RNA–Protein interactions for RNA: ENST00000286349.3

TRIM42-201, Transcript of tripartite motif containing 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM42, Length 2,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42-201ENST00000286349 XKR9Q5GH70 373 aa8.12□□□□□ -1.11
TRIM42-201ENST00000286349 DPY19L2P1Q6NXN4 242 aa8.12□□□□□ -1.11
TRIM42-201ENST00000286349 WDR93Q6P2C0 686 aa8.12□□□□□ -1.11
TRIM42-201ENST00000286349 ZNF572Q7Z3I7 529 aaPredicted RBP8.12□□□□□ -1.11
TRIM42-201ENST00000286349 RNF168Q8IYW5 571 aaPredicted RBP8.12□□□□□ -1.11
TRIM42-201ENST00000286349 DAW1Q8N136 415 aa8.12□□□□□ -1.11
TRIM42-201ENST00000286349 NDUFAF2Q8N183 169 aa8.12□□□□□ -1.11
TRIM42-201ENST00000286349 CAGE1Q8TC20 777 aa8.12□□□□□ -1.11
TRIM42-201ENST00000286349 EPAS1Q99814 870 aa8.12□□□□□ -1.11
TRIM42-201ENST00000286349 JPH2Q9BR39 696 aaPredicted RBP8.12□□□□□ -1.11
TRIM42-201ENST00000286349 CORO1BQ9BR76 489 aa8.12□□□□□ -1.11
TRIM42-201ENST00000286349 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.12□□□□□ -1.11
TRIM42-201ENST00000286349 STK33Q9BYT3 514 aa8.12□□□□□ -1.11
TRIM42-201ENST00000286349 DNAAF2Q9NVR5 837 aaKnown RBP8.12□□□□□ -1.11
TRIM42-201ENST00000286349 CYP39A1Q9NYL5 469 aa8.12□□□□□ -1.11
TRIM42-201ENST00000286349 PFASO15067 1338 aa8.12□□□□□ -1.11
TRIM42-201ENST00000286349 SLC25A27O95847 323 aa8.11□□□□□ -1.11
TRIM42-201ENST00000286349 RPSAP08865 295 aaKnown RBP8.11□□□□□ -1.11
TRIM42-201ENST00000286349 OAS2P29728 719 aaKnown RBP8.11□□□□□ -1.11
TRIM42-201ENST00000286349 ARHGEF6Q15052 776 aa8.11□□□□□ -1.11
TRIM42-201ENST00000286349 CWF19L1Q69YN2 538 aaKnown RBP8.11□□□□□ -1.11
TRIM42-201ENST00000286349 IRF2BP2Q7Z5L9 587 aa8.11□□□□□ -1.11
TRIM42-201ENST00000286349 MCPH1Q8NEM0 835 aa8.11□□□□□ -1.11
TRIM42-201ENST00000286349 SHCBP1Q8NEM2 672 aa8.11□□□□□ -1.11
TRIM42-201ENST00000286349 SPIRE2Q8WWL2 714 aa8.11□□□□□ -1.11
TRIM42-201ENST00000286349 OSBPL9Q96SU4 736 aa8.11□□□□□ -1.11
TRIM42-201ENST00000286349 CCDC68Q9H2F9 335 aa8.11□□□□□ -1.11
TRIM42-201ENST00000286349 JPH1Q9HDC5 661 aaPredicted RBP8.11□□□□□ -1.11
TRIM42-201ENST00000286349 SAGE1Q9NXZ1 904 aa8.11□□□□□ -1.11
TRIM42-201ENST00000286349 GJD2Q9UKL4 321 aa8.11□□□□□ -1.11
TRIM42-201ENST00000286349 ARIH1Q9Y4X5 557 aaPredicted RBP8.11□□□□□ -1.11
TRIM42-201ENST00000286349 BRCA2P51587 3418 aa8.11□□□□□ -1.11
TRIM42-201ENST00000286349 TBKBP1A7MCY6 615 aa8.11□□□□□ -1.11
TRIM42-201ENST00000286349 GPR25O00155 361 aa8.11□□□□□ -1.11
TRIM42-201ENST00000286349 ENC1O14682 589 aa8.11□□□□□ -1.11
TRIM42-201ENST00000286349 DGAT1O75907 488 aa8.11□□□□□ -1.11
TRIM42-201ENST00000286349 ERLIN2O94905 339 aa8.11□□□□□ -1.11
TRIM42-201ENST00000286349 ICAM3P32942 547 aa8.11□□□□□ -1.11
TRIM42-201ENST00000286349 PAFAH1B1P43034 410 aa8.11□□□□□ -1.11
TRIM42-201ENST00000286349 CYP2J2P51589 502 aa8.11□□□□□ -1.11
TRIM42-201ENST00000286349 MYL7Q01449 175 aa8.11□□□□□ -1.11
TRIM42-201ENST00000286349 CNTN2Q02246 1040 aa8.11□□□□□ -1.11
TRIM42-201ENST00000286349 SMC1AQ14683 1233 aaKnown RBP8.11□□□□□ -1.11
TRIM42-201ENST00000286349 STXBP2Q15833 593 aa8.11□□□□□ -1.11
TRIM42-201ENST00000286349 MIS18BP1Q6P0N0 1132 aa8.11□□□□□ -1.11
TRIM42-201ENST00000286349 NEK10Q6ZWH5 1172 aa8.11□□□□□ -1.11
TRIM42-201ENST00000286349 HAUS6Q7Z4H7 955 aa8.11□□□□□ -1.11
TRIM42-201ENST00000286349 GPR142Q7Z601 462 aa8.11□□□□□ -1.11
TRIM42-201ENST00000286349 XXYLT1Q8NBI6 393 aa8.11□□□□□ -1.11
TRIM42-201ENST00000286349 LMBR1Q8WVP7 490 aa8.11□□□□□ -1.11
TRIM42-201ENST00000286349 FGD4Q96M96 766 aa8.11□□□□□ -1.11
TRIM42-201ENST00000286349 NTPCRQ9BSD7 190 aaKnown RBP8.11□□□□□ -1.11
TRIM42-201ENST00000286349 OSBPL10Q9BXB5 764 aa8.11□□□□□ -1.11
TRIM42-201ENST00000286349 ANKZF1Q9H8Y5 726 aa8.11□□□□□ -1.11
TRIM42-201ENST00000286349 SIX2Q9NPC8 291 aa8.11□□□□□ -1.11
TRIM42-201ENST00000286349 KIAA1522Q9P206 1035 aaPredicted RBP8.11□□□□□ -1.11
TRIM42-201ENST00000286349 SLC9A2Q9UBY0 812 aa8.11□□□□□ -1.11
TRIM42-201ENST00000286349 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.11□□□□□ -1.11
TRIM42-201ENST00000286349 COL11A1P12107 1806 aaPredicted RBP8.11□□□□□ -1.11
TRIM42-201ENST00000286349 DNAJC25-GNG10A0A024R161 153 aa8.1□□□□□ -1.11
TRIM42-201ENST00000286349 A0A0A6YYK5 440 aaPredicted RBP8.1□□□□□ -1.11
TRIM42-201ENST00000286349 TMEM221A6NGB7 291 aa8.1□□□□□ -1.11
TRIM42-201ENST00000286349 SPATA31C2B4DYI2 1134 aa8.1□□□□□ -1.11
TRIM42-201ENST00000286349 CES2O00748 559 aa8.1□□□□□ -1.11
TRIM42-201ENST00000286349 BACH1O14867 736 aa8.1□□□□□ -1.11
TRIM42-201ENST00000286349 ATP9AO75110 1047 aa8.1□□□□□ -1.11
TRIM42-201ENST00000286349 MOCS3O95396 460 aa8.1□□□□□ -1.11
TRIM42-201ENST00000286349 CCNE2O96020 404 aa8.1□□□□□ -1.11
TRIM42-201ENST00000286349 PGK2P07205 417 aa8.1□□□□□ -1.11
TRIM42-201ENST00000286349 ACTN1P12814 892 aa8.1□□□□□ -1.11
TRIM42-201ENST00000286349 SOX5P35711 763 aa8.1□□□□□ -1.11
TRIM42-201ENST00000286349 PSMD7P51665 324 aa8.1□□□□□ -1.11
TRIM42-201ENST00000286349 VAMP7P51809 220 aa8.1□□□□□ -1.11
TRIM42-201ENST00000286349 LACTBP83111 547 aaPredicted RBP8.1□□□□□ -1.11
TRIM42-201ENST00000286349 SP3Q02447 781 aa8.1□□□□□ -1.11
TRIM42-201ENST00000286349 PTK2Q05397 1052 aa8.1□□□□□ -1.11
TRIM42-201ENST00000286349 SEPT7Q16181 437 aaKnown RBP8.1□□□□□ -1.11
TRIM42-201ENST00000286349 MORN1Q5T089 497 aa8.1□□□□□ -1.11
TRIM42-201ENST00000286349 FAM102BQ5T8I3 360 aa8.1□□□□□ -1.11
TRIM42-201ENST00000286349 MTHFD1LQ6UB35 978 aa8.1□□□□□ -1.11
TRIM42-201ENST00000286349 SLC7A5P1Q8MH63 180 aa8.1□□□□□ -1.11
TRIM42-201ENST00000286349 MAB21L3Q8N8X9 362 aa8.1□□□□□ -1.11
TRIM42-201ENST00000286349 FRS2Q8WU20 508 aa8.1□□□□□ -1.11
TRIM42-201ENST00000286349 ZNF296Q8WUU4 475 aaPredicted RBP8.1□□□□□ -1.11
TRIM42-201ENST00000286349 USP6NLQ92738 828 aa8.1□□□□□ -1.11
TRIM42-201ENST00000286349 MROH8Q9H579 483 aa8.1□□□□□ -1.11
TRIM42-201ENST00000286349 NRDE2Q9H7Z3 1164 aa8.1□□□□□ -1.11
TRIM42-201ENST00000286349 DCAF16Q9NXF7 216 aa8.1□□□□□ -1.11
TRIM42-201ENST00000286349 APEX2Q9UBZ4 518 aa8.1□□□□□ -1.11
TRIM42-201ENST00000286349 ADAMTS1Q9UHI8 967 aa8.1□□□□□ -1.11
TRIM42-201ENST00000286349 ZNF510Q9Y2H8 683 aa8.1□□□□□ -1.11
TRIM42-201ENST00000286349 USP20Q9Y2K6 914 aa8.1□□□□□ -1.11
TRIM42-201ENST00000286349 PCDHGC5Q9Y5F6 944 aa8.1□□□□□ -1.11
TRIM42-201ENST00000286349 SPO11Q9Y5K1 396 aa8.1□□□□□ -1.11
TRIM42-201ENST00000286349 CAPN6Q9Y6Q1 641 aa8.1□□□□□ -1.11
TRIM42-201ENST00000286349 DUSP10Q9Y6W6 482 aa8.1□□□□□ -1.11
TRIM42-201ENST00000286349 SOWAHBA6NEL2 793 aa8.1□□□□□ -1.11
TRIM42-201ENST00000286349 KDM1AO60341 852 aa8.1□□□□□ -1.11
TRIM42-201ENST00000286349 CLNS1AP54105 237 aaKnown RBP8.1□□□□□ -1.11
TRIM42-201ENST00000286349 SMUG1Q53HV7 270 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms