RNA–Protein interactions for RNA: ENST00000294816.6

LMX1A-201, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-201ENST00000294816 WDR35Q9P2L0 1181 aa10.92□□□□□ -0.66
LMX1A-201ENST00000294816 ANAPC7Q9UJX3 599 aa10.92□□□□□ -0.66
LMX1A-201ENST00000294816 DCCP43146 1447 aa10.92□□□□□ -0.66
LMX1A-201ENST00000294816 ADGRA3Q8IWK6 1321 aa10.92□□□□□ -0.66
LMX1A-201ENST00000294816 GYG2O15488 501 aa10.92□□□□□ -0.66
LMX1A-201ENST00000294816 PLS3P13797 630 aa10.92□□□□□ -0.66
LMX1A-201ENST00000294816 PTPN4P29074 926 aa10.92□□□□□ -0.66
LMX1A-201ENST00000294816 HOXA13P31271 388 aaPredicted RBP10.92□□□□□ -0.66
LMX1A-201ENST00000294816 BFSP1Q12934 665 aa10.92□□□□□ -0.66
LMX1A-201ENST00000294816 STAT4Q14765 748 aa10.92□□□□□ -0.66
LMX1A-201ENST00000294816 PDCD2Q16342 344 aaPredicted RBP10.92□□□□□ -0.66
LMX1A-201ENST00000294816 C2CD6Q53TS8 623 aa10.92□□□□□ -0.66
LMX1A-201ENST00000294816 NOP9Q86U38 636 aaKnown RBP10.92□□□□□ -0.66
LMX1A-201ENST00000294816 SETDB2Q96T68 719 aa10.92□□□□□ -0.66
LMX1A-201ENST00000294816 LRRC19Q9H756 370 aa10.92□□□□□ -0.66
LMX1A-201ENST00000294816 R3HDM2Q9Y2K5 976 aaKnown RBP10.92□□□□□ -0.66
LMX1A-201ENST00000294816 NHSL1Q5SYE7 1610 aa10.92□□□□□ -0.66
LMX1A-201ENST00000294816 TISP43B9A030 160 aa10.91□□□□□ -0.66
LMX1A-201ENST00000294816 EML1O00423 815 aa10.91□□□□□ -0.66
LMX1A-201ENST00000294816 PIAS1O75925 651 aa10.91□□□□□ -0.66
LMX1A-201ENST00000294816 LMNAP02545 664 aaKnown RBP10.91□□□□□ -0.66
LMX1A-201ENST00000294816 PYGLP06737 847 aa10.91□□□□□ -0.66
LMX1A-201ENST00000294816 MAPK4P31152 587 aa10.91□□□□□ -0.66
LMX1A-201ENST00000294816 CETN2P41208 172 aa10.91□□□□□ -0.66
LMX1A-201ENST00000294816 MAGEA4P43358 317 aa10.91□□□□□ -0.66
LMX1A-201ENST00000294816 SAMD1Q6SPF0 538 aaPredicted RBP10.91□□□□□ -0.66
LMX1A-201ENST00000294816 SLC47A2Q86VL8 602 aa10.91□□□□□ -0.66
LMX1A-201ENST00000294816 PDCD7Q8N8D1 485 aaKnown RBP10.91□□□□□ -0.66
LMX1A-201ENST00000294816 BORCS6Q96GS4 357 aa10.91□□□□□ -0.66
LMX1A-201ENST00000294816 SLAIN2Q9P270 581 aa10.91□□□□□ -0.66
LMX1A-201ENST00000294816 SRP68Q9UHB9 627 aaKnown RBP10.91□□□□□ -0.66
LMX1A-201ENST00000294816 USTQ9Y2C2 406 aa10.91□□□□□ -0.66
LMX1A-201ENST00000294816 LRCH1Q9Y2L9 728 aa10.91□□□□□ -0.66
LMX1A-201ENST00000294816 EEF2P13639 858 aaKnown RBP10.91□□□□□ -0.66
LMX1A-201ENST00000294816 GAP43P17677 238 aa10.91□□□□□ -0.66
LMX1A-201ENST00000294816 SLC1A5Q15758 541 aa10.91□□□□□ -0.66
LMX1A-201ENST00000294816 EPC2Q52LR7 807 aa10.91□□□□□ -0.66
LMX1A-201ENST00000294816 RHBDF2Q6PJF5 856 aa10.91□□□□□ -0.66
LMX1A-201ENST00000294816 GRK7Q8WTQ7 553 aa10.91□□□□□ -0.66
LMX1A-201ENST00000294816 C7orf43Q8WVR3 580 aa10.91□□□□□ -0.66
LMX1A-201ENST00000294816 USP20Q9Y2K6 914 aa10.91□□□□□ -0.66
LMX1A-201ENST00000294816 FRMPD4Q14CM0 1322 aa10.91□□□□□ -0.66
LMX1A-201ENST00000294816 GOLGA8RI6L899 631 aa10.91□□□□□ -0.66
LMX1A-201ENST00000294816 TP73O15350 636 aa10.91□□□□□ -0.66
LMX1A-201ENST00000294816 MAP3K7O43318 606 aa10.91□□□□□ -0.66
LMX1A-201ENST00000294816 EDF1O60869 148 aaKnown RBP10.91□□□□□ -0.66
LMX1A-201ENST00000294816 ASMTLO95671 621 aa10.91□□□□□ -0.66
LMX1A-201ENST00000294816 EYA4O95677 639 aa10.91□□□□□ -0.66
LMX1A-201ENST00000294816 TROVE2P10155 538 aaKnown RBP eCLIP10.91□□□□□ -0.66
LMX1A-201ENST00000294816 PIK3CAP42336 1068 aa10.91□□□□□ -0.66
LMX1A-201ENST00000294816 CPA2P48052 419 aa10.91□□□□□ -0.66
LMX1A-201ENST00000294816 BMT2Q1RMZ1 405 aa10.91□□□□□ -0.66
LMX1A-201ENST00000294816 MFSD14BQ5SR56 506 aa10.91□□□□□ -0.66
LMX1A-201ENST00000294816 LVRNQ6Q4G3 990 aa10.91□□□□□ -0.66
LMX1A-201ENST00000294816 C4orf50Q6ZRC1 276 aa10.91□□□□□ -0.66
LMX1A-201ENST00000294816 STXBP4Q6ZWJ1 553 aa10.91□□□□□ -0.66
LMX1A-201ENST00000294816 OTOAQ7RTW8 1153 aa10.91□□□□□ -0.66
LMX1A-201ENST00000294816 TAB3Q8N5C8 712 aaPredicted RBP10.91□□□□□ -0.66
LMX1A-201ENST00000294816 ENDOVQ8N8Q3 282 aaKnown RBP10.91□□□□□ -0.66
LMX1A-201ENST00000294816 EZH1Q92800 747 aaPredicted RBP10.91□□□□□ -0.66
LMX1A-201ENST00000294816 DYDC2Q96IM9 177 aa10.91□□□□□ -0.66
LMX1A-201ENST00000294816 KLF6Q99612 283 aaPredicted RBP10.91□□□□□ -0.66
LMX1A-201ENST00000294816 GORASP1Q9BQQ3 440 aa10.91□□□□□ -0.66
LMX1A-201ENST00000294816 C12orf65Q9H3J6 166 aaKnown RBP10.91□□□□□ -0.66
LMX1A-201ENST00000294816 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.91□□□□□ -0.66
LMX1A-201ENST00000294816 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.91□□□□□ -0.66
LMX1A-201ENST00000294816 ZMYM2Q9UBW7 1377 aa10.9□□□□□ -0.66
LMX1A-201ENST00000294816 FAM86B1E9PN63 330 aa10.9□□□□□ -0.66
LMX1A-201ENST00000294816 RNF8O76064 485 aa10.9□□□□□ -0.66
LMX1A-201ENST00000294816 HAUS5O94927 633 aa10.9□□□□□ -0.66
LMX1A-201ENST00000294816 FAM86B2P0C5J1 330 aa10.9□□□□□ -0.66
LMX1A-201ENST00000294816 MTM1Q13496 603 aa10.9□□□□□ -0.66
LMX1A-201ENST00000294816 NFIXQ14938 502 aa10.9□□□□□ -0.66
LMX1A-201ENST00000294816 SGSM1Q2NKQ1 1148 aa10.9□□□□□ -0.66
LMX1A-201ENST00000294816 P3H1Q32P28 736 aa10.9□□□□□ -0.66
LMX1A-201ENST00000294816 KAZNQ674X7 775 aa10.9□□□□□ -0.66
LMX1A-201ENST00000294816 LRRC74BQ6ZQY2 392 aa10.9□□□□□ -0.66
LMX1A-201ENST00000294816 C10orf82Q8WW14 230 aa10.9□□□□□ -0.66
LMX1A-201ENST00000294816 MIPEPQ99797 713 aa10.9□□□□□ -0.66
LMX1A-201ENST00000294816 EPAS1Q99814 870 aa10.9□□□□□ -0.66
LMX1A-201ENST00000294816 HERPUD2Q9BSE4 406 aa10.9□□□□□ -0.66
LMX1A-201ENST00000294816 GRID1Q9ULK0 1009 aa10.9□□□□□ -0.66
LMX1A-201ENST00000294816 ATF5Q9Y2D1 282 aaPredicted RBP10.9□□□□□ -0.66
LMX1A-201ENST00000294816 GPR75-ASB3A0A0A6YYF3 556 aa10.9□□□□□ -0.66
LMX1A-201ENST00000294816 GOLGA8IPA6NC78 632 aa10.9□□□□□ -0.66
LMX1A-201ENST00000294816 GOLGA8JA6NMD2 632 aa10.9□□□□□ -0.66
LMX1A-201ENST00000294816 ABLIM1O14639 778 aa10.9□□□□□ -0.66
LMX1A-201ENST00000294816 BAG2O95816 211 aa10.9□□□□□ -0.66
LMX1A-201ENST00000294816 KRT5P13647 590 aa10.9□□□□□ -0.66
LMX1A-201ENST00000294816 UBXN2AP68543 259 aa10.9□□□□□ -0.66
LMX1A-201ENST00000294816 SPIRE1Q08AE8 756 aa10.9□□□□□ -0.66
LMX1A-201ENST00000294816 MOGSQ13724 837 aa10.9□□□□□ -0.66
LMX1A-201ENST00000294816 PTK6Q13882 451 aa10.9□□□□□ -0.66
LMX1A-201ENST00000294816 LRRC23Q53EV4 343 aaPredicted RBP10.9□□□□□ -0.66
LMX1A-201ENST00000294816 TMEM63BQ5T3F8 832 aa10.9□□□□□ -0.66
LMX1A-201ENST00000294816 ARHGAP22Q7Z5H3 698 aa10.9□□□□□ -0.66
LMX1A-201ENST00000294816 TRABD2AQ86V40 505 aa10.9□□□□□ -0.66
LMX1A-201ENST00000294816 ETNPPLQ8TBG4 499 aa10.9□□□□□ -0.66
LMX1A-201ENST00000294816 CYTH2Q99418 400 aa10.9□□□□□ -0.66
LMX1A-201ENST00000294816 CADM1Q9BY67 442 aaKnown RBP10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms