RNA–Protein interactions for RNA: ENST00000299855.9

MMP3-201, Transcript of matrix metallopeptidase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MMP3, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3-201ENST00000299855 GEN1Q17RS7 908 aa9.75□□□□□ -0.85
MMP3-201ENST00000299855 C15orf59Q2T9L4 293 aaPredicted RBP9.75□□□□□ -0.85
MMP3-201ENST00000299855 HAUS3Q68CZ6 603 aa9.75□□□□□ -0.85
MMP3-201ENST00000299855 LIN54Q6MZP7 749 aa9.75□□□□□ -0.85
MMP3-201ENST00000299855 LRIG3Q6UXM1 1119 aa9.75□□□□□ -0.85
MMP3-201ENST00000299855 CCDC121Q6ZUS5 278 aa9.75□□□□□ -0.85
MMP3-201ENST00000299855 ERMP1Q7Z2K6 904 aa9.75□□□□□ -0.85
MMP3-201ENST00000299855 DGLUCYQ7Z3D6 616 aa9.75□□□□□ -0.85
MMP3-201ENST00000299855 STRA8Q7Z7C7 330 aa9.75□□□□□ -0.85
MMP3-201ENST00000299855 SMYD4Q8IYR2 804 aaPredicted RBP9.75□□□□□ -0.85
MMP3-201ENST00000299855 TTC5Q8N0Z6 440 aa9.75□□□□□ -0.85
MMP3-201ENST00000299855 ADSSL1Q8N142 457 aa9.75□□□□□ -0.85
MMP3-201ENST00000299855 RNF10Q8N5U6 811 aaKnown RBP9.75□□□□□ -0.85
MMP3-201ENST00000299855 TRIML2Q8N7C3 387 aa9.75□□□□□ -0.85
MMP3-201ENST00000299855 TSEN2Q8NCE0 465 aaKnown RBP9.75□□□□□ -0.85
MMP3-201ENST00000299855 FATE1Q969F0 183 aa9.75□□□□□ -0.85
MMP3-201ENST00000299855 RRP36Q96EU6 259 aaKnown RBP9.75□□□□□ -0.85
MMP3-201ENST00000299855 ATP6V1G3Q96LB4 118 aa9.75□□□□□ -0.85
MMP3-201ENST00000299855 ALS2CR12Q96Q35 445 aa9.75□□□□□ -0.85
MMP3-201ENST00000299855 OSBPL9Q96SU4 736 aa9.75□□□□□ -0.85
MMP3-201ENST00000299855 EDEM3Q9BZQ6 932 aa9.75□□□□□ -0.85
MMP3-201ENST00000299855 KIAA1683Q9H0B3 1180 aa9.75□□□□□ -0.85
MMP3-201ENST00000299855 MYLK2Q9H1R3 596 aa9.75□□□□□ -0.85
MMP3-201ENST00000299855 PRDM5Q9NQX1 630 aaPredicted RBP9.75□□□□□ -0.85
MMP3-201ENST00000299855 BATF3Q9NR55 127 aa9.75□□□□□ -0.85
MMP3-201ENST00000299855 MAPK8IP1Q9UQF2 711 aa9.75□□□□□ -0.85
MMP3-201ENST00000299855 DOT1LQ8TEK3 1739 aa9.75□□□□□ -0.85
MMP3-201ENST00000299855 MYH10P35580 1976 aa9.74□□□□□ -0.85
MMP3-201ENST00000299855 XDHP47989 1333 aa9.74□□□□□ -0.85
MMP3-201ENST00000299855 ERICH2A1L162 156 aa9.74□□□□□ -0.85
MMP3-201ENST00000299855 ZBBXA8MT70 800 aa9.74□□□□□ -0.85
MMP3-201ENST00000299855 CACNB4O00305 520 aaPredicted RBP9.74□□□□□ -0.85
MMP3-201ENST00000299855 ZSCAN9O15535 394 aaPredicted RBP9.74□□□□□ -0.85
MMP3-201ENST00000299855 PJA2O43164 708 aa9.74□□□□□ -0.85
MMP3-201ENST00000299855 EPN2O95208 641 aa9.74□□□□□ -0.85
MMP3-201ENST00000299855 GNRH1P01148 92 aa9.74□□□□□ -0.85
MMP3-201ENST00000299855 S100A6P06703 90 aa9.74□□□□□ -0.85
MMP3-201ENST00000299855 GHRP10912 638 aa9.74□□□□□ -0.85
MMP3-201ENST00000299855 KRT2P35908 639 aa9.74□□□□□ -0.85
MMP3-201ENST00000299855 HNF4AP41235 474 aa9.74□□□□□ -0.85
MMP3-201ENST00000299855 IL1RL1Q01638 556 aa9.74□□□□□ -0.85
MMP3-201ENST00000299855 CCDC57Q2TAC2 916 aa9.74□□□□□ -0.85
MMP3-201ENST00000299855 KRTCAP3Q53RY4 240 aa9.74□□□□□ -0.85
MMP3-201ENST00000299855 SLC6A19Q695T7 634 aa9.74□□□□□ -0.85
MMP3-201ENST00000299855 CCDC149Q6ZUS6 474 aa9.74□□□□□ -0.85
MMP3-201ENST00000299855 FUKQ8N0W3 1084 aa9.74□□□□□ -0.85
MMP3-201ENST00000299855 FANCBQ8NB91 859 aa9.74□□□□□ -0.85
MMP3-201ENST00000299855 PHF20Q9BVI0 1012 aa9.74□□□□□ -0.85
MMP3-201ENST00000299855 INCENPQ9NQS7 918 aa9.74□□□□□ -0.85
MMP3-201ENST00000299855 DDX20Q9UHI6 824 aaKnown RBP9.74□□□□□ -0.85
MMP3-201ENST00000299855 TRHDEQ9UKU6 1024 aa9.74□□□□□ -0.85
MMP3-201ENST00000299855 GPR34Q9UPC5 381 aa9.74□□□□□ -0.85
MMP3-201ENST00000299855 PCDH11XQ9BZA7 1347 aa9.74□□□□□ -0.85
MMP3-201ENST00000299855 PCDH11YQ9BZA8 1340 aa9.74□□□□□ -0.85
MMP3-201ENST00000299855 RCCD1A6NED2 376 aa9.73□□□□□ -0.85
MMP3-201ENST00000299855 RRN3P2A6NIE6 340 aa9.73□□□□□ -0.85
MMP3-201ENST00000299855 B4DLN1 442 aa9.73□□□□□ -0.85
MMP3-201ENST00000299855 GABRDO14764 452 aa9.73□□□□□ -0.85
MMP3-201ENST00000299855 SMAD7O15105 426 aaKnown RBP9.73□□□□□ -0.85
MMP3-201ENST00000299855 MAFKO60675 156 aa9.73□□□□□ -0.85
MMP3-201ENST00000299855 EIF4BP23588 611 aaKnown RBP9.73□□□□□ -0.85
MMP3-201ENST00000299855 PRCPP42785 496 aa9.73□□□□□ -0.85
MMP3-201ENST00000299855 NPTX2P47972 431 aa9.73□□□□□ -0.85
MMP3-201ENST00000299855 TRIM28Q13263 835 aaKnown RBP9.73□□□□□ -0.85
MMP3-201ENST00000299855 XRCC4Q13426 336 aa9.73□□□□□ -0.85
MMP3-201ENST00000299855 CFAP221Q4G0U5 840 aa9.73□□□□□ -0.85
MMP3-201ENST00000299855 ARL6IP4Q66PJ3 421 aaKnown RBP9.73□□□□□ -0.85
MMP3-201ENST00000299855 C8orf74Q6P047 294 aa9.73□□□□□ -0.85
MMP3-201ENST00000299855 ARHGAP27Q6ZUM4 889 aa9.73□□□□□ -0.85
MMP3-201ENST00000299855 FAM47EQ6ZV65 393 aa9.73□□□□□ -0.85
MMP3-201ENST00000299855 FAM114A1Q8IWE2 563 aa9.73□□□□□ -0.85
MMP3-201ENST00000299855 LRRC71Q8N4P6 559 aa9.73□□□□□ -0.85
MMP3-201ENST00000299855 AADATQ8N5Z0 425 aa9.73□□□□□ -0.85
MMP3-201ENST00000299855 ADAMTS18Q8TE60 1221 aa9.73□□□□□ -0.85
MMP3-201ENST00000299855 CCDC42Q96M95 316 aa9.73□□□□□ -0.85
MMP3-201ENST00000299855 MFSD14AQ96MC6 490 aa9.73□□□□□ -0.85
MMP3-201ENST00000299855 ERGIC2Q96RQ1 377 aa9.73□□□□□ -0.85
MMP3-201ENST00000299855 CFHR5Q9BXR6 569 aa9.73□□□□□ -0.85
MMP3-201ENST00000299855 SH2D4AQ9H788 454 aa9.73□□□□□ -0.85
MMP3-201ENST00000299855 LRRC4BQ9NT99 713 aa9.73□□□□□ -0.85
MMP3-201ENST00000299855 PLAGL2Q9UPG8 496 aa9.73□□□□□ -0.85
MMP3-201ENST00000299855 SNX8Q9Y5X2 465 aa9.73□□□□□ -0.85
MMP3-201ENST00000299855 TJP1Q07157 1748 aa9.73□□□□□ -0.85
MMP3-201ENST00000299855 TIAM2Q8IVF5 1701 aa9.73□□□□□ -0.85
MMP3-201ENST00000299855 GRID2IPA4D2P6 1211 aa9.73□□□□□ -0.85
MMP3-201ENST00000299855 GMNCA6NCL1 334 aa9.73□□□□□ -0.85
MMP3-201ENST00000299855 C5orf60A6NFR6 353 aa9.73□□□□□ -0.85
MMP3-201ENST00000299855 ZNF233A6NK53 670 aa9.73□□□□□ -0.85
MMP3-201ENST00000299855 H7C0S8 307 aa9.73□□□□□ -0.85
MMP3-201ENST00000299855 DIAPH2O60879 1101 aa9.73□□□□□ -0.85
MMP3-201ENST00000299855 DKK1O94907 266 aa9.73□□□□□ -0.85
MMP3-201ENST00000299855 PSMC4P43686 418 aa9.73□□□□□ -0.85
MMP3-201ENST00000299855 SOX9P48436 509 aa9.73□□□□□ -0.85
MMP3-201ENST00000299855 ATXN1P54253 815 aaKnown RBP9.73□□□□□ -0.85
MMP3-201ENST00000299855 ITGB3BPQ13352 177 aaPredicted RBP9.73□□□□□ -0.85
MMP3-201ENST00000299855 ALKBH5Q6P6C2 394 aaKnown RBP9.73□□□□□ -0.85
MMP3-201ENST00000299855 CYB5D1Q6P9G0 228 aa9.73□□□□□ -0.85
MMP3-201ENST00000299855 LHFPL2Q6ZUX7 228 aa9.73□□□□□ -0.85
MMP3-201ENST00000299855 LPCAT2Q7L5N7 544 aa9.73□□□□□ -0.85
MMP3-201ENST00000299855 COLGALT2Q8IYK4 626 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms