RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 MTRF1LQ9UGC7 380 aaKnown RBP13.79□□□□□ -0.2
HIF3A-204ENST00000300862 RGS16O15492 202 aaPredicted RBP13.78□□□□□ -0.2
HIF3A-204ENST00000300862 ATP2C2O75185 946 aa13.78□□□□□ -0.2
HIF3A-204ENST00000300862 TNNI1P19237 187 aa13.78□□□□□ -0.2
HIF3A-204ENST00000300862 RXRBP28702 533 aa13.78□□□□□ -0.2
HIF3A-204ENST00000300862 HMGCS2P54868 508 aa13.78□□□□□ -0.2
HIF3A-204ENST00000300862 SGO2Q562F6 1265 aa13.78□□□□□ -0.2
HIF3A-204ENST00000300862 ZNF526Q8TF50 670 aaPredicted RBP13.78□□□□□ -0.2
HIF3A-204ENST00000300862 ZBTB45Q96K62 511 aaPredicted RBP13.78□□□□□ -0.2
HIF3A-204ENST00000300862 CAMKK2Q96RR4 588 aa13.78□□□□□ -0.2
HIF3A-204ENST00000300862 DDX23Q9BUQ8 820 aaKnown RBP13.78□□□□□ -0.2
HIF3A-204ENST00000300862 HEMGNQ9BXL5 484 aa13.78□□□□□ -0.2
HIF3A-204ENST00000300862 KLC4Q9NSK0 619 aa13.78□□□□□ -0.2
HIF3A-204ENST00000300862 PTPRJQ12913 1337 aa13.78□□□□□ -0.2
HIF3A-204ENST00000300862 DOCK5Q9H7D0 1870 aa13.78□□□□□ -0.2
HIF3A-204ENST00000300862 FOXO6A8MYZ6 492 aa13.78□□□□□ -0.2
HIF3A-204ENST00000300862 PEX10O60683 326 aa13.78□□□□□ -0.2
HIF3A-204ENST00000300862 ECEL1O95672 775 aa13.78□□□□□ -0.2
HIF3A-204ENST00000300862 NLRP11P59045 1033 aaKnown RBP13.78□□□□□ -0.2
HIF3A-204ENST00000300862 PLCB4Q15147 1175 aa13.78□□□□□ -0.2
HIF3A-204ENST00000300862 CYP1B1Q16678 543 aa13.78□□□□□ -0.2
HIF3A-204ENST00000300862 SEZ6Q53EL9 994 aa13.78□□□□□ -0.2
HIF3A-204ENST00000300862 ZBTB41Q5SVQ8 909 aa13.78□□□□□ -0.2
HIF3A-204ENST00000300862 CPLX4Q7Z7G2 160 aa13.78□□□□□ -0.2
HIF3A-204ENST00000300862 SPIRE2Q8WWL2 714 aa13.78□□□□□ -0.2
HIF3A-204ENST00000300862 ATP6V0A1Q93050 837 aa13.78□□□□□ -0.2
HIF3A-204ENST00000300862 SEC16BQ96JE7 1060 aa13.78□□□□□ -0.2
HIF3A-204ENST00000300862 PWWP2AQ96N64 755 aa13.78□□□□□ -0.2
HIF3A-204ENST00000300862 ADAM7Q9H2U9 754 aa13.78□□□□□ -0.2
HIF3A-204ENST00000300862 JPH1Q9HDC5 661 aaPredicted RBP13.78□□□□□ -0.2
HIF3A-204ENST00000300862 C1orf112Q9NSG2 853 aa13.78□□□□□ -0.2
HIF3A-204ENST00000300862 MAP3K20Q9NYL2 800 aaKnown RBP13.78□□□□□ -0.2
HIF3A-204ENST00000300862 GGA2Q9UJY4 613 aa13.78□□□□□ -0.2
HIF3A-204ENST00000300862 FER1L6Q2WGJ9 1857 aa13.78□□□□□ -0.2
HIF3A-204ENST00000300862 SRRM3A6NNA2 597 aaPredicted RBP13.78□□□□□ -0.2
HIF3A-204ENST00000300862 CHUKO15111 745 aa13.78□□□□□ -0.2
HIF3A-204ENST00000300862 RIPK2O43353 540 aa13.78□□□□□ -0.2
HIF3A-204ENST00000300862 GJB6O95452 261 aa13.78□□□□□ -0.2
HIF3A-204ENST00000300862 ACSL3O95573 720 aa13.78□□□□□ -0.2
HIF3A-204ENST00000300862 GGPS1O95749 300 aa13.78□□□□□ -0.2
HIF3A-204ENST00000300862 GJC1P36383 396 aa13.78□□□□□ -0.2
HIF3A-204ENST00000300862 LIG4P49917 911 aa13.78□□□□□ -0.2
HIF3A-204ENST00000300862 ACTR2P61160 394 aa13.78□□□□□ -0.2
HIF3A-204ENST00000300862 KRT17Q04695 432 aa13.78□□□□□ -0.2
HIF3A-204ENST00000300862 BYSLQ13895 437 aaKnown RBP13.78□□□□□ -0.2
HIF3A-204ENST00000300862 MCOLN2Q8IZK6 566 aa13.78□□□□□ -0.2
HIF3A-204ENST00000300862 SLC17A8Q8NDX2 589 aa13.78□□□□□ -0.2
HIF3A-204ENST00000300862 JDP2Q8WYK2 163 aa13.78□□□□□ -0.2
HIF3A-204ENST00000300862 ART4Q93070 314 aa13.78□□□□□ -0.2
HIF3A-204ENST00000300862 XPO6Q96QU8 1125 aaKnown RBP13.78□□□□□ -0.2
HIF3A-204ENST00000300862 MTFR1LQ9H019 292 aa13.78□□□□□ -0.2
HIF3A-204ENST00000300862 SLC40A1Q9NP59 571 aa13.78□□□□□ -0.2
HIF3A-204ENST00000300862 CYP26B1Q9NR63 512 aa13.78□□□□□ -0.2
HIF3A-204ENST00000300862 ASIC3Q9UHC3 531 aa13.78□□□□□ -0.2
HIF3A-204ENST00000300862 HACL1Q9UJ83 578 aa13.78□□□□□ -0.2
HIF3A-204ENST00000300862 R3HDM2Q9Y2K5 976 aaKnown RBP13.78□□□□□ -0.2
HIF3A-204ENST00000300862 MROH7Q68CQ1 1323 aa13.77□□□□□ -0.2
HIF3A-204ENST00000300862 PASKQ96RG2 1323 aa13.77□□□□□ -0.2
HIF3A-204ENST00000300862 TP73O15350 636 aa13.77□□□□□ -0.21
HIF3A-204ENST00000300862 UNGP13051 313 aaPredicted RBP13.77□□□□□ -0.21
HIF3A-204ENST00000300862 SAMD3Q8N6K7 520 aa13.77□□□□□ -0.21
HIF3A-204ENST00000300862 MORC4Q8TE76 937 aa13.77□□□□□ -0.21
HIF3A-204ENST00000300862 HLA-DRAP01903 254 aa13.77□□□□□ -0.21
HIF3A-204ENST00000300862 PSAPP07602 524 aa13.77□□□□□ -0.21
HIF3A-204ENST00000300862 PAEPP09466 180 aa13.77□□□□□ -0.21
HIF3A-204ENST00000300862 HARSP12081 509 aaKnown RBP13.77□□□□□ -0.21
HIF3A-204ENST00000300862 CHKAP35790 457 aa13.77□□□□□ -0.21
HIF3A-204ENST00000300862 IFNAR2P48551 515 aa13.77□□□□□ -0.21
HIF3A-204ENST00000300862 BACE1P56817 501 aa13.77□□□□□ -0.21
HIF3A-204ENST00000300862 SP2Q02086 613 aa13.77□□□□□ -0.21
HIF3A-204ENST00000300862 FSTL1Q12841 308 aa13.77□□□□□ -0.21
HIF3A-204ENST00000300862 TNFAIP1Q13829 316 aa13.77□□□□□ -0.21
HIF3A-204ENST00000300862 TMEM132BQ14DG7 1078 aa13.77□□□□□ -0.21
HIF3A-204ENST00000300862 LONRF1Q17RB8 773 aa13.77□□□□□ -0.21
HIF3A-204ENST00000300862 BRDTQ58F21 947 aaPredicted RBP13.77□□□□□ -0.21
HIF3A-204ENST00000300862 ERMARDQ5T6L9 678 aa13.77□□□□□ -0.21
HIF3A-204ENST00000300862 TDRD10Q5VZ19 366 aaKnown RBP13.77□□□□□ -0.21
HIF3A-204ENST00000300862 GPRASP2Q96D09 838 aa13.77□□□□□ -0.21
HIF3A-204ENST00000300862 HVCN1Q96D96 273 aa13.77□□□□□ -0.21
HIF3A-204ENST00000300862 IFT74Q96LB3 600 aa13.77□□□□□ -0.21
HIF3A-204ENST00000300862 FNBP1Q96RU3 617 aa13.77□□□□□ -0.21
HIF3A-204ENST00000300862 C11orf70Q9BRQ4 267 aa13.77□□□□□ -0.21
HIF3A-204ENST00000300862 HAPLN2Q9GZV7 340 aa13.77□□□□□ -0.21
HIF3A-204ENST00000300862 PDLIM7Q9NR12 457 aa13.77□□□□□ -0.21
HIF3A-204ENST00000300862 SLC9A2Q9UBY0 812 aa13.77□□□□□ -0.21
HIF3A-204ENST00000300862 GJA3Q9Y6H8 435 aa13.77□□□□□ -0.21
HIF3A-204ENST00000300862 MYPNQ86TC9 1320 aa13.77□□□□□ -0.21
HIF3A-204ENST00000300862 KIAA1217Q5T5P2 1943 aa13.76□□□□□ -0.21
HIF3A-204ENST00000300862 DGAT1O75907 488 aa13.76□□□□□ -0.21
HIF3A-204ENST00000300862 DRD4P21917 467 aa13.76□□□□□ -0.21
HIF3A-204ENST00000300862 NF2P35240 595 aa13.76□□□□□ -0.21
HIF3A-204ENST00000300862 PIK3CAP42336 1068 aa13.76□□□□□ -0.21
HIF3A-204ENST00000300862 CALCOCO2Q13137 446 aa13.76□□□□□ -0.21
HIF3A-204ENST00000300862 PREPLQ4J6C6 727 aaPredicted RBP13.76□□□□□ -0.21
HIF3A-204ENST00000300862 SPDYCQ5MJ68 293 aa13.76□□□□□ -0.21
HIF3A-204ENST00000300862 PRUNE1Q86TP1 453 aa13.76□□□□□ -0.21
HIF3A-204ENST00000300862 MICALL2Q8IY33 904 aa13.76□□□□□ -0.21
HIF3A-204ENST00000300862 NSUN6Q8TEA1 469 aaKnown RBP13.76□□□□□ -0.21
HIF3A-204ENST00000300862 PGM2Q96G03 612 aa13.76□□□□□ -0.21
HIF3A-204ENST00000300862 WRNIP1Q96S55 665 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms