RNA–Protein interactions for RNA: ENST00000301364.9

TSR1-201, Transcript of TSR1, ribosome maturation factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSR1, Length 5,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-201ENST00000301364 SPDYE2Q495Y8 402 aa20.42■□□□□ 0.86
TSR1-201ENST00000301364 RBBP8NLQ8NC74 664 aaPredicted RBP20.42■□□□□ 0.86
TSR1-201ENST00000301364 KCNV2Q8TDN2 545 aa20.42■□□□□ 0.86
TSR1-201ENST00000301364 DSTYKQ6XUX3 929 aa20.41■□□□□ 0.86
TSR1-201ENST00000301364 SLC13A5Q86YT5 568 aaPredicted RBP20.41■□□□□ 0.86
TSR1-201ENST00000301364 FAM49AQ9H0Q0 323 aaPredicted RBP20.41■□□□□ 0.86
TSR1-201ENST00000301364 MRPL40Q9NQ50 206 aaKnown RBP20.41■□□□□ 0.86
TSR1-201ENST00000301364 ANGPTL3Q9Y5C1 460 aa20.41■□□□□ 0.86
TSR1-201ENST00000301364 ADGRA1Q86SQ6 560 aa20.41■□□□□ 0.86
TSR1-201ENST00000301364 ANKEF1Q9NU02 776 aa20.41■□□□□ 0.86
TSR1-201ENST00000301364 A0A0A6YYK5 440 aaPredicted RBP20.41■□□□□ 0.86
TSR1-201ENST00000301364 MAFGO15525 162 aa20.41■□□□□ 0.86
TSR1-201ENST00000301364 RXRBP28702 533 aa20.41■□□□□ 0.86
TSR1-201ENST00000301364 KYNUQ16719 465 aa20.41■□□□□ 0.86
TSR1-201ENST00000301364 HIPK4Q8NE63 616 aa20.41■□□□□ 0.86
TSR1-201ENST00000301364 ZSWIM1Q9BR11 485 aa20.41■□□□□ 0.86
TSR1-201ENST00000301364 KITP10721 976 aa20.41■□□□□ 0.86
TSR1-201ENST00000301364 NCOA4Q13772 614 aa20.41■□□□□ 0.86
TSR1-201ENST00000301364 SLC13A1Q9BZW2 595 aa20.41■□□□□ 0.86
TSR1-201ENST00000301364 SEC23IPQ9Y6Y8 1000 aaKnown RBP20.41■□□□□ 0.86
TSR1-201ENST00000301364 GJB7Q6PEY0 223 aa20.4■□□□□ 0.86
TSR1-201ENST00000301364 SCG3Q8WXD2 468 aaKnown RBP20.4■□□□□ 0.86
TSR1-201ENST00000301364 SERPINB12Q96P63 405 aa20.4■□□□□ 0.86
TSR1-201ENST00000301364 SH2D3AQ9BRG2 576 aa20.4■□□□□ 0.86
TSR1-201ENST00000301364 RIOX1Q9H6W3 641 aa20.4■□□□□ 0.86
TSR1-201ENST00000301364 MED24O75448 989 aa20.4■□□□□ 0.86
TSR1-201ENST00000301364 TTLL4Q14679 1199 aa20.4■□□□□ 0.86
TSR1-201ENST00000301364 TRIM67Q6ZTA4 783 aa20.4■□□□□ 0.86
TSR1-201ENST00000301364 THAP2Q9H0W7 228 aa20.4■□□□□ 0.86
TSR1-201ENST00000301364 NDE1Q9NXR1 346 aa20.4■□□□□ 0.86
TSR1-201ENST00000301364 STAT5BP51692 787 aa20.4■□□□□ 0.86
TSR1-201ENST00000301364 VPS72Q15906 364 aa20.4■□□□□ 0.86
TSR1-201ENST00000301364 SGSM1Q2NKQ1 1148 aa20.4■□□□□ 0.86
TSR1-201ENST00000301364 ANKMY2Q8IV38 441 aa20.4■□□□□ 0.86
TSR1-201ENST00000301364 MYCBPAPQ8TBZ2 947 aa20.4■□□□□ 0.86
TSR1-201ENST00000301364 PPFIA2O75334 1257 aa20.4■□□□□ 0.86
TSR1-201ENST00000301364 CHEK2O96017 543 aa20.4■□□□□ 0.86
TSR1-201ENST00000301364 MAGEA4P43358 317 aa20.4■□□□□ 0.86
TSR1-201ENST00000301364 KCNJ1P48048 391 aa20.4■□□□□ 0.86
TSR1-201ENST00000301364 ACOT2P49753 483 aa20.4■□□□□ 0.86
TSR1-201ENST00000301364 OCRLQ01968 901 aa20.4■□□□□ 0.86
TSR1-201ENST00000301364 PDE1CQ14123 709 aaPredicted RBP20.4■□□□□ 0.86
TSR1-201ENST00000301364 MEI1Q5TIA1 1274 aa20.4■□□□□ 0.86
TSR1-201ENST00000301364 TTC1Q99614 292 aa20.4■□□□□ 0.86
TSR1-201ENST00000301364 APOL1O14791 398 aa20.4■□□□□ 0.86
TSR1-201ENST00000301364 SH3RF1Q7Z6J0 888 aa20.4■□□□□ 0.86
TSR1-201ENST00000301364 FAM151AQ8WW52 585 aa20.4■□□□□ 0.86
TSR1-201ENST00000301364 TBRG4Q969Z0 631 aaKnown RBP eCLIP20.4■□□□□ 0.86
TSR1-201ENST00000301364 ARL8AQ96BM9 186 aa20.4■□□□□ 0.86
TSR1-201ENST00000301364 EARS2Q5JPH6 523 aaKnown RBP20.39■□□□□ 0.86
TSR1-201ENST00000301364 PIP4K2CQ8TBX8 421 aa20.39■□□□□ 0.86
TSR1-201ENST00000301364 SMYD3Q9H7B4 428 aa20.39■□□□□ 0.86
TSR1-201ENST00000301364 BATF3Q9NR55 127 aa20.39■□□□□ 0.86
TSR1-201ENST00000301364 PFDN1O60925 122 aa20.39■□□□□ 0.85
TSR1-201ENST00000301364 PAPOLAP51003 745 aaKnown RBP20.39■□□□□ 0.85
TSR1-201ENST00000301364 ITGA8P53708 1063 aa20.39■□□□□ 0.85
TSR1-201ENST00000301364 PMS1P54277 932 aaKnown RBP20.39■□□□□ 0.85
TSR1-201ENST00000301364 XRRA1Q6P2D8 792 aa20.39■□□□□ 0.85
TSR1-201ENST00000301364 KCNV1Q6PIU1 500 aa20.39■□□□□ 0.85
TSR1-201ENST00000301364 GJD4Q96KN9 370 aaPredicted RBP20.39■□□□□ 0.85
TSR1-201ENST00000301364 DHX35Q9H5Z1 703 aaKnown RBP20.39■□□□□ 0.85
TSR1-201ENST00000301364 C17orf75Q9HAS0 396 aa20.39■□□□□ 0.85
TSR1-201ENST00000301364 NR3C2P08235 984 aa20.39■□□□□ 0.85
TSR1-201ENST00000301364 BAATQ14032 418 aaPredicted RBP20.39■□□□□ 0.85
TSR1-201ENST00000301364 GIT2Q14161 759 aa20.39■□□□□ 0.85
TSR1-201ENST00000301364 STILQ15468 1287 aa20.39■□□□□ 0.85
TSR1-201ENST00000301364 WDR72Q3MJ13 1102 aa20.39■□□□□ 0.85
TSR1-201ENST00000301364 SPOUT1Q5T280 376 aaKnown RBP20.39■□□□□ 0.85
TSR1-201ENST00000301364 APOBEC3FQ8IUX4 373 aaKnown RBP20.39■□□□□ 0.85
TSR1-201ENST00000301364 RNF168Q8IYW5 571 aaPredicted RBP20.39■□□□□ 0.85
TSR1-201ENST00000301364 RNF149Q8NC42 400 aa20.39■□□□□ 0.85
TSR1-201ENST00000301364 RUSC1Q9BVN2 902 aa20.39■□□□□ 0.85
TSR1-201ENST00000301364 SUDS3Q9H7L9 328 aaPredicted RBP20.39■□□□□ 0.85
TSR1-201ENST00000301364 TMBIM4Q9HC24 238 aa20.39■□□□□ 0.85
TSR1-201ENST00000301364 HLA-DRAP01903 254 aa20.39■□□□□ 0.85
TSR1-201ENST00000301364 PRKCBP05771 671 aa20.39■□□□□ 0.85
TSR1-201ENST00000301364 TYK2P29597 1187 aa20.39■□□□□ 0.85
TSR1-201ENST00000301364 Q3C1V9 767 aa20.39■□□□□ 0.85
TSR1-201ENST00000301364 TRIM15Q9C019 465 aa20.39■□□□□ 0.85
TSR1-201ENST00000301364 GTPBP10A4D1E9 387 aaKnown RBP20.38■□□□□ 0.85
TSR1-201ENST00000301364 SPAG6O75602 509 aa20.38■□□□□ 0.85
TSR1-201ENST00000301364 LARP7Q4G0J3 582 aaKnown RBP eCLIP20.38■□□□□ 0.851e-323■■■□□ 16.4
TSR1-201ENST00000301364 RSBN1LQ6PCB5 846 aaPredicted RBP20.38■□□□□ 0.85
TSR1-201ENST00000301364 BTBD6Q96KE9 485 aa20.38■□□□□ 0.85
TSR1-201ENST00000301364 GGT7Q9UJ14 662 aa20.38■□□□□ 0.85
TSR1-201ENST00000301364 AFF2P51816 1311 aa20.38■□□□□ 0.85
TSR1-201ENST00000301364 PDHA1P08559 390 aa20.38■□□□□ 0.85
TSR1-201ENST00000301364 ITPRIPL1Q6GPH6 555 aa20.38■□□□□ 0.85
TSR1-201ENST00000301364 RWDD4Q6NW29 188 aaKnown RBP20.38■□□□□ 0.85
TSR1-201ENST00000301364 C1orf228Q6PIY5 440 aa20.38■□□□□ 0.85
TSR1-201ENST00000301364 ABI1Q8IZP0 508 aa20.38■□□□□ 0.85
TSR1-201ENST00000301364 LRRN4CLQ8ND94 238 aa20.38■□□□□ 0.85
TSR1-201ENST00000301364 RDM1Q8NG50 284 aa20.38■□□□□ 0.85
TSR1-201ENST00000301364 SCFD1Q8WVM8 642 aa20.38■□□□□ 0.85
TSR1-201ENST00000301364 TEX13BQ9BXU2 312 aa20.38■□□□□ 0.85
TSR1-201ENST00000301364 RANBP17Q9H2T7 1088 aaKnown RBP20.38■□□□□ 0.85
TSR1-201ENST00000301364 IGSF9BQ9UPX0 1349 aa20.38■□□□□ 0.85
TSR1-201ENST00000301364 CCDC195A0A1B0GUA6 201 aa20.38■□□□□ 0.85
TSR1-201ENST00000301364 TYW5A2RUC4 315 aaKnown RBP20.38■□□□□ 0.85
TSR1-201ENST00000301364 DIAPH2O60879 1101 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms