RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 ZNF568Q3ZCX4 644 aa12.06□□□□□ -0.48
NPC1L1-201ENST00000289547 EPM2AIP1Q7L775 607 aaPredicted RBP12.06□□□□□ -0.48
NPC1L1-201ENST00000289547 BEST2Q8NFU1 509 aa12.06□□□□□ -0.48
NPC1L1-201ENST00000289547 PRMT1Q99873 361 aaKnown RBP12.06□□□□□ -0.48
NPC1L1-201ENST00000289547 PHF20Q9BVI0 1012 aa12.06□□□□□ -0.48
NPC1L1-201ENST00000289547 SUCLA2Q9P2R7 463 aaPredicted RBP12.06□□□□□ -0.48
NPC1L1-201ENST00000289547 PABPN1LA6NDY0 278 aaKnown RBP12.06□□□□□ -0.48
NPC1L1-201ENST00000289547 WTIPA6NIX2 430 aaPredicted RBP12.06□□□□□ -0.48
NPC1L1-201ENST00000289547 STAG3L1P0CL83 205 aa12.06□□□□□ -0.48
NPC1L1-201ENST00000289547 CARSP49589 748 aaKnown RBP12.06□□□□□ -0.48
NPC1L1-201ENST00000289547 LAMB3Q13751 1172 aa12.06□□□□□ -0.48
NPC1L1-201ENST00000289547 RPS6KA2Q15349 733 aa12.06□□□□□ -0.48
NPC1L1-201ENST00000289547 GRIK5Q16478 980 aa12.06□□□□□ -0.48
NPC1L1-201ENST00000289547 ZNF746Q6NUN9 644 aaPredicted RBP12.06□□□□□ -0.48
NPC1L1-201ENST00000289547 PPP4R3CPQ6ZMV5 832 aa12.06□□□□□ -0.48
NPC1L1-201ENST00000289547 AMIGO3Q86WK7 504 aa12.06□□□□□ -0.48
NPC1L1-201ENST00000289547 HIC2Q96JB3 615 aa12.06□□□□□ -0.48
NPC1L1-201ENST00000289547 SMYD3Q9H7B4 428 aa12.06□□□□□ -0.48
NPC1L1-201ENST00000289547 XPNPEP3Q9NQH7 507 aa12.06□□□□□ -0.48
NPC1L1-201ENST00000289547 USP15Q9Y4E8 981 aaPredicted RBP12.06□□□□□ -0.48
NPC1L1-201ENST00000289547 GRID2IPA4D2P6 1211 aa12.06□□□□□ -0.48
NPC1L1-201ENST00000289547 CFAP69A5D8W1 941 aa12.06□□□□□ -0.48
NPC1L1-201ENST00000289547 CFLARO15519 480 aa12.06□□□□□ -0.48
NPC1L1-201ENST00000289547 RPS6KA5O75582 802 aa12.06□□□□□ -0.48
NPC1L1-201ENST00000289547 USP2O75604 605 aaPredicted RBP12.06□□□□□ -0.48
NPC1L1-201ENST00000289547 EEF1B2P24534 225 aaKnown RBP12.06□□□□□ -0.48
NPC1L1-201ENST00000289547 BPIFB4P59827 614 aa12.06□□□□□ -0.48
NPC1L1-201ENST00000289547 TROAPQ12815 778 aa12.06□□□□□ -0.48
NPC1L1-201ENST00000289547 ZNF579Q8NAF0 562 aaKnown RBP12.06□□□□□ -0.48
NPC1L1-201ENST00000289547 RUBCNQ92622 972 aa12.06□□□□□ -0.48
NPC1L1-201ENST00000289547 MKL1Q969V6 931 aa12.06□□□□□ -0.48
NPC1L1-201ENST00000289547 ZNF653Q96CK0 615 aa12.06□□□□□ -0.48
NPC1L1-201ENST00000289547 MS4A14Q96JA4 679 aa12.06□□□□□ -0.48
NPC1L1-201ENST00000289547 MTG1Q9BT17 334 aaPredicted RBP12.06□□□□□ -0.48
NPC1L1-201ENST00000289547 TRAIPQ9BWF2 469 aa12.06□□□□□ -0.48
NPC1L1-201ENST00000289547 EMILIN3Q9NT22 766 aa12.06□□□□□ -0.48
NPC1L1-201ENST00000289547 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.06□□□□□ -0.48
NPC1L1-201ENST00000289547 SMARCAL1Q9NZC9 954 aa12.06□□□□□ -0.48
NPC1L1-201ENST00000289547 AMACRQ9UHK6 382 aa12.06□□□□□ -0.48
NPC1L1-201ENST00000289547 ATP11BQ9Y2G3 1177 aa12.06□□□□□ -0.48
NPC1L1-201ENST00000289547 MAD1L1Q9Y6D9 718 aa12.06□□□□□ -0.48
NPC1L1-201ENST00000289547 ZNF233A6NK53 670 aa12.06□□□□□ -0.48
NPC1L1-201ENST00000289547 NVLO15381 856 aaKnown RBP12.06□□□□□ -0.48
NPC1L1-201ENST00000289547 GAS2O43903 313 aaKnown RBP12.06□□□□□ -0.48
NPC1L1-201ENST00000289547 OLFML2BQ68BL8 750 aa12.06□□□□□ -0.48
NPC1L1-201ENST00000289547 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.06□□□□□ -0.48
NPC1L1-201ENST00000289547 OXER1Q8TDS5 423 aa12.06□□□□□ -0.48
NPC1L1-201ENST00000289547 ARL8AQ96BM9 186 aa12.06□□□□□ -0.48
NPC1L1-201ENST00000289547 IGF2BP3O00425 579 aaKnown RBP eCLIP12.05□□□□□ -0.48
NPC1L1-201ENST00000289547 ABL1P00519 1130 aa12.05□□□□□ -0.48
NPC1L1-201ENST00000289547 SLC26A2P50443 739 aa12.05□□□□□ -0.48
NPC1L1-201ENST00000289547 EPHB1P54762 984 aa12.05□□□□□ -0.48
NPC1L1-201ENST00000289547 AP2B1P63010 937 aa12.05□□□□□ -0.48
NPC1L1-201ENST00000289547 CACNB1Q02641 598 aaPredicted RBP12.05□□□□□ -0.48
NPC1L1-201ENST00000289547 FAM110CQ1W6H9 321 aa12.05□□□□□ -0.48
NPC1L1-201ENST00000289547 SNRNP27Q8WVK2 155 aaKnown RBP12.05□□□□□ -0.48
NPC1L1-201ENST00000289547 RAD54LQ92698 747 aa12.05□□□□□ -0.48
NPC1L1-201ENST00000289547 NT5C1BQ96P26 610 aa12.05□□□□□ -0.48
NPC1L1-201ENST00000289547 TRIM56Q9BRZ2 755 aaKnown RBP12.05□□□□□ -0.48
NPC1L1-201ENST00000289547 MAP2K5Q13163 448 aa12.05□□□□□ -0.48
NPC1L1-201ENST00000289547 WDR93Q6P2C0 686 aa12.05□□□□□ -0.48
NPC1L1-201ENST00000289547 RGS9BPQ6ZS82 235 aa12.05□□□□□ -0.48
NPC1L1-201ENST00000289547 ARMCX2Q7L311 632 aa12.05□□□□□ -0.48
NPC1L1-201ENST00000289547 FAM186BQ8IYM0 893 aa12.05□□□□□ -0.48
NPC1L1-201ENST00000289547 PAPOLBQ9NRJ5 636 aaKnown RBP12.05□□□□□ -0.48
NPC1L1-201ENST00000289547 RGPD5Q99666 1765 aa12.05□□□□□ -0.48
NPC1L1-201ENST00000289547 SGK1O00141 431 aa12.05□□□□□ -0.48
NPC1L1-201ENST00000289547 CAPN9O14815 690 aa12.05□□□□□ -0.48
NPC1L1-201ENST00000289547 GNRH1P01148 92 aa12.05□□□□□ -0.48
NPC1L1-201ENST00000289547 PLS3P13797 630 aa12.05□□□□□ -0.48
NPC1L1-201ENST00000289547 SERPINB3P29508 390 aa12.05□□□□□ -0.48
NPC1L1-201ENST00000289547 OSTNP61366 133 aa12.05□□□□□ -0.48
NPC1L1-201ENST00000289547 ZNF484Q5JVG2 852 aa12.05□□□□□ -0.48
NPC1L1-201ENST00000289547 IQSEC1Q6DN90 963 aa12.05□□□□□ -0.48
NPC1L1-201ENST00000289547 FBXO16Q8IX29 292 aaPredicted RBP12.05□□□□□ -0.48
NPC1L1-201ENST00000289547 PRPF31Q8WWY3 499 aaKnown RBP12.05□□□□□ -0.48
NPC1L1-201ENST00000289547 TTC17Q96AE7 1141 aa12.05□□□□□ -0.48
NPC1L1-201ENST00000289547 CLMNQ96JQ2 1002 aa12.05□□□□□ -0.48
NPC1L1-201ENST00000289547 PXMP2Q9NR77 195 aa12.05□□□□□ -0.48
NPC1L1-201ENST00000289547 AAASQ9NRG9 546 aa12.05□□□□□ -0.48
NPC1L1-201ENST00000289547 KCNH7Q9NS40 1196 aa12.05□□□□□ -0.48
NPC1L1-201ENST00000289547 CHCHD3Q9NX63 227 aaKnown RBP12.05□□□□□ -0.48
NPC1L1-201ENST00000289547 CTSHP09668 335 aa12.05□□□□□ -0.48
NPC1L1-201ENST00000289547 ARPP19P56211 112 aa12.05□□□□□ -0.48
NPC1L1-201ENST00000289547 NR1I3Q14994 352 aa12.05□□□□□ -0.48
NPC1L1-201ENST00000289547 PCNX4Q63HM2 1172 aa12.05□□□□□ -0.48
NPC1L1-201ENST00000289547 DAGLBQ8NCG7 672 aa12.05□□□□□ -0.48
NPC1L1-201ENST00000289547 CCDC138Q96M89 665 aa12.05□□□□□ -0.48
NPC1L1-201ENST00000289547 EFHD1Q9BUP0 239 aa12.05□□□□□ -0.48
NPC1L1-201ENST00000289547 STK10O94804 968 aaKnown RBP12.04□□□□□ -0.48
NPC1L1-201ENST00000289547 NCF2P19878 526 aaPredicted RBP12.04□□□□□ -0.48
NPC1L1-201ENST00000289547 TCF7P36402 384 aaPredicted RBP12.04□□□□□ -0.48
NPC1L1-201ENST00000289547 MYL7Q01449 175 aa12.04□□□□□ -0.48
NPC1L1-201ENST00000289547 THNSL1Q8IYQ7 743 aa12.04□□□□□ -0.48
NPC1L1-201ENST00000289547 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.04□□□□□ -0.484e-6■■□□□ 13.6
NPC1L1-201ENST00000289547 RBM12Q9NTZ6 932 aaKnown RBP12.04□□□□□ -0.48
NPC1L1-201ENST00000289547 CCDC85CA6NKD9 419 aa12.04□□□□□ -0.48
NPC1L1-201ENST00000289547 TOM1L1O75674 476 aa12.04□□□□□ -0.48
NPC1L1-201ENST00000289547 EYA4O95677 639 aa12.04□□□□□ -0.48
NPC1L1-201ENST00000289547 MFAP3P55082 362 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms