RNA–Protein interactions for RNA: ENST00000296043.6

SHROOM3-201, Transcript of shroom family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM3, Length 11,020 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-201ENST00000296043 PRR23CQ6ZRP0 262 aa12.34□□□□□ -0.43
SHROOM3-201ENST00000296043 MTDHQ86UE4 582 aaKnown RBP12.34□□□□□ -0.43
SHROOM3-201ENST00000296043 CEP95Q96GE4 821 aa12.34□□□□□ -0.43
SHROOM3-201ENST00000296043 ABCC1P33527 1531 aa12.34□□□□□ -0.43
SHROOM3-201ENST00000296043 PHGDHO43175 533 aaKnown RBP12.34□□□□□ -0.43
SHROOM3-201ENST00000296043 ABCE1P61221 599 aaKnown RBP12.34□□□□□ -0.43
SHROOM3-201ENST00000296043 ICA1Q05084 483 aa12.34□□□□□ -0.43
SHROOM3-201ENST00000296043 LGALS3BPQ08380 585 aa12.34□□□□□ -0.43
SHROOM3-201ENST00000296043 PDCD6IPQ8WUM4 868 aaKnown RBP12.34□□□□□ -0.43
SHROOM3-201ENST00000296043 ZNF184Q99676 751 aaPredicted RBP12.34□□□□□ -0.43
SHROOM3-201ENST00000296043 PTK7Q13308 1070 aa12.34□□□□□ -0.43
SHROOM3-201ENST00000296043 RGS21Q2M5E4 152 aa12.34□□□□□ -0.43
SHROOM3-201ENST00000296043 MLPHQ9BV36 600 aaPredicted RBP12.34□□□□□ -0.43
SHROOM3-201ENST00000296043 ATP8A2Q9NTI2 1148 aa12.34□□□□□ -0.43
SHROOM3-201ENST00000296043 SAC3D1A6NKF1 404 aa12.34□□□□□ -0.43
SHROOM3-201ENST00000296043 PSMB9P28065 219 aa12.34□□□□□ -0.43
SHROOM3-201ENST00000296043 PRCPP42785 496 aa12.34□□□□□ -0.43
SHROOM3-201ENST00000296043 CASKIN2Q8WXE0 1202 aa12.34□□□□□ -0.43
SHROOM3-201ENST00000296043 GLG1Q92896 1179 aa12.34□□□□□ -0.43
SHROOM3-201ENST00000296043 B3GALT6Q96L58 329 aa12.34□□□□□ -0.43
SHROOM3-201ENST00000296043 ACCSQ96QU6 501 aa12.34□□□□□ -0.43
SHROOM3-201ENST00000296043 PCDH12Q9NPG4 1184 aa12.34□□□□□ -0.43
SHROOM3-201ENST00000296043 KLHL8Q9P2G9 620 aaPredicted RBP12.34□□□□□ -0.43
SHROOM3-201ENST00000296043 ADCY6O43306 1168 aa12.34□□□□□ -0.43
SHROOM3-201ENST00000296043 KCNMA1Q12791 1236 aa12.34□□□□□ -0.43
SHROOM3-201ENST00000296043 SEPT1Q8WYJ6 367 aa12.34□□□□□ -0.43
SHROOM3-201ENST00000296043 NRDE2Q9H7Z3 1164 aa12.34□□□□□ -0.43
SHROOM3-201ENST00000296043 TRIM49D1C9J1S8 452 aa12.34□□□□□ -0.43
SHROOM3-201ENST00000296043 MYL2P10916 166 aa12.34□□□□□ -0.43
SHROOM3-201ENST00000296043 SSTR3P32745 418 aaPredicted RBP12.34□□□□□ -0.43
SHROOM3-201ENST00000296043 GALK1P51570 392 aa12.34□□□□□ -0.43
SHROOM3-201ENST00000296043 CCSER2Q9H7U1 834 aa12.34□□□□□ -0.43
SHROOM3-201ENST00000296043 CYP26B1Q9NR63 512 aa12.34□□□□□ -0.43
SHROOM3-201ENST00000296043 NXF1Q9UBU9 619 aaKnown RBP12.34□□□□□ -0.43
SHROOM3-201ENST00000296043 H0YCG3 227 aa12.34□□□□□ -0.43
SHROOM3-201ENST00000296043 H2AFXP16104 143 aaPredicted RBP12.34□□□□□ -0.43
SHROOM3-201ENST00000296043 CYFIP1Q7L576 1253 aa12.34□□□□□ -0.43
SHROOM3-201ENST00000296043 ZBTB8OSQ8IWT0 167 aa12.34□□□□□ -0.43
SHROOM3-201ENST00000296043 PLEKHG4BQ96PX9 1271 aa12.34□□□□□ -0.43
SHROOM3-201ENST00000296043 TMEM237Q96Q45 408 aa12.34□□□□□ -0.43
SHROOM3-201ENST00000296043 RBM15Q96T37 977 aaKnown RBP eCLIP12.34□□□□□ -0.43
SHROOM3-201ENST00000296043 KCNB2Q92953 911 aa12.34□□□□□ -0.43
SHROOM3-201ENST00000296043 TRNAU1APQ9NX07 287 aaKnown RBP12.34□□□□□ -0.43
SHROOM3-201ENST00000296043 DNAJC12Q9UKB3 198 aa12.34□□□□□ -0.43
SHROOM3-201ENST00000296043 POTEIP0CG38 1075 aa12.33□□□□□ -0.43
SHROOM3-201ENST00000296043 GPC5P78333 572 aa12.33□□□□□ -0.43
SHROOM3-201ENST00000296043 KRT26Q7Z3Y9 468 aa12.33□□□□□ -0.43
SHROOM3-201ENST00000296043 C9orf72Q96LT7 481 aa12.33□□□□□ -0.43
SHROOM3-201ENST00000296043 TMOD4Q9NZQ9 345 aa12.33□□□□□ -0.43
SHROOM3-201ENST00000296043 POLGP54098 1239 aaPredicted RBP12.33□□□□□ -0.44
SHROOM3-201ENST00000296043 OR6B2Q6IFH4 312 aa12.33□□□□□ -0.44
SHROOM3-201ENST00000296043 SULF1Q8IWU6 871 aa12.33□□□□□ -0.44
SHROOM3-201ENST00000296043 ERLEC1Q96DZ1 483 aa12.33□□□□□ -0.44
SHROOM3-201ENST00000296043 FSD1LQ9BXM9 530 aa12.33□□□□□ -0.44
SHROOM3-201ENST00000296043 CARD8Q9Y2G2 431 aa12.33□□□□□ -0.44
SHROOM3-201ENST00000296043 PEX1O43933 1283 aa12.33□□□□□ -0.44
SHROOM3-201ENST00000296043 NYAP1Q6ZVC0 841 aa12.33□□□□□ -0.44
SHROOM3-201ENST00000296043 PLEKHA8Q96JA3 519 aa12.33□□□□□ -0.44
SHROOM3-201ENST00000296043 SRGAP2CP0DJJ0 459 aa12.33□□□□□ -0.44
SHROOM3-201ENST00000296043 RAG1P15918 1043 aa12.33□□□□□ -0.44
SHROOM3-201ENST00000296043 RAD23AP54725 363 aa12.33□□□□□ -0.44
SHROOM3-201ENST00000296043 ARL6IP4Q66PJ3 421 aaKnown RBP12.33□□□□□ -0.44
SHROOM3-201ENST00000296043 HEXIM2Q96MH2 286 aaKnown RBP12.33□□□□□ -0.44
SHROOM3-201ENST00000296043 RPRD1BQ9NQG5 326 aaKnown RBP12.33□□□□□ -0.44
SHROOM3-201ENST00000296043 ARHGEF38Q9NXL2 777 aa12.33□□□□□ -0.44
SHROOM3-201ENST00000296043 ZDHHC9Q9Y397 364 aa12.33□□□□□ -0.44
SHROOM3-201ENST00000296043 FAM32AQ9Y421 112 aaKnown RBP12.33□□□□□ -0.44
SHROOM3-201ENST00000296043 CLASP2O75122 1294 aaKnown RBP12.33□□□□□ -0.44
SHROOM3-201ENST00000296043 RAPGEF3O95398 923 aa12.33□□□□□ -0.44
SHROOM3-201ENST00000296043 PDZK1Q5T2W1 519 aa12.33□□□□□ -0.44
SHROOM3-201ENST00000296043 EZH1Q92800 747 aaPredicted RBP12.33□□□□□ -0.44
SHROOM3-201ENST00000296043 WNK4Q96J92 1243 aa12.33□□□□□ -0.44
SHROOM3-201ENST00000296043 HBS1LQ9Y450 684 aaKnown RBP12.33□□□□□ -0.44
SHROOM3-201ENST00000296043 MED7O43513 233 aa12.33□□□□□ -0.44
SHROOM3-201ENST00000296043 BRDTQ58F21 947 aaPredicted RBP12.33□□□□□ -0.44
SHROOM3-201ENST00000296043 RASGRP2Q7LDG7 609 aa12.33□□□□□ -0.44
SHROOM3-201ENST00000296043 LRRC47Q8N1G4 583 aaKnown RBP12.33□□□□□ -0.44
SHROOM3-201ENST00000296043 WNT8AQ9H1J5 351 aa12.33□□□□□ -0.44
SHROOM3-201ENST00000296043 LDHAP00338 332 aaKnown RBP12.33□□□□□ -0.44
SHROOM3-201ENST00000296043 MXD4Q14582 209 aaPredicted RBP12.33□□□□□ -0.44
SHROOM3-201ENST00000296043 AASDHQ4L235 1098 aaPredicted RBP12.33□□□□□ -0.44
SHROOM3-201ENST00000296043 NGRNQ9NPE2 291 aaKnown RBP12.33□□□□□ -0.44
SHROOM3-201ENST00000296043 LAD1O00515 517 aa12.33□□□□□ -0.44
SHROOM3-201ENST00000296043 FGAP02671 866 aa12.33□□□□□ -0.44
SHROOM3-201ENST00000296043 POLA2Q14181 598 aa12.33□□□□□ -0.44
SHROOM3-201ENST00000296043 SPANXN2Q5MJ10 180 aa12.33□□□□□ -0.44
SHROOM3-201ENST00000296043 TCHHL1Q5QJ38 904 aaPredicted RBP12.33□□□□□ -0.44
SHROOM3-201ENST00000296043 OTUB1Q96FW1 271 aaPredicted RBP12.33□□□□□ -0.44
SHROOM3-201ENST00000296043 C5orf58C9J3I9 102 aa12.33□□□□□ -0.44
SHROOM3-201ENST00000296043 IRGCQ6NXR0 463 aa12.33□□□□□ -0.44
SHROOM3-201ENST00000296043 TTC30BQ8N4P2 665 aa12.33□□□□□ -0.44
SHROOM3-201ENST00000296043 TRPM2O94759 1503 aa12.32□□□□□ -0.44
SHROOM3-201ENST00000296043 PHF2O75151 1096 aa12.32□□□□□ -0.44
SHROOM3-201ENST00000296043 MTM1Q13496 603 aa12.32□□□□□ -0.44
SHROOM3-201ENST00000296043 FAM89AQ96GI7 184 aa12.32□□□□□ -0.44
SHROOM3-201ENST00000296043 ADAM22Q9P0K1 906 aa12.32□□□□□ -0.44
SHROOM3-201ENST00000296043 TESPA1A2RU30 521 aaPredicted RBP12.32□□□□□ -0.44
SHROOM3-201ENST00000296043 MMP1P03956 469 aa12.32□□□□□ -0.44
SHROOM3-201ENST00000296043 CBX3Q13185 183 aa12.32□□□□□ -0.44
SHROOM3-201ENST00000296043 PPP2R3CQ969Q6 453 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms