RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 PRPF31Q8WWY3 499 aaKnown RBP12.62□□□□□ -0.39
RHO-201ENST00000296271 PPP1R16BQ96T49 567 aa12.62□□□□□ -0.39
RHO-201ENST00000296271 MSTO1Q9BUK6 570 aa12.62□□□□□ -0.39
RHO-201ENST00000296271 SLITRK6Q9H5Y7 841 aa12.62□□□□□ -0.39
RHO-201ENST00000296271 RBAKQ9NYW8 714 aaPredicted RBP12.62□□□□□ -0.39
RHO-201ENST00000296271 ANAPC7Q9UJX3 599 aa12.62□□□□□ -0.39
RHO-201ENST00000296271 TTC7AQ9ULT0 858 aaPredicted RBP12.62□□□□□ -0.39
RHO-201ENST00000296271 UTP11Q9Y3A2 253 aaKnown RBP12.62□□□□□ -0.39
RHO-201ENST00000296271 PTPRFP10586 1907 aa12.62□□□□□ -0.39
RHO-201ENST00000296271 PMM2O15305 246 aa12.62□□□□□ -0.39
RHO-201ENST00000296271 ATG7O95352 703 aa12.62□□□□□ -0.39
RHO-201ENST00000296271 GZMAP12544 262 aa12.62□□□□□ -0.39
RHO-201ENST00000296271 RPL21P46778 160 aaKnown RBP12.62□□□□□ -0.39
RHO-201ENST00000296271 CCT5P48643 541 aa12.62□□□□□ -0.39
RHO-201ENST00000296271 SEC24CP53992 1094 aa12.62□□□□□ -0.39
RHO-201ENST00000296271 STRN3Q13033 797 aa12.62□□□□□ -0.39
RHO-201ENST00000296271 CUL1Q13616 776 aa12.62□□□□□ -0.39
RHO-201ENST00000296271 SIX1Q15475 284 aaPredicted RBP12.62□□□□□ -0.39
RHO-201ENST00000296271 WDR78Q5VTH9 848 aa12.62□□□□□ -0.39
RHO-201ENST00000296271 DUPD1Q68J44 220 aa12.62□□□□□ -0.39
RHO-201ENST00000296271 C11orf63Q6NUN7 778 aa12.62□□□□□ -0.39
RHO-201ENST00000296271 ANKS1BQ7Z6G8 1248 aa12.62□□□□□ -0.39
RHO-201ENST00000296271 PRUNE1Q86TP1 453 aa12.62□□□□□ -0.39
RHO-201ENST00000296271 SPATC1LQ9H0A9 340 aa12.62□□□□□ -0.39
RHO-201ENST00000296271 C1orf112Q9NSG2 853 aa12.62□□□□□ -0.39
RHO-201ENST00000296271 ZDHHC18Q9NUE0 388 aa12.62□□□□□ -0.39
RHO-201ENST00000296271 BRCA2P51587 3418 aa12.62□□□□□ -0.39
RHO-201ENST00000296271 KIAA0391O15091 583 aaKnown RBP12.61□□□□□ -0.39
RHO-201ENST00000296271 UNGP13051 313 aaPredicted RBP12.61□□□□□ -0.39
RHO-201ENST00000296271 TCF4P15884 667 aa12.61□□□□□ -0.39
RHO-201ENST00000296271 ACO1P21399 889 aaKnown RBP12.61□□□□□ -0.39
RHO-201ENST00000296271 GJC1P36383 396 aa12.61□□□□□ -0.39
RHO-201ENST00000296271 HADHBP55084 474 aaKnown RBP12.61□□□□□ -0.39
RHO-201ENST00000296271 SNRPFP62306 86 aaKnown RBP12.61□□□□□ -0.39
RHO-201ENST00000296271 TRIP13Q15645 432 aaPredicted RBP12.61□□□□□ -0.39
RHO-201ENST00000296271 GPC2Q8N158 579 aa12.61□□□□□ -0.39
RHO-201ENST00000296271 CEP120Q8N960 986 aa12.61□□□□□ -0.39
RHO-201ENST00000296271 SLC7A3Q8WY07 619 aa12.61□□□□□ -0.39
RHO-201ENST00000296271 HVCN1Q96D96 273 aa12.61□□□□□ -0.39
RHO-201ENST00000296271 CDHR1Q96JP9 859 aa12.61□□□□□ -0.39
RHO-201ENST00000296271 C11orf70Q9BRQ4 267 aa12.61□□□□□ -0.39
RHO-201ENST00000296271 ERP44Q9BS26 406 aa12.61□□□□□ -0.39
RHO-201ENST00000296271 EPB41L4BQ9H329 900 aa12.61□□□□□ -0.39
RHO-201ENST00000296271 C17orf75Q9HAS0 396 aa12.61□□□□□ -0.39
RHO-201ENST00000296271 KLHL11Q9NVR0 708 aa12.61□□□□□ -0.39
RHO-201ENST00000296271 GTF3C4Q9UKN8 822 aa12.61□□□□□ -0.39
RHO-201ENST00000296271 DAAM1Q9Y4D1 1078 aa12.61□□□□□ -0.39
RHO-201ENST00000296271 SMIM23A6NLE4 172 aa12.61□□□□□ -0.39
RHO-201ENST00000296271 CNMDO75829 334 aa12.61□□□□□ -0.39
RHO-201ENST00000296271 SCP2P22307 547 aa12.61□□□□□ -0.39
RHO-201ENST00000296271 TMOD1P28289 359 aa12.61□□□□□ -0.39
RHO-201ENST00000296271 STAT5BP51692 787 aa12.61□□□□□ -0.39
RHO-201ENST00000296271 PSMD6Q15008 389 aa12.61□□□□□ -0.39
RHO-201ENST00000296271 CCDC137Q6PK04 289 aaKnown RBP12.61□□□□□ -0.39
RHO-201ENST00000296271 FBXO16Q8IX29 292 aaPredicted RBP12.61□□□□□ -0.39
RHO-201ENST00000296271 SEC14L1Q92503 715 aa12.61□□□□□ -0.39
RHO-201ENST00000296271 ATP6V1G3Q96LB4 118 aa12.61□□□□□ -0.39
RHO-201ENST00000296271 FGD4Q96M96 766 aa12.61□□□□□ -0.39
RHO-201ENST00000296271 HEMGNQ9BXL5 484 aa12.61□□□□□ -0.39
RHO-201ENST00000296271 PDGFCQ9NRA1 345 aa12.61□□□□□ -0.39
RHO-201ENST00000296271 DNAJC17Q9NVM6 304 aaKnown RBP12.61□□□□□ -0.39
RHO-201ENST00000296271 GRHL1Q9NZI5 618 aa12.61□□□□□ -0.39
RHO-201ENST00000296271 CNTNAP2Q9UHC6 1331 aa12.6□□□□□ -0.39
RHO-201ENST00000296271 SOCS7O14512 581 aa12.6□□□□□ -0.39
RHO-201ENST00000296271 ECM2O94769 699 aaPredicted RBP12.6□□□□□ -0.39
RHO-201ENST00000296271 CD58P19256 250 aa12.6□□□□□ -0.39
RHO-201ENST00000296271 MCCD1P59942 119 aaPredicted RBP12.6□□□□□ -0.39
RHO-201ENST00000296271 SH3D19Q5HYK7 790 aa12.6□□□□□ -0.39
RHO-201ENST00000296271 NOL9Q5SY16 702 aaKnown RBP12.6□□□□□ -0.39
RHO-201ENST00000296271 FAM182AQ5T1J6 154 aa12.6□□□□□ -0.39
RHO-201ENST00000296271 MCOLN2Q8IZK6 566 aa12.6□□□□□ -0.39
RHO-201ENST00000296271 UBL4BQ8N7F7 174 aa12.6□□□□□ -0.39
RHO-201ENST00000296271 SLC17A8Q8NDX2 589 aa12.6□□□□□ -0.39
RHO-201ENST00000296271 BCAS4Q8TDM0 211 aa12.6□□□□□ -0.39
RHO-201ENST00000296271 PWWP2AQ96N64 755 aa12.6□□□□□ -0.39
RHO-201ENST00000296271 ASCC2Q9H1I8 757 aaPredicted RBP12.6□□□□□ -0.39
RHO-201ENST00000296271 TMBIM4Q9HC24 238 aa12.6□□□□□ -0.39
RHO-201ENST00000296271 PCDHB4Q9Y5E5 795 aa12.6□□□□□ -0.39
RHO-201ENST00000296271 IGKV6D-21A0A0A0MT36 114 aa12.6□□□□□ -0.39
RHO-201ENST00000296271 A0A0B4J269 797 aa12.6□□□□□ -0.39
RHO-201ENST00000296271 B4GALT5O43286 388 aa12.6□□□□□ -0.39
RHO-201ENST00000296271 ITGBL1O95965 494 aaPredicted RBP12.6□□□□□ -0.39
RHO-201ENST00000296271 NR1D1P20393 614 aa12.6□□□□□ -0.39
RHO-201ENST00000296271 MAPK4P31152 587 aa12.6□□□□□ -0.39
RHO-201ENST00000296271 RTP1P59025 263 aa12.6□□□□□ -0.39
RHO-201ENST00000296271 PDE4CQ08493 712 aa12.6□□□□□ -0.39
RHO-201ENST00000296271 TARBP2Q15633 366 aaKnown RBP12.6□□□□□ -0.39
RHO-201ENST00000296271 ATP13A4Q4VNC1 1196 aa12.6□□□□□ -0.39
RHO-201ENST00000296271 SLC13A5Q86YT5 568 aaPredicted RBP12.6□□□□□ -0.39
RHO-201ENST00000296271 TMEM192Q8IY95 271 aa12.6□□□□□ -0.39
RHO-201ENST00000296271 TCHPQ9BT92 498 aa12.6□□□□□ -0.39
RHO-201ENST00000296271 FAM107BQ9H098 131 aa12.6□□□□□ -0.39
RHO-201ENST00000296271 CHST7Q9NS84 486 aa12.6□□□□□ -0.39
RHO-201ENST00000296271 R3HDM2Q9Y2K5 976 aaKnown RBP12.6□□□□□ -0.39
RHO-201ENST00000296271 PCDHA3Q9Y5H8 950 aa12.6□□□□□ -0.39
RHO-201ENST00000296271 EIF3HO15372 352 aaKnown RBP eCLIP12.59□□□□□ -0.39
RHO-201ENST00000296271 PHF2O75151 1096 aa12.59□□□□□ -0.39
RHO-201ENST00000296271 RPS6KA5O75582 802 aa12.59□□□□□ -0.39
RHO-201ENST00000296271 ICAM3P32942 547 aa12.59□□□□□ -0.39
RHO-201ENST00000296271 GCNT1Q02742 428 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms