RNA–Protein interactions for RNA: ENST00000296254.3

TMEM41A-201, Transcript of transmembrane protein 41A, humanhuman

TSL 2 BASIC

Gene TMEM41A, Length 1,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM41A-201ENST00000296254 CACNA1IQ9P0X4 2223 aa17.58■□□□□ 0.4
TMEM41A-201ENST00000296254 TKTP29401 623 aaKnown RBP17.58■□□□□ 0.4
TMEM41A-201ENST00000296254 NEK4P51957 841 aa17.58■□□□□ 0.4
TMEM41A-201ENST00000296254 PFKPQ01813 784 aa17.58■□□□□ 0.4
TMEM41A-201ENST00000296254 UPP1Q16831 310 aa17.58■□□□□ 0.4
TMEM41A-201ENST00000296254 NT5DC1Q5TFE4 455 aa17.58■□□□□ 0.4
TMEM41A-201ENST00000296254 ATF7IP2Q5U623 682 aa17.58■□□□□ 0.4
TMEM41A-201ENST00000296254 CD300LGQ6UXG3 332 aa17.58■□□□□ 0.4
TMEM41A-201ENST00000296254 MAML2Q8IZL2 1156 aaPredicted RBP17.58■□□□□ 0.4
TMEM41A-201ENST00000296254 C3orf58Q8NDZ4 430 aa17.58■□□□□ 0.4
TMEM41A-201ENST00000296254 KIFAP3Q92845 792 aa17.58■□□□□ 0.4
TMEM41A-201ENST00000296254 IFT74Q96LB3 600 aa17.58■□□□□ 0.4
TMEM41A-201ENST00000296254 UROC1Q96N76 676 aa17.58■□□□□ 0.4
TMEM41A-201ENST00000296254 KXD1Q9BQD3 176 aa17.58■□□□□ 0.4
TMEM41A-201ENST00000296254 GOLGA2P5Q9HBQ8 144 aa17.58■□□□□ 0.4
TMEM41A-201ENST00000296254 DNMT3BQ9UBC3 853 aaKnown RBP17.58■□□□□ 0.4
TMEM41A-201ENST00000296254 BACE2Q9Y5Z0 518 aa17.58■□□□□ 0.4
TMEM41A-201ENST00000296254 NOTCH4Q99466 2003 aa17.58■□□□□ 0.4
TMEM41A-201ENST00000296254 CEP250Q9BV73 2442 aa17.57■□□□□ 0.4
TMEM41A-201ENST00000296254 ZNF174Q15697 407 aa17.57■□□□□ 0.4
TMEM41A-201ENST00000296254 ECM1Q16610 540 aa17.57■□□□□ 0.4
TMEM41A-201ENST00000296254 ANKS3Q6ZW76 656 aa17.57■□□□□ 0.4
TMEM41A-201ENST00000296254 BCO2Q9BYV7 579 aa17.57■□□□□ 0.4
TMEM41A-201ENST00000296254 BHMT2Q9H2M3 363 aa17.57■□□□□ 0.4
TMEM41A-201ENST00000296254 PATJQ8NI35 1801 aa17.56■□□□□ 0.4
TMEM41A-201ENST00000296254 PHLPP2Q6ZVD8 1323 aa17.56■□□□□ 0.4
TMEM41A-201ENST00000296254 I3L4J1 428 aa17.56■□□□□ 0.4
TMEM41A-201ENST00000296254 TRAPPC3O43617 180 aa17.56■□□□□ 0.4
TMEM41A-201ENST00000296254 FXR2P51116 673 aaKnown RBP eCLIP17.56■□□□□ 0.4
TMEM41A-201ENST00000296254 SLC5A9Q2M3M2 681 aa17.56■□□□□ 0.4
TMEM41A-201ENST00000296254 SLC44A4Q53GD3 710 aa17.56■□□□□ 0.4
TMEM41A-201ENST00000296254 SLC8B1Q6J4K2 584 aa17.56■□□□□ 0.4
TMEM41A-201ENST00000296254 APBB1IPQ7Z5R6 666 aaPredicted RBP17.56■□□□□ 0.4
TMEM41A-201ENST00000296254 CEP120Q8N960 986 aa17.56■□□□□ 0.4
TMEM41A-201ENST00000296254 ING5Q8WYH8 240 aa17.56■□□□□ 0.4
TMEM41A-201ENST00000296254 RMDN1Q96DB5 314 aa17.56■□□□□ 0.4
TMEM41A-201ENST00000296254 C8orf76Q96K31 380 aa17.56■□□□□ 0.4
TMEM41A-201ENST00000296254 OSBPL6Q9BZF3 934 aa17.56■□□□□ 0.4
TMEM41A-201ENST00000296254 CDT1Q9H211 546 aa17.56■□□□□ 0.4
TMEM41A-201ENST00000296254 FOXP1Q9H334 677 aaPredicted RBP17.56■□□□□ 0.4
TMEM41A-201ENST00000296254 LTB4R2Q9NPC1 389 aa17.56■□□□□ 0.4
TMEM41A-201ENST00000296254 TNFSF13BQ9Y275 285 aa17.56■□□□□ 0.4
TMEM41A-201ENST00000296254 MRPS23Q9Y3D9 190 aaKnown RBP17.56■□□□□ 0.4
TMEM41A-201ENST00000296254 SMIM28A0A1B0GU29 152 aa17.55■□□□□ 0.4
TMEM41A-201ENST00000296254 RHOP08100 348 aa17.55■□□□□ 0.4
TMEM41A-201ENST00000296254 CCT6AP40227 531 aaKnown RBP17.55■□□□□ 0.4
TMEM41A-201ENST00000296254 GRM5P41594 1212 aa17.55■□□□□ 0.4
TMEM41A-201ENST00000296254 BRCC3P46736 316 aa17.55■□□□□ 0.4
TMEM41A-201ENST00000296254 ROR1Q01973 937 aa17.55■□□□□ 0.4
TMEM41A-201ENST00000296254 SOX4Q06945 474 aaPredicted RBP17.55■□□□□ 0.4
TMEM41A-201ENST00000296254 UBXN2BQ14CS0 331 aa17.55■□□□□ 0.4
TMEM41A-201ENST00000296254 ZNF528Q3MIS6 628 aa17.55■□□□□ 0.4
TMEM41A-201ENST00000296254 XKR4Q5GH76 650 aa17.55■□□□□ 0.4
TMEM41A-201ENST00000296254 TTC38Q5R3I4 469 aa17.55■□□□□ 0.4
TMEM41A-201ENST00000296254 KIAA2013Q8IYS2 634 aa17.55■□□□□ 0.4
TMEM41A-201ENST00000296254 RUBCNQ92622 972 aa17.55■□□□□ 0.4
TMEM41A-201ENST00000296254 HINFPQ9BQA5 517 aa17.55■□□□□ 0.4
TMEM41A-201ENST00000296254 POLD4Q9HCU8 107 aa17.55■□□□□ 0.4
TMEM41A-201ENST00000296254 AVENQ9NQS1 362 aaPredicted RBP17.55■□□□□ 0.4
TMEM41A-201ENST00000296254 TOPORSQ9NS56 1045 aaPredicted RBP17.55■□□□□ 0.4
TMEM41A-201ENST00000296254 SPATA6Q9NWH7 488 aaPredicted RBP17.55■□□□□ 0.4
TMEM41A-201ENST00000296254 GDE1Q9NZC3 331 aa17.55■□□□□ 0.4
TMEM41A-201ENST00000296254 FBXO4Q9UKT5 387 aa17.55■□□□□ 0.4
TMEM41A-201ENST00000296254 MTF2Q9Y483 593 aaPredicted RBP17.55■□□□□ 0.4
TMEM41A-201ENST00000296254 ARHGEF37A1IGU5 675 aa17.54■□□□□ 0.4
TMEM41A-201ENST00000296254 K7ERI5 159 aa17.54■□□□□ 0.4
TMEM41A-201ENST00000296254 KINO60870 393 aaKnown RBP17.54■□□□□ 0.4
TMEM41A-201ENST00000296254 ECI2O75521 394 aa17.54■□□□□ 0.4
TMEM41A-201ENST00000296254 MAGEA9P43362 315 aa17.54■□□□□ 0.4
TMEM41A-201ENST00000296254 TRAPPC10P48553 1259 aa17.54■□□□□ 0.4
TMEM41A-201ENST00000296254 YARSP54577 528 aaKnown RBP17.54■□□□□ 0.4
TMEM41A-201ENST00000296254 ZNF568Q3ZCX4 644 aa17.54■□□□□ 0.4
TMEM41A-201ENST00000296254 ALKAL1Q6UXT8 129 aa17.54■□□□□ 0.4
TMEM41A-201ENST00000296254 SUMF1Q8NBK3 374 aa17.54■□□□□ 0.4
TMEM41A-201ENST00000296254 ZNF461Q8TAF7 563 aa17.54■□□□□ 0.4
TMEM41A-201ENST00000296254 CCDC94Q9BW85 323 aaPredicted RBP17.54■□□□□ 0.4
TMEM41A-201ENST00000296254 PTPRHQ9HD43 1115 aa17.54■□□□□ 0.4
TMEM41A-201ENST00000296254 SLC38A7Q9NVC3 462 aa17.54■□□□□ 0.4
TMEM41A-201ENST00000296254 KIAA1024Q9UPX6 916 aa17.54■□□□□ 0.4
TMEM41A-201ENST00000296254 WDR27A2RRH5 827 aa17.53■□□□□ 0.4
TMEM41A-201ENST00000296254 FAM170BA6NMN3 283 aa17.53■□□□□ 0.4
TMEM41A-201ENST00000296254 PODXLO00592 558 aa17.53■□□□□ 0.4
TMEM41A-201ENST00000296254 SPTLC1O15269 473 aa17.53■□□□□ 0.4
TMEM41A-201ENST00000296254 LAMTOR5O43504 91 aa17.53■□□□□ 0.4
TMEM41A-201ENST00000296254 CEBPBP17676 345 aa17.53■□□□□ 0.4
TMEM41A-201ENST00000296254 NPTX2P47972 431 aa17.53■□□□□ 0.4
TMEM41A-201ENST00000296254 DMP1Q13316 513 aaPredicted RBP17.53■□□□□ 0.4
TMEM41A-201ENST00000296254 VARS2Q5ST30 1063 aaKnown RBP17.53■□□□□ 0.4
TMEM41A-201ENST00000296254 TPRG1Q6ZUI0 275 aa17.53■□□□□ 0.4
TMEM41A-201ENST00000296254 CCDC83Q8IWF9 413 aa17.53■□□□□ 0.4
TMEM41A-201ENST00000296254 DAW1Q8N136 415 aa17.53■□□□□ 0.4
TMEM41A-201ENST00000296254 C4orf32Q8N8J7 132 aa17.53■□□□□ 0.4
TMEM41A-201ENST00000296254 FBXO18Q8NFZ0 1043 aa17.53■□□□□ 0.4
TMEM41A-201ENST00000296254 ZMAT2Q96NC0 199 aaKnown RBP17.53■□□□□ 0.4
TMEM41A-201ENST00000296254 ACO2Q99798 780 aaKnown RBP17.53■□□□□ 0.4
TMEM41A-201ENST00000296254 LLPHQ9BRT6 129 aaKnown RBP17.53■□□□□ 0.4
TMEM41A-201ENST00000296254 MRPL4Q9BYD3 311 aaKnown RBP17.53■□□□□ 0.4
TMEM41A-201ENST00000296254 DDX19AQ9NUU7 478 aaKnown RBP17.53■□□□□ 0.4
TMEM41A-201ENST00000296254 ARHGAP28Q9P2N2 729 aa17.53■□□□□ 0.4
TMEM41A-201ENST00000296254 LRWD1Q9UFC0 647 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms