RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 OR6J1Q8NGC5 347 aa13.5□□□□□ -0.25
PTCD1-201ENST00000292478 CNOT7Q9UIV1 285 aaKnown RBP13.5□□□□□ -0.25
PTCD1-201ENST00000292478 FNDC3AQ9Y2H6 1198 aaKnown RBP13.5□□□□□ -0.25
PTCD1-201ENST00000292478 CDR2Q01850 454 aa13.5□□□□□ -0.25
PTCD1-201ENST00000292478 TMEM132DQ14C87 1099 aa13.5□□□□□ -0.25
PTCD1-201ENST00000292478 MORF4L2Q15014 288 aa13.5□□□□□ -0.25
PTCD1-201ENST00000292478 SPDYE1Q8NFV5 336 aaPredicted RBP13.5□□□□□ -0.25
PTCD1-201ENST00000292478 EPN3Q9H201 632 aa13.5□□□□□ -0.25
PTCD1-201ENST00000292478 PIK3R2O00459 728 aa13.5□□□□□ -0.25
PTCD1-201ENST00000292478 TYK2P29597 1187 aa13.5□□□□□ -0.25
PTCD1-201ENST00000292478 SERPINB4P48594 390 aa13.5□□□□□ -0.25
PTCD1-201ENST00000292478 AP2B1P63010 937 aa13.5□□□□□ -0.25
PTCD1-201ENST00000292478 IER5Q5VY09 327 aa13.5□□□□□ -0.25
PTCD1-201ENST00000292478 C1orf228Q6PIY5 440 aa13.5□□□□□ -0.25
PTCD1-201ENST00000292478 FBXL16Q8N461 479 aa13.5□□□□□ -0.25
PTCD1-201ENST00000292478 AGBL3Q8NEM8 1001 aa13.5□□□□□ -0.25
PTCD1-201ENST00000292478 IL25Q9H293 177 aa13.5□□□□□ -0.25
PTCD1-201ENST00000292478 AGAP1Q9UPQ3 857 aa13.5□□□□□ -0.25
PTCD1-201ENST00000292478 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.5□□□□□ -0.25
PTCD1-201ENST00000292478 CHRNA5P30532 468 aa13.49□□□□□ -0.25
PTCD1-201ENST00000292478 ACADSBP45954 432 aa13.49□□□□□ -0.25
PTCD1-201ENST00000292478 LAMB3Q13751 1172 aa13.49□□□□□ -0.25
PTCD1-201ENST00000292478 TRADDQ15628 312 aa13.49□□□□□ -0.25
PTCD1-201ENST00000292478 RBM43Q6ZSC3 357 aaKnown RBP13.49□□□□□ -0.25
PTCD1-201ENST00000292478 ASAP3Q8TDY4 903 aa13.49□□□□□ -0.25
PTCD1-201ENST00000292478 ANKRD7Q92527 254 aa13.49□□□□□ -0.25
PTCD1-201ENST00000292478 EXT2Q93063 718 aa13.49□□□□□ -0.25
PTCD1-201ENST00000292478 ARHGEF26Q96DR7 871 aa13.49□□□□□ -0.25
PTCD1-201ENST00000292478 SGSM3Q96HU1 749 aa13.49□□□□□ -0.25
PTCD1-201ENST00000292478 TMEM247A6NEH6 219 aa13.49□□□□□ -0.25
PTCD1-201ENST00000292478 TRAPPC3O43617 180 aa13.49□□□□□ -0.25
PTCD1-201ENST00000292478 ARHGDIAP52565 204 aa13.49□□□□□ -0.25
PTCD1-201ENST00000292478 NME3Q13232 169 aa13.49□□□□□ -0.25
PTCD1-201ENST00000292478 P3H1Q32P28 736 aa13.49□□□□□ -0.25
PTCD1-201ENST00000292478 RIBC1Q8N443 379 aaPredicted RBP13.49□□□□□ -0.25
PTCD1-201ENST00000292478 APPL2Q8NEU8 664 aa13.49□□□□□ -0.25
PTCD1-201ENST00000292478 EPC1Q9H2F5 836 aa13.49□□□□□ -0.25
PTCD1-201ENST00000292478 EML4Q9HC35 981 aaKnown RBP13.49□□□□□ -0.25
PTCD1-201ENST00000292478 INPP1P49441 399 aa13.49□□□□□ -0.25
PTCD1-201ENST00000292478 NAA30Q147X3 362 aaPredicted RBP13.49□□□□□ -0.25
PTCD1-201ENST00000292478 BTBD6Q96KE9 485 aa13.49□□□□□ -0.25
PTCD1-201ENST00000292478 TRABDQ9H4I3 376 aa13.49□□□□□ -0.25
PTCD1-201ENST00000292478 ECT2Q9H8V3 914 aa13.49□□□□□ -0.25
PTCD1-201ENST00000292478 PRMT7Q9NVM4 692 aaPredicted RBP13.49□□□□□ -0.25
PTCD1-201ENST00000292478 ARL2BPQ9Y2Y0 163 aa13.49□□□□□ -0.25
PTCD1-201ENST00000292478 ZNF185O15231 689 aa13.49□□□□□ -0.25
PTCD1-201ENST00000292478 TRPA1O75762 1119 aa13.49□□□□□ -0.25
PTCD1-201ENST00000292478 FIGNQ5HY92 759 aa13.49□□□□□ -0.25
PTCD1-201ENST00000292478 AP1ARQ63HQ0 302 aa13.49□□□□□ -0.25
PTCD1-201ENST00000292478 PID1Q7Z2X4 250 aa13.49□□□□□ -0.25
PTCD1-201ENST00000292478 HNRNPLLQ8WVV9 542 aaKnown RBP13.49□□□□□ -0.25
PTCD1-201ENST00000292478 PGBD4Q96DM1 585 aa13.49□□□□□ -0.25
PTCD1-201ENST00000292478 HPSEQ9Y251 543 aa13.49□□□□□ -0.25
PTCD1-201ENST00000292478 KIDINS220Q9ULH0 1771 aa13.49□□□□□ -0.25
PTCD1-201ENST00000292478 PREX1Q8TCU6 1659 aa13.48□□□□□ -0.25
PTCD1-201ENST00000292478 PRAMEP78395 509 aa13.48□□□□□ -0.25
PTCD1-201ENST00000292478 PRKCEQ02156 737 aa13.48□□□□□ -0.25
PTCD1-201ENST00000292478 C1orf146Q5VVC0 180 aa13.48□□□□□ -0.25
PTCD1-201ENST00000292478 RNF168Q8IYW5 571 aaPredicted RBP13.48□□□□□ -0.25
PTCD1-201ENST00000292478 RAPGEF5Q92565 580 aa13.48□□□□□ -0.25
PTCD1-201ENST00000292478 PLEKHA5Q9HAU0 1116 aa13.48□□□□□ -0.25
PTCD1-201ENST00000292478 ZNF212Q9UDV6 495 aa13.48□□□□□ -0.25
PTCD1-201ENST00000292478 RGL2O15211 777 aa13.48□□□□□ -0.25
PTCD1-201ENST00000292478 TMCC1O94876 653 aa13.48□□□□□ -0.25
PTCD1-201ENST00000292478 ACTR2P61160 394 aa13.48□□□□□ -0.25
PTCD1-201ENST00000292478 EFTUD2Q15029 972 aaKnown RBP eCLIP13.48□□□□□ -0.254e-7■■■□□ 19.2
PTCD1-201ENST00000292478 TMEM143Q96AN5 459 aa13.48□□□□□ -0.25
PTCD1-201ENST00000292478 IRX2Q9BZI1 471 aaPredicted RBP13.48□□□□□ -0.25
PTCD1-201ENST00000292478 ISCUQ9H1K1 167 aa13.48□□□□□ -0.25
PTCD1-201ENST00000292478 MRGBPQ9NV56 204 aa13.48□□□□□ -0.25
PTCD1-201ENST00000292478 TAF6LQ9Y6J9 622 aa13.48□□□□□ -0.25
PTCD1-201ENST00000292478 SLC9A1P19634 815 aa13.48□□□□□ -0.25
PTCD1-201ENST00000292478 IFNA8P32881 189 aa13.48□□□□□ -0.25
PTCD1-201ENST00000292478 NNMTP40261 264 aa13.48□□□□□ -0.25
PTCD1-201ENST00000292478 TPI1P60174 286 aa13.48□□□□□ -0.25
PTCD1-201ENST00000292478 EP400NLQ6ZTU2 488 aa13.48□□□□□ -0.25
PTCD1-201ENST00000292478 NYAP1Q6ZVC0 841 aa13.48□□□□□ -0.25
PTCD1-201ENST00000292478 SPATA21Q7Z572 469 aa13.48□□□□□ -0.25
PTCD1-201ENST00000292478 CATSPER3Q86XQ3 398 aa13.48□□□□□ -0.25
PTCD1-201ENST00000292478 EFHBQ8N7U6 833 aa13.48□□□□□ -0.25
PTCD1-201ENST00000292478 FRMD8Q9BZ67 464 aaPredicted RBP13.48□□□□□ -0.25
PTCD1-201ENST00000292478 LRRIQ1Q96JM4 1722 aa13.48□□□□□ -0.25
PTCD1-201ENST00000292478 PI4K2BG5E9Z4 385 aa13.48□□□□□ -0.25
PTCD1-201ENST00000292478 PDGFRAP16234 1089 aa13.48□□□□□ -0.25
PTCD1-201ENST00000292478 RPAINQ86UA6 219 aa13.48□□□□□ -0.25
PTCD1-201ENST00000292478 USP38Q8NB14 1042 aa13.48□□□□□ -0.25
PTCD1-201ENST00000292478 SLC13A4Q9UKG4 626 aa13.48□□□□□ -0.25
PTCD1-201ENST00000292478 CEP170BQ9Y4F5 1589 aaPredicted RBP13.48□□□□□ -0.25
PTCD1-201ENST00000292478 ZBTB7AO95365 584 aa13.48□□□□□ -0.25
PTCD1-201ENST00000292478 HLA-DRAP01903 254 aa13.48□□□□□ -0.25
PTCD1-201ENST00000292478 FGFR4P22455 802 aa13.48□□□□□ -0.25
PTCD1-201ENST00000292478 ACOT2P49753 483 aa13.48□□□□□ -0.25
PTCD1-201ENST00000292478 SULT1E1P49888 294 aa13.48□□□□□ -0.25
PTCD1-201ENST00000292478 UGP2Q16851 508 aa13.48□□□□□ -0.25
PTCD1-201ENST00000292478 TRIML2Q8N7C3 387 aa13.48□□□□□ -0.25
PTCD1-201ENST00000292478 PPHLN1Q8NEY8 458 aaKnown RBP13.48□□□□□ -0.25
PTCD1-201ENST00000292478 AFG1LQ8WV93 481 aa13.48□□□□□ -0.25
PTCD1-201ENST00000292478 ANKS1AQ92625 1134 aa13.48□□□□□ -0.25
PTCD1-201ENST00000292478 DNAJC7Q99615 494 aa13.48□□□□□ -0.25
PTCD1-201ENST00000292478 SLC38A7Q9NVC3 462 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms