP8.04□□□□□ -1.12
SF3B3-201ENST00000302516 STX3Q13277 289 aa8.04□□□□□ -1.12
SF3B3-201ENST00000302516 PTGISQ16647 500 aa8.04□□□□□ -1.12
SF3B3-201ENST00000302516 FAM98CQ17RN3 349 aaKnown RBP8.04□□□□□ -1.12
SF3B3-201ENST00000302516 ZNF568Q3ZCX4 644 aa8.04□□□□□ -1.12
SF3B3-201ENST00000302516 E4F1Q66K89 784 aaPredicted RBP8.04□□□□□ -1.12
SF3B3-201ENST00000302516 KIAA1841Q6NSI8 718 aa8.04□□□□□ -1.12
SF3B3-201ENST00000302516 LVRNQ6Q4G3 990 aa8.04□□□□□ -1.12
SF3B3-201ENST00000302516 TBC1D19Q8N5T2 526 aa8.04□□□□□ -1.12
SF3B3-201ENST00000302516 CYGBQ8WWM9 190 aa8.04□□□□□ -1.12
SF3B3-201ENST00000302516 LXNQ9BS40 222 aa8.04□□□□□ -1.12
SF3B3-201ENST00000302516 LRRC1Q9BTT6 524 aa8.04□□□□□ -1.12
SF3B3-201ENST00000302516 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.03□□□□□ -1.12
SF3B3-201ENST00000302516 CSTF3Q12996 717 aaKnown RBP8.03□□□□□ -1.12
SF3B3-201ENST00000302516 KRT33BQ14525 404 aa8.03□□□□□ -1.12
SF3B3-201ENST00000302516 TMEM154Q6P9G4 183 aa8.03□□□□□ -1.12
SF3B3-201ENST00000302516 NYAP1Q6ZVC0 841 aa8.03□□□□□ -1.12
SF3B3-201ENST00000302516 ANKS3Q6ZW76 656 aa8.03□□□□□ -1.12
SF3B3-201ENST00000302516 RMDN2Q96LZ7 410 aa8.03□□□□□ -1.12
SF3B3-201ENST00000302516 MAGEB18Q96M61 343 aa8.03□□□□□ -1.12
SF3B3-201ENST00000302516 C11orf70Q9BRQ4 267 aa8.03□□□□□ -1.12
SF3B3-201ENST00000302516 MMTAG2Q9BU76 263 aaKnown RBP8.03□□□□□ -1.12
SF3B3-201ENST00000302516 POLR3FQ9H1D9 316 aaPredicted RBP8.03□□□□□ -1.12
SF3B3-201ENST00000302516 PIH1D3Q9NQM4 214 aaKnown RBP8.03□□□□□ -1.12
SF3B3-201ENST00000302516 DTNBO60941 627 aa8.03□□□□□ -1.12
SF3B3-201ENST00000302516 HADHAP40939 763 aa8.03□□□□□ -1.12
SF3B3-201ENST00000302516 EIF3EP60228 445 aaKnown RBP8.03□□□□□ -1.12
SF3B3-201ENST00000302516 ANO4Q32M45 955 aa8.03□□□□□ -1.12
SF3B3-201ENST00000302516 HEMGNQ9BXL5 484 aa8.03□□□□□ -1.12
SF3B3-201ENST00000302516 VCPKMTQ9H867 229 aa8.03□□□□□ -1.12
SF3B3-201ENST00000302516 USP17L5A8MUK1 530 aa8.03□□□□□ -1.12
SF3B3-201ENST00000302516 H7C1W4 665 aa8.03□□□□□ -1.12
SF3B3-201ENST00000302516 HSD17B4P51659 736 aa8.03□□□□□ -1.12
SF3B3-201ENST00000302516 NUP107P57740 925 aa8.03□□□□□ -1.12
SF3B3-201ENST00000302516 DEPDC1Q5TB30 811 aa8.03□□□□□ -1.12
SF3B3-201ENST00000302516 THOC1Q96FV9 657 aaKnown RBP8.03□□□□□ -1.12
SF3B3-201ENST00000302516 ZNF302Q9NR11 478 aa8.03□□□□□ -1.12
SF3B3-201ENST00000302516 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.03□□□□□ -1.12
SF3B3-201ENST00000302516 MROH7-TTC4A0A0A0MT08 1334 aa8.03□□□□□ -1.12
SF3B3-201ENST00000302516 ERBB3P21860 1342 aa8.03□□□□□ -1.12
SF3B3-201ENST00000302516 MAP3K13O43283 966 aa8.03□□□□□ -1.12
SF3B3-201ENST00000302516 DNAJC6O75061 913 aa8.03□□□□□ -1.12
SF3B3-201ENST00000302516 RHOBTB3O94955 611 aa8.03□□□□□ -1.12
SF3B3-201ENST00000302516 CDK17Q00537 523 aa8.03□□□□□ -1.12
SF3B3-201ENST00000302516 DMC1Q14565 340 aa8.03□□□□□ -1.12
SF3B3-201ENST00000302516 HABP4Q5JVS0 413 aaKnown RBP8.03□□□□□ -1.12
SF3B3-201ENST00000302516 SLC27A3Q5K4L6 730 aa8.03□□□□□ -1.12
SF3B3-201ENST00000302516 OR6B3Q8NGW1 331 aa8.03□□□□□ -1.12
SF3B3-201ENST00000302516 IL17RAQ96F46 866 aa8.03□□□□□ -1.12
SF3B3-201ENST00000302516 CCT7Q99832 543 aa8.03□□□□□ -1.12
SF3B3-201ENST00000302516 SLC13A1Q9BZW2 595 aa8.03□□□□□ -1.12
SF3B3-201ENST00000302516 WHRNQ9P202 907 aa8.03□□□□□ -1.12
SF3B3-201ENST00000302516 TTC7AQ9ULT0 858 aaPredicted RBP8.03□□□□□ -1.12
SF3B3-201ENST00000302516 PCDHGB4Q9UN71 923 aa8.03□□□□□ -1.12
SF3B3-201ENST00000302516 AURKCQ9UQB9 309 aa8.03□□□□□ -1.12
SF3B3-201ENST00000302516 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.03□□□□□ -1.12
SF3B3-201ENST00000302516 EYA4O95677 639 aa8.03□□□□□ -1.12
SF3B3-201ENST00000302516 DUOXA2Q1HG44 320 aa8.03□□□□□ -1.12
SF3B3-201ENST00000302516 SHC4Q6S5L8 630 aa8.03□□□□□ -1.12
SF3B3-201ENST00000302516 PASD1Q8IV76 773 aa8.03□□□□□ -1.12
SF3B3-201ENST00000302516 SLC35G2Q8TBE7 412 aa8.03□□□□□ -1.12
SF3B3-201ENST00000302516 TSC22D4Q9Y3Q8 395 aa8.03□□□□□ -1.12
SF3B3-201ENST00000302516 EMSYQ7Z589 1322 aa8.03□□□□□ -1.12
SF3B3-201ENST00000302516 IQSEC2Q5JU85 1478 aa8.03□□□□□ -1.12
SF3B3-201ENST00000302516 SLIT1O75093 1534 aa8.03□□□□□ -1.12
SF3B3-201ENST00000302516 DENND3A2RUS2 1198 aa8.03□□□□□ -1.12
SF3B3-201ENST00000302516 PI4K2BG5E9Z4 385 aa8.03□□□□□ -1.12
SF3B3-201ENST00000302516 SASH1O94885 1247 aa8.03□□□□□ -1.12
SF3B3-201ENST00000302516 CYP2E1P05181 493 aaPredicted RBP8.03□□□□□ -1.12
SF3B3-201ENST00000302516 BRD2P25440 801 aaKnown RBP8.03□□□□□ -1.12
SF3B3-201ENST00000302516 SOX6P35712 828 aa8.03□□□□□ -1.12
SF3B3-201ENST00000302516 CDH6P55285 790 aa8.03□□□□□ -1.12
SF3B3-201ENST00000302516 KYNUQ16719 465 aa8.03□□□□□ -1.12
SF3B3-201ENST00000302516 FAM102AQ5T9C2 384 aaPredicted RBP8.03□□□□□ -1.12
SF3B3-201ENST00000302516 URGCPQ8TCY9 931 aa8.03□□□□□ -1.12
SF3B3-201ENST00000302516 RSPH1Q8WYR4 309 aa8.03□□□□□ -1.12
SF3B3-201ENST00000302516 SELENONQ9NZV5 590 aa8.03□□□□□ -1.12
SF3B3-201ENST00000302516 GDF11O95390 407 aa8.03□□□□□ -1.12
SF3B3-201ENST00000302516 P4HBP07237 508 aaKnown RBP8.03□□□□□ -1.12
SF3B3-201ENST00000302516 CDC25AP30304 524 aa8.03□□□□□ -1.12
SF3B3-201ENST00000302516 HOXA13P31271 388 aaPredicted RBP8.03□□□□□ -1.12
SF3B3-201ENST00000302516 COPAP53621 1224 aa8.03□□□□□ -1.12
SF3B3-201ENST00000302516 SLC10A5Q5PT55 438 aa8.03□□□□□ -1.12
SF3B3-201ENST00000302516 CDR2LQ86X02 465 aaPredicted RBP8.03□□□□□ -1.12
SF3B3-201ENST00000302516 TAGAPQ8N103 731 aa8.03□□□□□ -1.12
SF3B3-201ENST00000302516 RBBP8Q99708 897 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms