RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 RABGEF1Q9UJ41 708 aa10.04□□□□□ -0.8
HMGN1-201ENST00000288344 KCNH3Q9ULD8 1083 aa10.04□□□□□ -0.8
HMGN1-201ENST00000288344 ANK1P16157 1881 aa10.03□□□□□ -0.8
HMGN1-201ENST00000288344 C2orf71A6NGG8 1288 aa10.03□□□□□ -0.8
HMGN1-201ENST00000288344 TISP43B9A030 160 aa10.03□□□□□ -0.8
HMGN1-201ENST00000288344 H0YCG3 227 aa10.03□□□□□ -0.8
HMGN1-201ENST00000288344 FAM13AO94988 1023 aa10.03□□□□□ -0.8
HMGN1-201ENST00000288344 CTSAP10619 480 aa10.03□□□□□ -0.8
HMGN1-201ENST00000288344 GAP43P17677 238 aa10.03□□□□□ -0.8
HMGN1-201ENST00000288344 IBSPP21815 317 aaPredicted RBP10.03□□□□□ -0.8
HMGN1-201ENST00000288344 CASP1P29466 404 aa10.03□□□□□ -0.8
HMGN1-201ENST00000288344 PPM1AP35813 382 aa10.03□□□□□ -0.8
HMGN1-201ENST00000288344 STAT6P42226 847 aa10.03□□□□□ -0.8
HMGN1-201ENST00000288344 ME1P48163 572 aa10.03□□□□□ -0.8
HMGN1-201ENST00000288344 KRT85P78386 507 aa10.03□□□□□ -0.8
HMGN1-201ENST00000288344 POU5F1Q01860 360 aaKnown RBP10.03□□□□□ -0.8
HMGN1-201ENST00000288344 TFF2Q03403 129 aa10.03□□□□□ -0.8
HMGN1-201ENST00000288344 GRIK3Q13003 919 aa10.03□□□□□ -0.8
HMGN1-201ENST00000288344 SNW1Q13573 536 aaKnown RBP10.03□□□□□ -0.8
HMGN1-201ENST00000288344 DUSP6Q16828 381 aa10.03□□□□□ -0.8
HMGN1-201ENST00000288344 TUSC1Q2TAM9 212 aa10.03□□□□□ -0.8
HMGN1-201ENST00000288344 TIGD5Q53EQ6 642 aa10.03□□□□□ -0.8
HMGN1-201ENST00000288344 FAM178BQ8IXR5 827 aa10.03□□□□□ -0.8
HMGN1-201ENST00000288344 GPR65Q8IYL9 337 aa10.03□□□□□ -0.8
HMGN1-201ENST00000288344 EFHBQ8N7U6 833 aa10.03□□□□□ -0.8
HMGN1-201ENST00000288344 ZNF507Q8TCN5 953 aa10.03□□□□□ -0.8
HMGN1-201ENST00000288344 TMEM174Q8WUU8 243 aa10.03□□□□□ -0.8
HMGN1-201ENST00000288344 HPS3Q969F9 1004 aa10.03□□□□□ -0.8
HMGN1-201ENST00000288344 DHX58Q96C10 678 aa10.03□□□□□ -0.8
HMGN1-201ENST00000288344 PAGE5Q96GU1 130 aa10.03□□□□□ -0.8
HMGN1-201ENST00000288344 ASB2Q96Q27 587 aa10.03□□□□□ -0.8
HMGN1-201ENST00000288344 GPR62Q9BZJ7 368 aa10.03□□□□□ -0.8
HMGN1-201ENST00000288344 GOLPH3LQ9H4A5 285 aa10.03□□□□□ -0.8
HMGN1-201ENST00000288344 NGRNQ9NPE2 291 aaKnown RBP10.03□□□□□ -0.8
HMGN1-201ENST00000288344 TLR9Q9NR96 1032 aa10.03□□□□□ -0.8
HMGN1-201ENST00000288344 CNTN3Q9P232 1028 aa10.03□□□□□ -0.8
HMGN1-201ENST00000288344 CACNG4Q9UBN1 327 aa10.03□□□□□ -0.8
HMGN1-201ENST00000288344 SERTAD1Q9UHV2 236 aa10.03□□□□□ -0.8
HMGN1-201ENST00000288344 CPSF3Q9UKF6 684 aaKnown RBP10.03□□□□□ -0.8
HMGN1-201ENST00000288344 COG5Q9UP83 839 aa10.03□□□□□ -0.8
HMGN1-201ENST00000288344 INPP5FQ9Y2H2 1132 aa10.03□□□□□ -0.8
HMGN1-201ENST00000288344 VWA8A3KMH1 1905 aa10.03□□□□□ -0.8
HMGN1-201ENST00000288344 A0A1B0GVL5 298 aa10.02□□□□□ -0.81
HMGN1-201ENST00000288344 PVALEFA0A1B0GWK0 134 aa10.02□□□□□ -0.81
HMGN1-201ENST00000288344 CARNS1A5YM72 827 aa10.02□□□□□ -0.81
HMGN1-201ENST00000288344 BHMG1C9JSJ3 638 aaPredicted RBP10.02□□□□□ -0.81
HMGN1-201ENST00000288344 TMEM189-UBE2V1I3L0A0 370 aa10.02□□□□□ -0.81
HMGN1-201ENST00000288344 LINC01565O15544 149 aa10.02□□□□□ -0.81
HMGN1-201ENST00000288344 TGFB1I1O43294 461 aa10.02□□□□□ -0.81
HMGN1-201ENST00000288344 ZC3H11AO75152 810 aaKnown RBP eCLIP10.02□□□□□ -0.81
HMGN1-201ENST00000288344 MYBP10242 640 aa10.02□□□□□ -0.81
HMGN1-201ENST00000288344 PFKFB1P16118 471 aa10.02□□□□□ -0.81
HMGN1-201ENST00000288344 NDUFV2P19404 249 aa10.02□□□□□ -0.81
HMGN1-201ENST00000288344 TXLNAP40222 546 aa10.02□□□□□ -0.81
HMGN1-201ENST00000288344 TNFSF9P41273 254 aa10.02□□□□□ -0.81
HMGN1-201ENST00000288344 NDUFA8P51970 172 aa10.02□□□□□ -0.81
HMGN1-201ENST00000288344 RBM10P98175 930 aaKnown RBP10.02□□□□□ -0.81
HMGN1-201ENST00000288344 TUSC3Q13454 348 aa10.02□□□□□ -0.81
HMGN1-201ENST00000288344 CUL4BQ13620 913 aa10.02□□□□□ -0.81
HMGN1-201ENST00000288344 ENOX2Q16206 610 aaKnown RBP10.02□□□□□ -0.81
HMGN1-201ENST00000288344 UPP1Q16831 310 aa10.02□□□□□ -0.81
HMGN1-201ENST00000288344 LEXMQ3ZCV2 418 aa10.02□□□□□ -0.81
HMGN1-201ENST00000288344 SEZ6Q53EL9 994 aa10.02□□□□□ -0.81
HMGN1-201ENST00000288344 THNSL1Q8IYQ7 743 aa10.02□□□□□ -0.81
HMGN1-201ENST00000288344 TMEM130Q8N3G9 435 aa10.02□□□□□ -0.81
HMGN1-201ENST00000288344 SLC17A8Q8NDX2 589 aa10.02□□□□□ -0.81
HMGN1-201ENST00000288344 C3orf58Q8NDZ4 430 aa10.02□□□□□ -0.81
HMGN1-201ENST00000288344 ZSWIM2Q8NEG5 633 aa10.02□□□□□ -0.81
HMGN1-201ENST00000288344 SLC22A17Q8WUG5 538 aa10.02□□□□□ -0.81
HMGN1-201ENST00000288344 PPM1EQ8WY54 764 aa10.02□□□□□ -0.81
HMGN1-201ENST00000288344 HLA-CQ95604 372 aa10.02□□□□□ -0.81
HMGN1-201ENST00000288344 HVCN1Q96D96 273 aa10.02□□□□□ -0.81
HMGN1-201ENST00000288344 SNX27Q96L92 541 aa10.02□□□□□ -0.81
HMGN1-201ENST00000288344 SPATA32Q96LK8 384 aa10.02□□□□□ -0.81
HMGN1-201ENST00000288344 ADPGKQ9BRR6 497 aa10.02□□□□□ -0.81
HMGN1-201ENST00000288344 S1PR5Q9H228 398 aa10.02□□□□□ -0.81
HMGN1-201ENST00000288344 UBE2ZQ9H832 354 aaPredicted RBP10.02□□□□□ -0.81
HMGN1-201ENST00000288344 PLEKHA5Q9HAU0 1116 aa10.02□□□□□ -0.81
HMGN1-201ENST00000288344 MAGEF1Q9HAY2 307 aa10.02□□□□□ -0.81
HMGN1-201ENST00000288344 RXFP1Q9HBX9 757 aa10.02□□□□□ -0.81
HMGN1-201ENST00000288344 GDPD2Q9HCC8 539 aa10.02□□□□□ -0.81
HMGN1-201ENST00000288344 PANK4Q9NVE7 773 aa10.02□□□□□ -0.81
HMGN1-201ENST00000288344 FAN1Q9Y2M0 1017 aa10.02□□□□□ -0.81
HMGN1-201ENST00000288344 TCF20Q9UGU0 1960 aaKnown RBP10.01□□□□□ -0.81
HMGN1-201ENST00000288344 OGTO15294 1046 aa10.01□□□□□ -0.81
HMGN1-201ENST00000288344 CLDN3O15551 220 aa10.01□□□□□ -0.81
HMGN1-201ENST00000288344 NCK2O43639 380 aa10.01□□□□□ -0.81
HMGN1-201ENST00000288344 TBC1D4O60343 1298 aa10.01□□□□□ -0.81
HMGN1-201ENST00000288344 TBX10O75333 385 aa10.01□□□□□ -0.81
HMGN1-201ENST00000288344 C1RP00736 705 aa10.01□□□□□ -0.81
HMGN1-201ENST00000288344 SOD2P04179 222 aa10.01□□□□□ -0.81
HMGN1-201ENST00000288344 THP07101 528 aa10.01□□□□□ -0.81
HMGN1-201ENST00000288344 CLTAP09496 248 aa10.01□□□□□ -0.81
HMGN1-201ENST00000288344 LIG1P18858 919 aa10.01□□□□□ -0.81
HMGN1-201ENST00000288344 ABCD1P33897 745 aa10.01□□□□□ -0.81
HMGN1-201ENST00000288344 WNT7BP56706 349 aa10.01□□□□□ -0.81
HMGN1-201ENST00000288344 MCCD1P59942 119 aaPredicted RBP10.01□□□□□ -0.81
HMGN1-201ENST00000288344 KRT17Q04695 432 aa10.01□□□□□ -0.81
HMGN1-201ENST00000288344 STRN3Q13033 797 aa10.01□□□□□ -0.81
HMGN1-201ENST00000288344 COASYQ13057 564 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms