RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 COPS5Q92905 334 aa19.64■□□□□ 0.73
PDLIM3-201ENST00000284767 SLC10A4Q96EP9 437 aa19.64■□□□□ 0.73
PDLIM3-201ENST00000284767 FMO2Q99518 471 aa19.64■□□□□ 0.73
PDLIM3-201ENST00000284767 NTPCRQ9BSD7 190 aaKnown RBP19.64■□□□□ 0.73
PDLIM3-201ENST00000284767 KDM4CQ9H3R0 1056 aa19.64■□□□□ 0.73
PDLIM3-201ENST00000284767 DDX3XO00571 662 aaKnown RBP eCLIP19.63■□□□□ 0.73
PDLIM3-201ENST00000284767 EVI5O60447 810 aa19.63■□□□□ 0.73
PDLIM3-201ENST00000284767 TCF7P36402 384 aaPredicted RBP19.63■□□□□ 0.73
PDLIM3-201ENST00000284767 IFFO1Q0D2I5 559 aa19.63■□□□□ 0.73
PDLIM3-201ENST00000284767 MYBPC2Q14324 1141 aa19.63■□□□□ 0.73
PDLIM3-201ENST00000284767 CPLX4Q7Z7G2 160 aa19.63■□□□□ 0.73
PDLIM3-201ENST00000284767 SPIRE2Q8WWL2 714 aa19.63■□□□□ 0.73
PDLIM3-201ENST00000284767 MMP19Q99542 508 aa19.63■□□□□ 0.73
PDLIM3-201ENST00000284767 CENPFP49454 3210 aa19.63■□□□□ 0.73
PDLIM3-201ENST00000284767 HNRNPDLO14979 420 aaKnown RBP19.63■□□□□ 0.73
PDLIM3-201ENST00000284767 DRD4P21917 467 aa19.63■□□□□ 0.73
PDLIM3-201ENST00000284767 SCTRP47872 440 aa19.63■□□□□ 0.73
PDLIM3-201ENST00000284767 KCTD2Q14681 263 aa19.63■□□□□ 0.73
PDLIM3-201ENST00000284767 FASTKD5Q7L8L6 764 aaKnown RBP19.63■□□□□ 0.73
PDLIM3-201ENST00000284767 ARHGEF19Q8IW93 802 aa19.63■□□□□ 0.73
PDLIM3-201ENST00000284767 POMGNT1Q8WZA1 660 aa19.63■□□□□ 0.73
PDLIM3-201ENST00000284767 KAT5Q92993 513 aa19.63■□□□□ 0.73
PDLIM3-201ENST00000284767 APEX2Q9UBZ4 518 aa19.63■□□□□ 0.73
PDLIM3-201ENST00000284767 NCANO14594 1321 aa19.63■□□□□ 0.73
PDLIM3-201ENST00000284767 DCDC2CA8MYV0 355 aa19.62■□□□□ 0.73
PDLIM3-201ENST00000284767 SLC25A27O95847 323 aa19.62■□□□□ 0.73
PDLIM3-201ENST00000284767 OSBPP22059 807 aa19.62■□□□□ 0.73
PDLIM3-201ENST00000284767 PTENP60484 403 aa19.62■□□□□ 0.73
PDLIM3-201ENST00000284767 XRCC4Q13426 336 aa19.62■□□□□ 0.73
PDLIM3-201ENST00000284767 ERMARDQ5T6L9 678 aa19.62■□□□□ 0.73
PDLIM3-201ENST00000284767 CHMP6Q96FZ7 201 aa19.62■□□□□ 0.73
PDLIM3-201ENST00000284767 BICD1Q96G01 975 aa19.62■□□□□ 0.73
PDLIM3-201ENST00000284767 NAP1L3Q99457 506 aaPredicted RBP19.62■□□□□ 0.73
PDLIM3-201ENST00000284767 CELF4Q9BZC1 486 aaKnown RBP19.62■□□□□ 0.73
PDLIM3-201ENST00000284767 TMEM117Q9H0C3 514 aa19.62■□□□□ 0.73
PDLIM3-201ENST00000284767 PDGFCQ9NRA1 345 aa19.62■□□□□ 0.73
PDLIM3-201ENST00000284767 IGKV6D-21A0A0A0MT36 114 aa19.62■□□□□ 0.73
PDLIM3-201ENST00000284767 DNAJC8O75937 253 aaPredicted RBP19.62■□□□□ 0.73
PDLIM3-201ENST00000284767 FGGP02679 453 aa19.62■□□□□ 0.73
PDLIM3-201ENST00000284767 MAP2K1Q02750 393 aaPredicted RBP19.62■□□□□ 0.73
PDLIM3-201ENST00000284767 CLUL1Q15846 466 aa19.62■□□□□ 0.73
PDLIM3-201ENST00000284767 ATP8B4Q8TF62 1192 aa19.62■□□□□ 0.73
PDLIM3-201ENST00000284767 U2AF1L4Q8WU68 220 aaKnown RBP19.62■□□□□ 0.73
PDLIM3-201ENST00000284767 CCT6BQ92526 530 aa19.62■□□□□ 0.73
PDLIM3-201ENST00000284767 XPO6Q96QU8 1125 aaKnown RBP19.62■□□□□ 0.73
PDLIM3-201ENST00000284767 FAM129AQ9BZQ8 928 aa19.62■□□□□ 0.73
PDLIM3-201ENST00000284767 DPH5Q9H2P9 285 aa19.62■□□□□ 0.73
PDLIM3-201ENST00000284767 MCM8Q9UJA3 840 aa19.62■□□□□ 0.73
PDLIM3-201ENST00000284767 EXOC7Q9UPT5 735 aa19.62■□□□□ 0.73
PDLIM3-201ENST00000284767 NUDT17P0C025 328 aa19.61■□□□□ 0.73
PDLIM3-201ENST00000284767 GLRA2P23416 452 aa19.61■□□□□ 0.73
PDLIM3-201ENST00000284767 STAT5BP51692 787 aa19.61■□□□□ 0.73
PDLIM3-201ENST00000284767 GALCP54803 685 aa19.61■□□□□ 0.73
PDLIM3-201ENST00000284767 SNAPC2Q13487 334 aa19.61■□□□□ 0.73
PDLIM3-201ENST00000284767 SPRED3Q2MJR0 410 aa19.61■□□□□ 0.73
PDLIM3-201ENST00000284767 GIMAP7Q8NHV1 300 aa19.61■□□□□ 0.73
PDLIM3-201ENST00000284767 OLIG1Q8TAK6 271 aa19.61■□□□□ 0.73
PDLIM3-201ENST00000284767 IFT74Q96LB3 600 aa19.61■□□□□ 0.73
PDLIM3-201ENST00000284767 MAF1Q9H063 256 aa19.61■□□□□ 0.73
PDLIM3-201ENST00000284767 DHX33Q9H6R0 707 aaKnown RBP19.61■□□□□ 0.73
PDLIM3-201ENST00000284767 ARHGAP28Q9P2N2 729 aa19.61■□□□□ 0.73
PDLIM3-201ENST00000284767 LRRC37A2A6NM11 1700 aa19.61■□□□□ 0.73
PDLIM3-201ENST00000284767 DNAJC25-GNG10A0A024R161 153 aa19.61■□□□□ 0.73
PDLIM3-201ENST00000284767 SOX5P35711 763 aa19.61■□□□□ 0.73
PDLIM3-201ENST00000284767 STAT1P42224 750 aa19.61■□□□□ 0.73
PDLIM3-201ENST00000284767 SLC30A5Q8TAD4 765 aa19.61■□□□□ 0.73
PDLIM3-201ENST00000284767 RFFLQ8WZ73 363 aa19.61■□□□□ 0.73
PDLIM3-201ENST00000284767 STK33Q9BYT3 514 aa19.61■□□□□ 0.73
PDLIM3-201ENST00000284767 UBE2TQ9NPD8 197 aaPredicted RBP19.61■□□□□ 0.73
PDLIM3-201ENST00000284767 LRRIQ4A6NIV6 560 aa19.6■□□□□ 0.73
PDLIM3-201ENST00000284767 FOXN3O00409 490 aaPredicted RBP19.6■□□□□ 0.73
PDLIM3-201ENST00000284767 EDN1P05305 212 aa19.6■□□□□ 0.73
PDLIM3-201ENST00000284767 TMEM253P0C7T8 217 aa19.6■□□□□ 0.73
PDLIM3-201ENST00000284767 LNX1Q8TBB1 728 aaPredicted RBP19.6■□□□□ 0.73
PDLIM3-201ENST00000284767 SEMA4DQ92854 862 aa19.6■□□□□ 0.73
PDLIM3-201ENST00000284767 ZBTB10Q96DT7 871 aa19.6■□□□□ 0.73
PDLIM3-201ENST00000284767 CARD9Q9H257 536 aa19.6■□□□□ 0.73
PDLIM3-201ENST00000284767 C17orf75Q9HAS0 396 aa19.6■□□□□ 0.73
PDLIM3-201ENST00000284767 HAUS2Q9NVX0 235 aa19.6■□□□□ 0.73
PDLIM3-201ENST00000284767 ATP8A1Q9Y2Q0 1164 aa19.6■□□□□ 0.73
PDLIM3-201ENST00000284767 GOLGA6L10A0A0M3HER8 536 aa19.6■□□□□ 0.73
PDLIM3-201ENST00000284767 IQCA1LA6NCM1 817 aa19.6■□□□□ 0.73
PDLIM3-201ENST00000284767 FAM187AA6NFU0 413 aa19.6■□□□□ 0.73
PDLIM3-201ENST00000284767 ECM2O94769 699 aaPredicted RBP19.6■□□□□ 0.73
PDLIM3-201ENST00000284767 MXI1P50539 228 aa19.6■□□□□ 0.73
PDLIM3-201ENST00000284767 EPC2Q52LR7 807 aa19.6■□□□□ 0.73
PDLIM3-201ENST00000284767 GJC2Q5T442 439 aaPredicted RBP19.6■□□□□ 0.73
PDLIM3-201ENST00000284767 DUPD1Q68J44 220 aa19.6■□□□□ 0.73
PDLIM3-201ENST00000284767 METTL7BQ6UX53 244 aa19.6■□□□□ 0.73
PDLIM3-201ENST00000284767 GLYCTKQ8IVS8 523 aa19.6■□□□□ 0.73
PDLIM3-201ENST00000284767 TMEM174Q8WUU8 243 aa19.6■□□□□ 0.73
PDLIM3-201ENST00000284767 HVCN1Q96D96 273 aa19.6■□□□□ 0.73
PDLIM3-201ENST00000284767 ZBTB45Q96K62 511 aaPredicted RBP19.6■□□□□ 0.73
PDLIM3-201ENST00000284767 FAM213AQ9BRX8 229 aa19.6■□□□□ 0.73
PDLIM3-201ENST00000284767 DDX3YO15523 660 aaKnown RBP19.59■□□□□ 0.73
PDLIM3-201ENST00000284767 BUB1BO60566 1050 aaPredicted RBP19.59■□□□□ 0.73
PDLIM3-201ENST00000284767 DLATP10515 647 aaKnown RBP19.59■□□□□ 0.73
PDLIM3-201ENST00000284767 DR1Q01658 176 aa19.59■□□□□ 0.73
PDLIM3-201ENST00000284767 LMBRD2Q68DH5 695 aaPredicted RBP19.59■□□□□ 0.73
PDLIM3-201ENST00000284767 PALB2Q86YC2 1186 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms