RNA–Protein interactions for RNA: ENST00000288398.10

TPM1-202, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-202ENST00000288398 GPR152Q8TDT2 470 aa15.39■□□□□ 0.05
TPM1-202ENST00000288398 SHDQ96IW2 340 aa15.39■□□□□ 0.05
TPM1-202ENST00000288398 PPP1R10Q96QC0 940 aaKnown RBP15.39■□□□□ 0.05
TPM1-202ENST00000288398 ACO2Q99798 780 aaKnown RBP15.39■□□□□ 0.05
TPM1-202ENST00000288398 CDT1Q9H211 546 aa15.39■□□□□ 0.05
TPM1-202ENST00000288398 TBC1D17Q9HA65 648 aa15.39■□□□□ 0.05
TPM1-202ENST00000288398 ARHGEF3Q9NR81 526 aa15.39■□□□□ 0.05
TPM1-202ENST00000288398 MTRRQ9UBK8 725 aa15.39■□□□□ 0.05
TPM1-202ENST00000288398 CDY1Q9Y6F8 540 aa15.39■□□□□ 0.05
TPM1-202ENST00000288398 CACNA1HO95180 2353 aa15.39■□□□□ 0.05
TPM1-202ENST00000288398 PP2D1A8MPX8 630 aa15.38■□□□□ 0.05
TPM1-202ENST00000288398 PROB1E7EW31 1015 aa15.38■□□□□ 0.05
TPM1-202ENST00000288398 PRRG1O14668 218 aa15.38■□□□□ 0.05
TPM1-202ENST00000288398 PI15O43692 258 aa15.38■□□□□ 0.05
TPM1-202ENST00000288398 LRG1P02750 347 aa15.38■□□□□ 0.05
TPM1-202ENST00000288398 NPR3P17342 541 aa15.38■□□□□ 0.05
TPM1-202ENST00000288398 HTR4Q13639 388 aa15.38■□□□□ 0.05
TPM1-202ENST00000288398 ANGPT1Q15389 498 aa15.38■□□□□ 0.05
TPM1-202ENST00000288398 NAB2Q15742 525 aa15.38■□□□□ 0.05
TPM1-202ENST00000288398 UPP1Q16831 310 aa15.38■□□□□ 0.05
TPM1-202ENST00000288398 PABPC1LQ4VXU2 614 aaKnown RBP15.38■□□□□ 0.05
TPM1-202ENST00000288398 SPECC1Q5M775 1068 aa15.38■□□□□ 0.05
TPM1-202ENST00000288398 MPZL3Q6UWV2 235 aa15.38■□□□□ 0.05
TPM1-202ENST00000288398 FRMD5Q7Z6J6 570 aa15.38■□□□□ 0.05
TPM1-202ENST00000288398 TARS2Q9BW92 718 aaKnown RBP15.38■□□□□ 0.05
TPM1-202ENST00000288398 CXCL16Q9H2A7 254 aa15.38■□□□□ 0.05
TPM1-202ENST00000288398 GOLGA2P5Q9HBQ8 144 aa15.38■□□□□ 0.05
TPM1-202ENST00000288398 ANKFY1Q9P2R3 1169 aa15.38■□□□□ 0.05
TPM1-202ENST00000288398 BACE2Q9Y5Z0 518 aa15.38■□□□□ 0.05
TPM1-202ENST00000288398 ZFHX2Q9C0A1 2572 aaPredicted RBP15.38■□□□□ 0.05
TPM1-202ENST00000288398 ANHXE9PGG2 379 aa15.37■□□□□ 0.05
TPM1-202ENST00000288398 H0YCG3 227 aa15.37■□□□□ 0.05
TPM1-202ENST00000288398 H7C4K7 107 aa15.37■□□□□ 0.05
TPM1-202ENST00000288398 PODXLO00592 558 aa15.37■□□□□ 0.05
TPM1-202ENST00000288398 SLC16A4O15374 487 aa15.37■□□□□ 0.05
TPM1-202ENST00000288398 TKTP29401 623 aaKnown RBP15.37■□□□□ 0.05
TPM1-202ENST00000288398 CDC25AP30304 524 aa15.37■□□□□ 0.05
TPM1-202ENST00000288398 TOB1P50616 345 aaPredicted RBP15.37■□□□□ 0.05
TPM1-202ENST00000288398 ARPP19P56211 112 aa15.37■□□□□ 0.05
TPM1-202ENST00000288398 NTHL1P78549 312 aa15.37■□□□□ 0.05
TPM1-202ENST00000288398 RINT1Q6NUQ1 792 aa15.37■□□□□ 0.05
TPM1-202ENST00000288398 KCTD17Q8N5Z5 321 aa15.37■□□□□ 0.05
TPM1-202ENST00000288398 RASSF8Q8NHQ8 419 aa15.37■□□□□ 0.05
TPM1-202ENST00000288398 KCNG4Q8TDN1 519 aa15.37■□□□□ 0.05
TPM1-202ENST00000288398 FGF13Q92913 245 aa15.37■□□□□ 0.05
TPM1-202ENST00000288398 BICD1Q96G01 975 aa15.37■□□□□ 0.05
TPM1-202ENST00000288398 RUSC1Q9BVN2 902 aa15.37■□□□□ 0.05
TPM1-202ENST00000288398 SLC2A4RGQ9NR83 387 aa15.37■□□□□ 0.05
TPM1-202ENST00000288398 ARHGAP28Q9P2N2 729 aa15.37■□□□□ 0.05
TPM1-202ENST00000288398 MRPS23Q9Y3D9 190 aaKnown RBP15.37■□□□□ 0.05
TPM1-202ENST00000288398 SIT1Q9Y3P8 196 aa15.37■□□□□ 0.05
TPM1-202ENST00000288398 KRBA1A5PL33 1030 aa15.36■□□□□ 0.05
TPM1-202ENST00000288398 VWA3AA6NCI4 1184 aa15.36■□□□□ 0.05
TPM1-202ENST00000288398 I3L4J1 428 aa15.36■□□□□ 0.05
TPM1-202ENST00000288398 ADAM12O43184 909 aa15.36■□□□□ 0.05
TPM1-202ENST00000288398 POU2F2P09086 479 aa15.36■□□□□ 0.05
TPM1-202ENST00000288398 PLS3P13797 630 aa15.36■□□□□ 0.05
TPM1-202ENST00000288398 GUCY2CP25092 1073 aa15.36■□□□□ 0.05
TPM1-202ENST00000288398 RPL9P32969 192 aaKnown RBP15.36■□□□□ 0.05
TPM1-202ENST00000288398 BRCC3P46736 316 aa15.36■□□□□ 0.05
TPM1-202ENST00000288398 PFKPQ01813 784 aa15.36■□□□□ 0.05
TPM1-202ENST00000288398 RAD51AP2Q09MP3 1159 aa15.36■□□□□ 0.05
TPM1-202ENST00000288398 NOLC1Q14978 699 aaKnown RBP eCLIP15.36■□□□□ 0.05
TPM1-202ENST00000288398 ELMOD1Q8N336 334 aa15.36■□□□□ 0.05
TPM1-202ENST00000288398 CEP120Q8N960 986 aa15.36■□□□□ 0.05
TPM1-202ENST00000288398 SNX27Q96L92 541 aa15.36■□□□□ 0.05
TPM1-202ENST00000288398 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.36■□□□□ 0.05
TPM1-202ENST00000288398 KCND2Q9NZV8 630 aa15.36■□□□□ 0.05
TPM1-202ENST00000288398 KCNH3Q9ULD8 1083 aa15.36■□□□□ 0.05
TPM1-202ENST00000288398 MTCL1Q9Y4B5 1905 aaKnown RBP15.36■□□□□ 0.05
TPM1-202ENST00000288398 PRR23AA6NEV1 266 aa15.35■□□□□ 0.05
TPM1-202ENST00000288398 SFI1A8K8P3 1242 aa15.35■□□□□ 0.05
TPM1-202ENST00000288398 SYN3O14994 580 aa15.35■□□□□ 0.05
TPM1-202ENST00000288398 TOM1L1O75674 476 aa15.35■□□□□ 0.05
TPM1-202ENST00000288398 KCNE1P15382 129 aa15.35■□□□□ 0.05
TPM1-202ENST00000288398 MARCKSP29966 332 aaPredicted RBP15.35■□□□□ 0.05
TPM1-202ENST00000288398 MCM4P33991 863 aa15.35■□□□□ 0.05
TPM1-202ENST00000288398 ATP2C1P98194 919 aaPredicted RBP15.35■□□□□ 0.05
TPM1-202ENST00000288398 VARS2Q5ST30 1063 aaKnown RBP15.35■□□□□ 0.05
TPM1-202ENST00000288398 PHLDB3Q6NSJ2 640 aa15.35■□□□□ 0.05
TPM1-202ENST00000288398 ZC3H14Q6PJT7 736 aaKnown RBP15.35■□□□□ 0.05
TPM1-202ENST00000288398 PARM1Q6UWI2 310 aa15.35■□□□□ 0.05
TPM1-202ENST00000288398 C1orf186Q6ZWK4 172 aa15.35■□□□□ 0.05
TPM1-202ENST00000288398 ASCL5Q7RTU5 278 aa15.35■□□□□ 0.05
TPM1-202ENST00000288398 APPL2Q8NEU8 664 aa15.35■□□□□ 0.05
TPM1-202ENST00000288398 ST13P5Q8NFI4 369 aaPredicted RBP15.35■□□□□ 0.05
TPM1-202ENST00000288398 SPIRE2Q8WWL2 714 aa15.35■□□□□ 0.05
TPM1-202ENST00000288398 FGF14Q92915 247 aa15.35■□□□□ 0.05
TPM1-202ENST00000288398 CALML4Q96GE6 196 aa15.35■□□□□ 0.05
TPM1-202ENST00000288398 PLIN2Q99541 437 aa15.35■□□□□ 0.05
TPM1-202ENST00000288398 LARSQ9P2J5 1176 aaKnown RBP15.35■□□□□ 0.05
TPM1-202ENST00000288398 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.35■□□□□ 0.05
TPM1-202ENST00000288398 CLDN3O15551 220 aa15.34■□□□□ 0.05
TPM1-202ENST00000288398 GPC5P78333 572 aa15.34■□□□□ 0.05
TPM1-202ENST00000288398 CTXN3Q4LDR2 81 aa15.34■□□□□ 0.05
TPM1-202ENST00000288398 ZNF280DQ6N043 979 aa15.34■□□□□ 0.05
TPM1-202ENST00000288398 DAW1Q8N136 415 aa15.34■□□□□ 0.05
TPM1-202ENST00000288398 ZNF461Q8TAF7 563 aa15.34■□□□□ 0.05
TPM1-202ENST00000288398 ITFG1Q8TB96 612 aa15.34■□□□□ 0.05
TPM1-202ENST00000288398 ING5Q8WYH8 240 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms